Quantitative analysis of spatial averaging effect on chemical shift imaging SNR and noise coherence with k-space sampling schemes

Byeong Yeul Lee, Xiao Hong Zhu, Wei Chen

Research output: Contribution to journalArticlepeer-review

3 Scopus citations

Abstract

Spatial averaging of multiple voxels from high-resolution chemical shift imaging (hrCSI) is a common strategy for in vivo metabolic studies to achieve a better signal-to-noise ratio (SNR) for a region-of-interest. However, the mechanism about how the spatial averaging approach influences the respective spectral signal and noise and its relevance to the k-space sampling schemes remains unclear. Using three-dimension 17O CSI technique with the weighted k-space sampling method of Fourier series window, we performed quantitative SNR comparisons between a single low-resolution CSI (lrCSI) voxel (being 27 times larger than the hrCSI voxel size) and the spatially averaged hrCSI voxels with matched sampling volume and location. We demonstrated that the averaged hrCSI voxel spectrum had a large SNR loss (> 4 times) compared to the lrCSI voxel, which was resulted from unmatched increases in signal (~1.9 fold) and noise (~9.3 fold). The signal increase was caused by the spatial overlapping between the adjacent hrCSI voxels. The substantial noise increase was mainly attributed to the strong noise coherence among hrCSI voxels acquired with the weighted k-space sampling. This study presents a quantitative relation between the k-space sampling schemes to an apparent SNR penalty of the spatial averaging approach. The information could be useful for designing CSI acquisition method and determination of optimal spatial resolution for in vivo metabolic imaging studies.

Original languageEnglish (US)
Pages (from-to)85-92
Number of pages8
JournalMagnetic Resonance Imaging
Volume60
DOIs
StatePublished - Jul 2019

Bibliographical note

Funding Information:
This work was supported by NIH Grants RO1 NS057560, NS070839 and MH111413, U01 EB026978, R24 MH106049, S10 RR026783, P41 EB015894, and P30 NS076408; and the W.M. Keck Foundation. The authors thank Hannes M. Wiesner for technical support and assistance. The authors declare no conflict of interest.

Funding Information:
This work was supported by NIH Grants RO1 NS057560 , NS070839 and MH111413 , U01 EB026978 , R24 MH106049 , S10 RR026783 , P41 EB015894 , and P30 NS076408 ; and the W.M. Keck Foundation . The authors thank Hannes M. Wiesner for technical support and assistance.

Publisher Copyright:
© 2019 Elsevier Inc.

Keywords

  • Chemical shift imaging
  • Noise coherence
  • Point-spread function
  • Signal-to-noise ratio (SNR)
  • Spatial averaging
  • k-space sampling

Fingerprint

Dive into the research topics of 'Quantitative analysis of spatial averaging effect on chemical shift imaging SNR and noise coherence with k-space sampling schemes'. Together they form a unique fingerprint.

Cite this