Reconstitution of microtubule-dependent organelle transport

Pradeep Barak, Ashim Rai, Alok Kumar Dubey, Priyanka Rai, Roop Mallik

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations

Abstract

Microtubule (MT)-based motor proteins transport many cellular factors to their functionally relevant locations within cells, and defects in transport are linked to human disease. Understanding the mechanism and regulation of this transport process in living cells is difficult because of the complex in vivo environment and limited means to manipulate the system. On the other hand, in vitro motility assays using purified motors attached to beads does not recapitulate the full complexity of cargo transport in vivo. Assaying motility of organelles in cell extracts is therefore attractive, as natural cargoes are being examined, but in an environment that is more amenable to manipulation. Here, we describe the purification and in vitro MT-based motility of phagosomes from Dictyostelium and lipid droplets from rat liver. These assays have the potential to address diverse questions related to endosome/phagosome maturation, fatty acid regulation, and could also serve as a starting point for reconstituting the motility of other types of organelles.

Original languageEnglish (US)
Title of host publicationReconstituting the Cytoskeleton
PublisherAcademic Press Inc.
Pages231-248
Number of pages18
ISBN (Print)9780123979247
DOIs
StatePublished - 2014

Publication series

NameMethods in Enzymology
Volume540
ISSN (Print)0076-6879
ISSN (Electronic)1557-7988

Bibliographical note

Funding Information:
R. M. acknowledges funding through an International Senior Research Fellowship from the Wellcome Trust UK (grant WT079214MA), and also a Wellcome Trust—Department of Biotechnology Alliance Senior Fellowship (grant IA/S/11/2500255).

Keywords

  • In vitro motility
  • Lipid droplets
  • Optical trap
  • Organelle motility
  • Phagosomes

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