Rapid detection, complete genome sequencing, and phylogenetic analysis of porcine deltacoronavirus

Douglas Marthaler, Lindsey Raymond, Yin Jiang, James Collins, Kurt Rossow, Albert Rovira

Research output: Contribution to journalArticlepeer-review

Abstract

In February 2014, porcine deltacoronavirus (PDCoV) was identified in the United States. We developed a PDCoV real-time reverse transcription PCR that identified PDCoV in 30% of samples tested. Four additional PDCoV genomes from the United States were sequenced; these had ≈99%-100% nt similarity to the other US PDCoV strains.

Original languageEnglish (US)
Pages (from-to)1347-1350
Number of pages4
JournalEmerging Infectious Diseases
Volume20
Issue number8
DOIs
StatePublished - Aug 1 2014

Keywords

  • phylogenetic analysis
  • Porcine deltacoronavirus
  • rRT-PCR
  • United States
  • viruses

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