TY - JOUR
T1 - Relating trap capture to abundance
T2 - A hierarchical state-space model applied to black sea bass (Centropristis striata)
AU - Shertzer, Kyle W.
AU - Bacheler, Nathan M.
AU - Coggins, Lewis G.
AU - Fieberg, John
PY - 2016/1/1
Y1 - 2016/1/1
N2 - Traps are amongthe mostcommongears used to capture fish and crustaceans.Whentraps are deployed in surveys, the data gathered are often used to develop an index of abundance.However, trap catches are known to saturate over time for various reasons, such as space limitation of the gear or intraspecific interactions, and these features can dissociate the catch from local abundance. In this study, we develop a hierarchical state-space model of trap dynamics that is fit to data in a Bayesian framework. The model links trap catch to estimated local abundance, and additionally provides direct estimates of capture probability. For demonstration, we apply the model to data on black sea bass (Centropristis striata), which were collected using chevron traps combined with video cameras to give continuous-time observations of trap entries and exits. Results are consistent with the hypothesis that trap catch is generally proportional to local abundance. The model has potential application to surveys where animals not only enter a trap, but also may exit, such that the apparent trap saturation occurs because the system approaches equilibrium.
AB - Traps are amongthe mostcommongears used to capture fish and crustaceans.Whentraps are deployed in surveys, the data gathered are often used to develop an index of abundance.However, trap catches are known to saturate over time for various reasons, such as space limitation of the gear or intraspecific interactions, and these features can dissociate the catch from local abundance. In this study, we develop a hierarchical state-space model of trap dynamics that is fit to data in a Bayesian framework. The model links trap catch to estimated local abundance, and additionally provides direct estimates of capture probability. For demonstration, we apply the model to data on black sea bass (Centropristis striata), which were collected using chevron traps combined with video cameras to give continuous-time observations of trap entries and exits. Results are consistent with the hypothesis that trap catch is generally proportional to local abundance. The model has potential application to surveys where animals not only enter a trap, but also may exit, such that the apparent trap saturation occurs because the system approaches equilibrium.
KW - Abundance estimation
KW - Bayesian analysis
KW - Black sea bass
KW - Fish traps
UR - https://www.scopus.com/pages/publications/84964809425
UR - https://www.scopus.com/pages/publications/84964809425#tab=citedBy
U2 - 10.1093/icesjms/fsv197
DO - 10.1093/icesjms/fsv197
M3 - Article
AN - SCOPUS:84964809425
SN - 1054-3139
VL - 73
SP - 512
EP - 519
JO - ICES Journal of Marine Science
JF - ICES Journal of Marine Science
IS - 2
ER -