Graphical representation methods: How well do they discriminate between homologous gene sequences?

Dwaipayan Sen, Proyasha Roy, Ashesh Nandy, Subhash C. Basak, Sukhen Das

Research output: Contribution to journalArticle

Abstract

Graphical representation methods constitute a class of alignment-free techniques for comparative study of biomolecular sequences. In this brief commentary, we study how well some of these methods can discriminate among closely related genes.

Original languageEnglish (US)
Pages (from-to)156-164
Number of pages9
JournalChemical Physics
Volume513
DOIs
StatePublished - Sep 24 2018

Keywords

  • 2D and 3D methods
  • Discriminatory power of sequence descriptors
  • Flavivirus envelope genes
  • Globin genes
  • Graphical representation
  • Super-descriptors

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