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Strengthening global-change science by integrating aeDNA with paleoecoinformatics

  • Contributing Authors

Research output: Contribution to journal › Review article › peer-review

Abstract

Ancient environmental DNA (aeDNA) data are close to enabling insights into past global-scale biodiversity dynamics at unprecedented taxonomic extent and resolution. However, achieving this potential requires solutions that bridge bioinformatics and paleoecoinformatics. Essential needs include support for dynamic taxonomic inferences, dynamic age inferences, and precise stratigraphic depth. Moreover, aeDNA data are complex and heterogeneous, generated by dispersed researcher networks, with methods advancing rapidly. Hence, expert community governance and curation are essential to building high-value data resources. Immediate recommendations include uploading metabarcoding-based taxonomic inventories into paleoecoinformatic resources, building linkages among open bioinformatic and paleoecoinformatic data resources, harmonizing aeDNA processing workflows, and expanding community data governance. These advances will enable transformative insights into global-scale biodiversity dynamics during large environmental and anthropogenic changes.

Original languageEnglish (US)
Pages (from-to)946-960
Number of pages15
JournalTrends in Ecology and Evolution
Volume38
Issue number10
DOIs
StatePublished - Oct 2023

Bibliographical note

Publisher Copyright:
© 2023 Elsevier Ltd

Keywords

  • ancient environmental DNA
  • community-curated data resources
  • global change ecology
  • metabarcoding
  • paleoecoinformatics

PubMed: MeSH publication types

  • Journal Article
  • Review
  • Research Support, U.S. Gov't, Non-P.H.S.

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