Moving beyond de novo clustering in fungal community ecology

Lauren C. Cline, Zewei Song, Gabriel A. Al-Ghalith, Dan Knights, Peter G Kennedy

Research output: Contribution to journalLetter

8 Citations (Scopus)
Original languageEnglish (US)
Pages (from-to)629-634
Number of pages6
JournalThe New phytologist
Volume216
Issue number3
DOIs
StatePublished - Nov 1 2017

Fingerprint

Soil Microbiology
soil biology
High-Throughput Nucleotide Sequencing
Plant Leaves
community ecology
fungal communities
Ecology
Cluster Analysis
cluster analysis
Fungi
ecology
fungi
Forests
Mycobiome
high-throughput nucleotide sequencing

Keywords

  • closed reference
  • community analysis
  • de novo
  • diversity
  • fungi
  • open reference
  • operational taxonomic unit (OTU) clustering

Cite this

Moving beyond de novo clustering in fungal community ecology. / Cline, Lauren C.; Song, Zewei; Al-Ghalith, Gabriel A.; Knights, Dan; Kennedy, Peter G.

In: The New phytologist, Vol. 216, No. 3, 01.11.2017, p. 629-634.

Research output: Contribution to journalLetter

Cline, Lauren C. ; Song, Zewei ; Al-Ghalith, Gabriel A. ; Knights, Dan ; Kennedy, Peter G. / Moving beyond de novo clustering in fungal community ecology. In: The New phytologist. 2017 ; Vol. 216, No. 3. pp. 629-634.
@article{bd5f666efd06416c9751eaacb84b8160,
title = "Moving beyond de novo clustering in fungal community ecology",
keywords = "closed reference, community analysis, de novo, diversity, fungi, open reference, operational taxonomic unit (OTU) clustering",
author = "Cline, {Lauren C.} and Zewei Song and Al-Ghalith, {Gabriel A.} and Dan Knights and Kennedy, {Peter G}",
year = "2017",
month = "11",
day = "1",
doi = "10.1111/nph.14752",
language = "English (US)",
volume = "216",
pages = "629--634",
journal = "New Phytologist",
issn = "0028-646X",
publisher = "Wiley-Blackwell",
number = "3",

}

TY - JOUR

T1 - Moving beyond de novo clustering in fungal community ecology

AU - Cline, Lauren C.

AU - Song, Zewei

AU - Al-Ghalith, Gabriel A.

AU - Knights, Dan

AU - Kennedy, Peter G

PY - 2017/11/1

Y1 - 2017/11/1

KW - closed reference

KW - community analysis

KW - de novo

KW - diversity

KW - fungi

KW - open reference

KW - operational taxonomic unit (OTU) clustering

UR - http://www.scopus.com/inward/record.url?scp=85040712702&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85040712702&partnerID=8YFLogxK

U2 - 10.1111/nph.14752

DO - 10.1111/nph.14752

M3 - Letter

C2 - 28782807

AN - SCOPUS:85040712702

VL - 216

SP - 629

EP - 634

JO - New Phytologist

JF - New Phytologist

SN - 0028-646X

IS - 3

ER -