TheCellMap.org: A web-accessible database for visualizing and mining the global yeast genetic interaction network

Matej Usaj; Yizhao Tan; Wen Wang; Benjamin VanderSluis; Albert Zou; Chad L. Myers; Michael Costanzo; Brenda Andrews; Charles Boone

doi:10.1534/g3.117.040220

TheCellMap.org: A web-accessible database for visualizing and mining the global yeast genetic interaction network

Matej Usaj, Yizhao Tan, Wen Wang, Benjamin VanderSluis, Albert Zou, Chad L. Myers, Michael Costanzo, Brenda Andrews, Charles Boone

Research output: Contribution to journal › Article › peer-review

89 Scopus citations

Abstract

Providing access to quantitative genomic data is key to ensure large-scale data validation and promote new discoveries. TheCellMap.org serves as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) experiments with the budding yeast Saccharomyces cerevisiae. In particular, TheCellMap.org allows users to easily access, visualize, explore, and functionally annotate genetic interactions, or to extract and reorganize subnetworks, using data-driven network layouts in an intuitive and interactive manner.

Original language	English (US)
Pages (from-to)	1539-1549
Number of pages	11
Journal	G3: Genes, Genomes, Genetics
Volume	7
Issue number	5
DOIs	https://doi.org/10.1534/g3.117.040220
State	Published - May 1 2017

Bibliographical note

Publisher Copyright:
© 2017 Usaj et al.

Keywords

Genetic interactions
Genetic network
Synthetic genetic array SGA
Yeast genetics

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10.1534/g3.117.040220

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abstract = "Providing access to quantitative genomic data is key to ensure large-scale data validation and promote new discoveries. TheCellMap.org serves as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) experiments with the budding yeast Saccharomyces cerevisiae. In particular, TheCellMap.org allows users to easily access, visualize, explore, and functionally annotate genetic interactions, or to extract and reorganize subnetworks, using data-driven network layouts in an intuitive and interactive manner.",

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AU - Zou, Albert

AU - Myers, Chad L.

AU - Costanzo, Michael

AU - Andrews, Brenda

AU - Boone, Charles

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TheCellMap.org: A web-accessible database for visualizing and mining the global yeast genetic interaction network

Abstract

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