Homology modeling and analysis of structure predictions of the bovine rhinitis B virus RNA dependent RNA polymerase (RdRp)

Keyphrases

• Structure Analysis 100%
• RNA-dependent RNA Polymerase (RdRP) 100%
• Virus RNA 100%
• Homology Modeling 100%
• Structure Modeling 100%
• Structure Prediction 100%
• Infectious Bovine Rhinotracheitis Virus 100%
• Homology Analysis 100%
• 3D Polymerase 100%
• Foot-and-mouth Disease Virus 50%
• Phylogenetic Analysis 20%
• Template-primer 20%
• Aphthovirus 20%
• Polymerase Structure 20%
• Stereochemical Hypothesis 20%
• Computational Tools 10%
• Cattle 10%
• Molecular Targets 10%
• Drug Design 10%
• Structure Function 10%
• 3D Structure 10%
• Close Relatives 10%
• Positively Charged 10%
• Binding Site 10%
• Active Sites 10%
• Overall Structure 10%
• Close Proximity 10%
• Helix 10%
• Pyrophosphate 10%
• Site Structure 10%
• Respiratory Infection 10%
• Nucleic Acid Binding 10%
• Noncovalent Interactions 10%
• Picornavirus 10%
• Polyprotein 10%
• Salt Bridge 10%
• Sequence Prediction 10%
• Human Rhinovirus 10%
• Root Mean Square Deviation 10%
• Nucleotide Triphosphate 10%
• Sequence-structure Alignment 10%
• Rabbit Hemorrhagic Disease Virus 10%
• Physiological Requirement 10%
• Analysis Structure 10%
• Swiss Cheese Model 10%
• 3Dpol 10%
• CH-π Interaction 10%
• High-score 10%
• Bound Foot 10%

Biochemistry, Genetics and Molecular Biology

• Structure Prediction 100%
• Polymerase 100%
• Homology Modeling 100%
• RNA-dependent RNA Polymerase 100%
• Foot and Mouth Disease Virus 45%
• Crystal Structure 18%
• DNA Template 18%
• Aphthovirus 18%
• Cladistics 18%
• Structure Analysis 9%
• Active Site 9%
• Nucleic Acid Binding 9%
• Binding Site 9%
• C-Terminus 9%
• Sequence Alignment 9%
• Picornaviridae 9%
• Human Rhinovirus A16 9%
• Rabbit Hemorrhagic Disease Virus 9%
• Pyrophosphate 9%

Pharmacology, Toxicology and Pharmaceutical Science

• Rhinitis 100%
• RNA Directed RNA Polymerase 100%
• Virus RNA 100%
• Foot and Mouth Disease Virus 55%
• Aphthovirus 22%
• Drug Development 11%
• Molecular Target 11%
• Pyrophosphate 11%
• Non-Covalent Interactions 11%
• Binding Site 11%
• Nucleic Acid 11%
• Picornaviridae 11%
• Human Rhinovirus A16 11%
• Rabbit Hemorrhagic Disease Virus 11%
• Respiratory Tract Infection 11%
• Polyprotein 11%