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Six artificial intelligence paradigms for tissue characterisation and classification of non-COVID-19 pneumonia against COVID-19 pneumonia in computed tomography lungs

  • Luca Saba
  • , Mohit Agarwal
  • , Anubhav Patrick
  • , Anudeep Puvvula
  • , Suneet K. Gupta
  • , Alessandro Carriero
  • , John R. Laird
  • , George D. Kitas
  • , Amer M. Johri
  • , Antonella Balestrieri
  • , Zeno Falaschi
  • , Alessio Paschè
  • , Vijay Viswanathan
  • , Ayman El-Baz
  • , Iqbal Alam
  • , Abhinav Jain
  • , Subbaram Naidu
  • , Ronald Oberleitner
  • , Narendra N. Khanna
  • , Arindam Bit
  • Mostafa Fatemi, Azra Alizad, Jasjit S. Suri

Research output: Contribution to journalArticlepeer-review

Abstract

Background: COVID-19 pandemic has currently no vaccines. Thus, the only feasible solution for prevention relies on the detection of COVID-19-positive cases through quick and accurate testing. Since artificial intelligence (AI) offers the powerful mechanism to automatically extract the tissue features and characterise the disease, we therefore hypothesise that AI-based strategies can provide quick detection and classification, especially for radiological computed tomography (CT) lung scans. Methodology: Six models, two traditional machine learning (ML)-based (k-NN and RF), two transfer learning (TL)-based (VGG19 and InceptionV3), and the last two were our custom-designed deep learning (DL) models (CNN and iCNN), were developed for classification between COVID pneumonia (CoP) and non-COVID pneumonia (NCoP). K10 cross-validation (90% training: 10% testing) protocol on an Italian cohort of 100 CoP and 30 NCoP patients was used for performance evaluation and bispectrum analysis for CT lung characterisation. Results: Using K10 protocol, our results showed the accuracy in the order of DL > TL > ML, ranging the six accuracies for k-NN, RF, VGG19, IV3, CNN, iCNN as 74.58 ± 2.44%, 96.84 ± 2.6, 94.84 ± 2.85%, 99.53 ± 0.75%, 99.53 ± 1.05%, and 99.69 ± 0.66%, respectively. The corresponding AUCs were 0.74, 0.94, 0.96, 0.99, 0.99, and 0.99 (p-values < 0.0001), respectively. Our Bispectrum-based characterisation system suggested CoP can be separated against NCoP using AI models. COVID risk severity stratification also showed a high correlation of 0.7270 (p < 0.0001) with clinical scores such as ground-glass opacities (GGO), further validating our AI models. Conclusions: We prove our hypothesis by demonstrating that all the six AI models successfully classified CoP against NCoP due to the strong presence of contrasting features such as ground-glass opacities (GGO), consolidations, and pleural effusion in CoP patients. Further, our online system takes < 2 s for inference.

Original languageEnglish (US)
Pages (from-to)423-434
Number of pages12
JournalInternational Journal of Computer Assisted Radiology and Surgery
Volume16
Issue number3
DOIs
StatePublished - Mar 2021

Bibliographical note

Publisher Copyright:
© 2021, CARS.

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Accuracy
  • Bispectrum
  • COVID-19
  • Computer tomography
  • Deep learning
  • Ground-glass opacities
  • Lung
  • Machine learning
  • Pandemic
  • Performance
  • Transfer learning
  • Validation

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