Rapid and specific method for evaluating Streptomyces competitive dynamics in complex soil communities

Daniel C. Schlatter; Deborah A. Samac; Mesfin Tesfaye; Linda L. Kinkel

doi:10.1128/AEM.02320-09

Rapid and specific method for evaluating Streptomyces competitive dynamics in complex soil communities

Daniel C. Schlatter, Deborah A. Samac, Mesfin Tesfaye, Linda L. Kinkel

Plant Pathology

Research output: Contribution to journal › Article › peer-review

14 Scopus citations

Abstract

Quantifying target microbial populations in complex communities remains a barrier to studying species interactions in soil environments. Quantitative PCR (qPCR) assays were developed for quantifying pathogenic Streptomyces scabiei and antibiotic-producing Streptomyces lavendulae strains in complex soil communities. This assay will be useful for evaluating the competitive dynamics of streptomycetes in soil.

Original language	English (US)
Pages (from-to)	2009-2012
Number of pages	4
Journal	Applied and environmental microbiology
Volume	76
Issue number	6
DOIs	https://doi.org/10.1128/AEM.02320-09
State	Published - Mar 2010

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title = "Rapid and specific method for evaluating Streptomyces competitive dynamics in complex soil communities",

abstract = "Quantifying target microbial populations in complex communities remains a barrier to studying species interactions in soil environments. Quantitative PCR (qPCR) assays were developed for quantifying pathogenic Streptomyces scabiei and antibiotic-producing Streptomyces lavendulae strains in complex soil communities. This assay will be useful for evaluating the competitive dynamics of streptomycetes in soil.",

author = "Schlatter, \{Daniel C.\} and Samac, \{Deborah A.\} and Mesfin Tesfaye and Kinkel, \{Linda L.\}",

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AU - Schlatter, Daniel C.

AU - Samac, Deborah A.

AU - Tesfaye, Mesfin

AU - Kinkel, Linda L.

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N2 - Quantifying target microbial populations in complex communities remains a barrier to studying species interactions in soil environments. Quantitative PCR (qPCR) assays were developed for quantifying pathogenic Streptomyces scabiei and antibiotic-producing Streptomyces lavendulae strains in complex soil communities. This assay will be useful for evaluating the competitive dynamics of streptomycetes in soil.

AB - Quantifying target microbial populations in complex communities remains a barrier to studying species interactions in soil environments. Quantitative PCR (qPCR) assays were developed for quantifying pathogenic Streptomyces scabiei and antibiotic-producing Streptomyces lavendulae strains in complex soil communities. This assay will be useful for evaluating the competitive dynamics of streptomycetes in soil.

UR - https://www.scopus.com/pages/publications/77749303986

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M3 - Article

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AN - SCOPUS:77749303986

SN - 0099-2240

VL - 76

SP - 2009

EP - 2012

JO - Applied and environmental microbiology

JF - Applied and environmental microbiology

IS - 6

ER -

Rapid and specific method for evaluating Streptomyces competitive dynamics in complex soil communities

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