Unsupervised Airway Tree Clustering with Deep Learning: the Multi-Ethnic Study of Atherosclerosis (Mesa) Lung Study

Sneha N. Naik, Elsa D. Angelini, R. Graham Barr, Norrina Allen, Alain Bertoni, Eric A. Hoffman, Ani Manichaikul, Jim Pankow, Wendy Post, Yifei Sun, Karol Watson, Benjamin M. Smith, Andrew F. Laine

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

High-resolution full lung CT scans now enable the detailed segmentation of airway trees up to the 6th branching generation. The airway binary masks display very complex tree structures that may encode biological information relevant to disease risk and yet remain challenging to exploit via traditional methods such as meshing or skeletonization. Recent clinical studies suggest that some variations in shape patterns and caliber of the human airway tree are highly associated with adverse health outcomes, including all-cause mortality and incident COPD. However, quantitative characterization of variations observed on CT segmented airway tree remain incomplete, as does our understanding of the clinical and developmental implications of such. In this work, we present an unsupervised deep-learning pipeline for feature extraction and clustering of human airway trees, learned directly from projections of 3D airway segmentations. We identify four reproducible and clinically distinct airway sub-types in the MESA Lung CT cohort.

Original languageEnglish (US)
Title of host publicationIEEE International Symposium on Biomedical Imaging, ISBI 2024 - Conference Proceedings
PublisherIEEE Computer Society
ISBN (Electronic)9798350313338
DOIs
StatePublished - 2024
Event21st IEEE International Symposium on Biomedical Imaging, ISBI 2024 - Athens, Greece
Duration: May 27 2024May 30 2024

Publication series

NameProceedings - International Symposium on Biomedical Imaging
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference21st IEEE International Symposium on Biomedical Imaging, ISBI 2024
Country/TerritoryGreece
CityAthens
Period5/27/245/30/24

Bibliographical note

Publisher Copyright:
© 2024 IEEE.

Keywords

  • Airway structure
  • Community Detection
  • Deep Learning
  • Lung CT

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