Abstract
Cluster analysis is an unsupervised learning strategy that is exceptionally useful for identifying homogeneous subgroups of observations in data sets of unknown structure. However, it is challenging to determine if the identified clusters represent truly distinct subgroups rather than noise. Existing approaches for addressing this problem tend to define clusters based on distributional assumptions, ignore the inherent correlation structure in the data, or are not suited for high-dimension low-sample size (HDLSS) settings. In this paper, we propose a novel method to evaluate the significance of identified clusters by comparing the explained variation due to the clustering from the original data to that produced by clustering a unimodal reference distribution that preserves the covariance structure in the data. The reference distribution is generated using kernel density estimation, and thus, does not require that the data follow a particular distribution. By utilizing sparse covariance estimation, the method is adapted for the HDLSS setting. The approach can be used to test the null hypothesis that the data cannot be partitioned into clusters and to determine the optimal number of clusters. Simulation examples, theoretical evaluations, and applications to temporomandibular disorder research and cancer microarray data illustrate the utility of the proposed method.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 1215-1226 |
| Number of pages | 12 |
| Journal | Biometrics |
| Volume | 77 |
| Issue number | 4 |
| Early online date | Sep 23 2020 |
| DOIs | |
| State | Published - Dec 2021 |
Bibliographical note
Funding Information:ESH was supported by the National Science Foundation Graduate Research Fellowship under Grant No.DGE‐1144081. EB was supported by NIH/NIDCR grant R03DE023592, NIH/NCATS grant UL1RR025747, and NIH/NIEHS grant P03ES010126.
Publisher Copyright:
© 2020 The International Biometric Society
UN SDGs
This output contributes to the following UN Sustainable Development Goals (SDGs)
-
SDG 3 Good Health and Well-being
Fingerprint
Dive into the research topics of 'Nonparametric cluster significance testing with reference to a unimodal null distribution'. Together they form a unique fingerprint.Cite this
- APA
- Standard
- Harvard
- Vancouver
- Author
- BIBTEX
- RIS