High-quality draft genome sequence of Thermocrinis jamiesonii GBS1T isolated from Great Boiling Spring, Nevada

Rakesh Ganji; Senthil K. Murugapiran; John C. Ong; Namritha Manoharan; Marcel Huntemann; Alicia Clum; Manoj Pillay; Krishnaveni Palaniappan; Neha Varghese; Natalia Mikhailova; Dimitrios Stamatis; T. B.K. Reddy; Chew Yee Ngan; Chris Daum; Kecia Duffy; Nicole Shapiro; Victor Markowitz; Natalia Ivanova; Nikos Kyrpides; Tanja Woyke; Jeremy A. Dodsworth; Brian P. Hedlund

doi:10.1128/genomeA.01112-16

High-quality draft genome sequence of Thermocrinis jamiesonii GBS1^T isolated from Great Boiling Spring, Nevada

Rakesh Ganji, Senthil K. Murugapiran, John C. Ong, Namritha Manoharan, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, T. B.K. Reddy, Chew Yee Ngan, Chris Daum, Kecia Duffy, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Nikos Kyrpides, Tanja WoykeJeremy A. Dodsworth, Brian P. Hedlund

Plant and Microbial Biology

Research output: Contribution to journal › Article › peer-review

Abstract

The draft genome of Thermocrinis jamiesonii GBS1^T is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability to use carbohydrate polymers.

Original language	English (US)
Article number	e01112-16
Journal	Genome Announcements
Volume	4
Issue number	5
DOIs	https://doi.org/10.1128/genomeA.01112-16
State	Published - 2016

Bibliographical note

Funding Information:
This work, including the efforts of Rakesh Ganji, Senthil K. Murugapiran, John C. Ong, Namritha Manoharan, Jeremy A. Dodsworth, and Brian P. Hedlund, was funded by National Science Foundation (NSF) (OISE-0968421). This work, including the efforts of Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishna Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, Tatiparthi Reddy, Chew Ngan, Chris Daum, Kecia Duffy, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Nikos C. Kyrpides, and Tanja Woyke, was funded by U.S. Department of Energy (DOE) (DE-AC02-05CH11231).

Publisher Copyright:
© 2016 Ganji et al.

Publisher link

10.1128/genomeA.01112-16

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Ganji, R., Murugapiran, S. K., Ong, J. C., Manoharan, N., Huntemann, M., Clum, A., Pillay, M., Palaniappan, K., Varghese, N., Mikhailova, N., Stamatis, D., Reddy, T. B. K., Ngan, C. Y., Daum, C., Duffy, K., Shapiro, N., Markowitz, V., Ivanova, N., Kyrpides, N., ... Hedlund, B. P. (2016). High-quality draft genome sequence of Thermocrinis jamiesonii GBS1^T isolated from Great Boiling Spring, Nevada. Genome Announcements, 4(5), [e01112-16]. https://doi.org/10.1128/genomeA.01112-16

Ganji, R, Murugapiran, SK, Ong, JC, Manoharan, N, Huntemann, M, Clum, A, Pillay, M, Palaniappan, K, Varghese, N, Mikhailova, N, Stamatis, D, Reddy, TBK, Ngan, CY, Daum, C, Duffy, K, Shapiro, N, Markowitz, V, Ivanova, N, Kyrpides, N, Woyke, T, Dodsworth, JA & Hedlund, BP 2016, 'High-quality draft genome sequence of Thermocrinis jamiesonii GBS1^T isolated from Great Boiling Spring, Nevada', Genome Announcements, vol. 4, no. 5, e01112-16. https://doi.org/10.1128/genomeA.01112-16

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abstract = "The draft genome of Thermocrinis jamiesonii GBS1T is 1,315,625 bp in 10 contigs and encodes 1,463 predicted genes. The presence of sox genes and various glycoside hydrolases and the absence of uptake NiFe hydrogenases (hyaB) are consistent with a requirement for thiosulfate and suggest the ability to use carbohydrate polymers.",

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note = "Funding Information: This work, including the efforts of Rakesh Ganji, Senthil K. Murugapiran, John C. Ong, Namritha Manoharan, Jeremy A. Dodsworth, and Brian P. Hedlund, was funded by National Science Foundation (NSF) (OISE-0968421). This work, including the efforts of Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishna Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, Tatiparthi Reddy, Chew Ngan, Chris Daum, Kecia Duffy, Nicole Shapiro, Victor Markowitz, Natalia Ivanova, Nikos C. Kyrpides, and Tanja Woyke, was funded by U.S. Department of Energy (DOE) (DE-AC02-05CH11231). Publisher Copyright: {\textcopyright} 2016 Ganji et al.",

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AU - Mikhailova, Natalia

AU - Stamatis, Dimitrios

AU - Reddy, T. B.K.

AU - Ngan, Chew Yee

AU - Daum, Chris

AU - Duffy, Kecia

AU - Shapiro, Nicole

AU - Markowitz, Victor

AU - Ivanova, Natalia

AU - Kyrpides, Nikos

AU - Woyke, Tanja

AU - Dodsworth, Jeremy A.

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