TY - GEN
T1 - Inference of Poisson count processes using low-rank tensor data
AU - Bazerque, Juan Andres
AU - Mateos, Gonzalo
AU - Giannakis, Georgios B
PY - 2013/10/18
Y1 - 2013/10/18
N2 - A novel regularizer capturing the tensor rank is introduced in this paper as the key enabler for completion of three-way data arrays with missing entries. The novel regularized imputation approach induces sparsity in the factors of the tensor's PARAFAC decomposition, thus reducing its rank. The focus is on count processes which emerge in diverse applications ranging from genomics to computer and social networking. Based on Poisson count data, a maximum aposteriori (MAP) estimator is developed using the Kullback-Leibler divergence criterion. This probabilistic approach also facilitates incorporation of correlated priors regularizing the rank, while endowing the tensor imputation method with extra smoothing and prediction capabilities. Tests on simulated and real datasets corroborate the sparsifying regularization effect, and demonstrate recovery of 15% missing RNA-sequencing data with an inference error of -12dB.
AB - A novel regularizer capturing the tensor rank is introduced in this paper as the key enabler for completion of three-way data arrays with missing entries. The novel regularized imputation approach induces sparsity in the factors of the tensor's PARAFAC decomposition, thus reducing its rank. The focus is on count processes which emerge in diverse applications ranging from genomics to computer and social networking. Based on Poisson count data, a maximum aposteriori (MAP) estimator is developed using the Kullback-Leibler divergence criterion. This probabilistic approach also facilitates incorporation of correlated priors regularizing the rank, while endowing the tensor imputation method with extra smoothing and prediction capabilities. Tests on simulated and real datasets corroborate the sparsifying regularization effect, and demonstrate recovery of 15% missing RNA-sequencing data with an inference error of -12dB.
KW - Poisson processes
KW - Tensor
KW - low-rank
KW - missing data
UR - http://www.scopus.com/inward/record.url?scp=84890538084&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84890538084&partnerID=8YFLogxK
U2 - 10.1109/ICASSP.2013.6638814
DO - 10.1109/ICASSP.2013.6638814
M3 - Conference contribution
AN - SCOPUS:84890538084
SN - 9781479903566
T3 - ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings
SP - 5989
EP - 5993
BT - 2013 IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2013 - Proceedings
T2 - 2013 38th IEEE International Conference on Acoustics, Speech, and Signal Processing, ICASSP 2013
Y2 - 26 May 2013 through 31 May 2013
ER -