Octamer independent activation of transcription from the kappa immunoglobulin germline promoter

Anila Prabhu, Darin P. O'Brien, Georgia L. Weisner, Regan Fulton, Brian Van Ness

Research output: Contribution to journalArticlepeer-review

7 Scopus citations


Previous analyses of immunoglobulin V region promoters has led to the discovery of a common octamer motif which is functionally important in the tissue-specific and developmentally regulated transcriptional activation of immunoglobulin genes. The germline promoters (K(o)) located upstream of the J region gene segments of the kappa locus also contain an octamer motif (containing a single base pair mutation and referred to as the variant octamer) which has been shown previously to bind Oct-1 and Oct-2 transcription factors in vitro. To further elucidate the role of this variant octamer motif in the regulation of germline transcription from the unrearranged kappa locus, we have quantitated the relative binding affinity of Oct-1 and Oct-2 for the variant octamer motif and determined the functional role of this octamer motif in transcriptional activation. We find that, although the variant octamer motif binds Oct-1 and Oct-2 in vitro with 5-fold lower affinity than the consensus octamer motif, mutation of the variant octamer motif to either a consensus octamer or non-octamer motif has no effect on transcriptional activation from the germline promoter. We also find significant differences in activation of germline and V region promoters by kappa enhancers. Our results suggest that the germline promoters and V region promoters differ in their dependence on octamer for activation and respond differently to enhancer activation. These findings have important implications in regulation of germline transcription as well as concomitant activation of the V-J recombination of the kappa light chain locus.

Original languageEnglish (US)
Pages (from-to)4805-4811
Number of pages7
JournalNucleic acids research
Issue number23
StatePublished - 1996

Bibliographical note

Funding Information:
We thank Dr Eugene Oltz (Vanderbilt University) for pre B cell line 38B9. This work was supported by NIH Grant GM37687.


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