Non-Cartesian Self-Supervised Physics-Driven Deep Learning Reconstruction for Highly-Accelerated Multi-Echo Spiral fMRI

Hongyi Gu, Chi Zhang, Zidan Yu, Christoph Rettenmeier, V. Andrew Stenger, Mehmet Akcakaya

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Functional MRI (fMRI) is an important tool for non-invasive studies of brain function. Over the past decade, multi-echo fMRI methods that sample multiple echo times has become popular with potential to improve quantification. While these acquisitions are typically performed with Cartesian trajectories, non-Cartesian trajectories, in particular spiral acquisitions, hold promise for denser sampling of echo times. However, such acquisitions require very high acceleration rates for sufficient spatiotemporal resolutions. In this work, we propose to use a physics-driven deep learning (PD-DL) reconstruction to accelerate multi-echo spiral fMRI by 10-fold. We modify a self-supervised learning algorithm for optimized training with non-Cartesian trajectories and use it to train the PD-DL network. Results show that the proposed self-supervised PD-DL reconstruction achieves high spatio-temporal resolution with meaningful BOLD analysis.

Original languageEnglish (US)
Title of host publicationIEEE International Symposium on Biomedical Imaging, ISBI 2024 - Conference Proceedings
PublisherIEEE Computer Society
ISBN (Electronic)9798350313338
DOIs
StatePublished - 2024
Event21st IEEE International Symposium on Biomedical Imaging, ISBI 2024 - Athens, Greece
Duration: May 27 2024May 30 2024

Publication series

NameProceedings - International Symposium on Biomedical Imaging
ISSN (Print)1945-7928
ISSN (Electronic)1945-8452

Conference

Conference21st IEEE International Symposium on Biomedical Imaging, ISBI 2024
Country/TerritoryGreece
CityAthens
Period5/27/245/30/24

Bibliographical note

Publisher Copyright:
© 2024 IEEE.

Keywords

  • fast MRI
  • multi-echo fMRI
  • non-Cartesian MRI
  • self-supervised learning

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