Genomes of Geoalkalibacter ferrihydriticus Z-0531T and Geoalkalibacter subterraneus Red1T, two haloalkaliphilic metal-reducing Deltaproteobacteria

Jonathan P. Badalamenti; Rosa Krajmalnik-Brown; César I. Torres; Daniel R. Bond

doi:10.1128/genomeA.00039-15

Genomes of Geoalkalibacter ferrihydriticus Z-0531^T and Geoalkalibacter subterraneus Red1^T, two haloalkaliphilic metal-reducing Deltaproteobacteria

Jonathan P. Badalamenti, Rosa Krajmalnik-Brown, César I. Torres, Daniel R. Bond

Research output: Contribution to journal › Article › peer-review

6 Scopus citations

Abstract

We sequenced and annotated genomes of two haloalkaliphilic Deltaproteobacteria, Geoalkalibacter ferrihydriticus Z-0531^T (DSM 17813) and Geoalkalibacter subterraneus Red1^T (DSM 23483). During assembly, we discovered that the DSMZ stock culture of G. subterraneus was contaminated. We reisolated G. subterraneus in axenic culture and redeposited it in DSMZ and JCM.

Original language	English (US)
Article number	e00039-15
Journal	Genome Announcements
Volume	3
Issue number	2
DOIs	https://doi.org/10.1128/genomeA.00039-15
State	Published - 2016

Bibliographical note

Funding Information:
This work was supported by the Minnesota Environment and Natural Resources Trust Fund. Illumina sequencing was performed at the Biodesign Institute at Arizona State University. We thank Karl Oles (Mayo Clinic Bioinformatics Core) for performing PacBio library preparation and sequencing, and Jason Smith and Scott Binford for assistance with experimental design and data analysis.

Publisher Copyright:
� 2015 Badalamenti et al.

Publisher link

10.1128/genomeA.00039-15

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title = "Genomes of Geoalkalibacter ferrihydriticus Z-0531T and Geoalkalibacter subterraneus Red1T, two haloalkaliphilic metal-reducing Deltaproteobacteria",

abstract = "We sequenced and annotated genomes of two haloalkaliphilic Deltaproteobacteria, Geoalkalibacter ferrihydriticus Z-0531T (DSM 17813) and Geoalkalibacter subterraneus Red1T (DSM 23483). During assembly, we discovered that the DSMZ stock culture of G. subterraneus was contaminated. We reisolated G. subterraneus in axenic culture and redeposited it in DSMZ and JCM.",

author = "Badalamenti, {Jonathan P.} and Rosa Krajmalnik-Brown and Torres, {C{\'e}sar I.} and Bond, {Daniel R.}",

note = "Funding Information: This work was supported by the Minnesota Environment and Natural Resources Trust Fund. Illumina sequencing was performed at the Biodesign Institute at Arizona State University. We thank Karl Oles (Mayo Clinic Bioinformatics Core) for performing PacBio library preparation and sequencing, and Jason Smith and Scott Binford for assistance with experimental design and data analysis. Publisher Copyright: � 2015 Badalamenti et al.",

year = "2016",

doi = "10.1128/genomeA.00039-15",

language = "English (US)",

volume = "3",

journal = "Genome Announcements",

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T1 - Genomes of Geoalkalibacter ferrihydriticus Z-0531T and Geoalkalibacter subterraneus Red1T, two haloalkaliphilic metal-reducing Deltaproteobacteria

AU - Badalamenti, Jonathan P.

AU - Krajmalnik-Brown, Rosa

AU - Torres, César I.

AU - Bond, Daniel R.

N1 - Funding Information: This work was supported by the Minnesota Environment and Natural Resources Trust Fund. Illumina sequencing was performed at the Biodesign Institute at Arizona State University. We thank Karl Oles (Mayo Clinic Bioinformatics Core) for performing PacBio library preparation and sequencing, and Jason Smith and Scott Binford for assistance with experimental design and data analysis. Publisher Copyright: � 2015 Badalamenti et al.

PY - 2016

Y1 - 2016

N2 - We sequenced and annotated genomes of two haloalkaliphilic Deltaproteobacteria, Geoalkalibacter ferrihydriticus Z-0531T (DSM 17813) and Geoalkalibacter subterraneus Red1T (DSM 23483). During assembly, we discovered that the DSMZ stock culture of G. subterraneus was contaminated. We reisolated G. subterraneus in axenic culture and redeposited it in DSMZ and JCM.

AB - We sequenced and annotated genomes of two haloalkaliphilic Deltaproteobacteria, Geoalkalibacter ferrihydriticus Z-0531T (DSM 17813) and Geoalkalibacter subterraneus Red1T (DSM 23483). During assembly, we discovered that the DSMZ stock culture of G. subterraneus was contaminated. We reisolated G. subterraneus in axenic culture and redeposited it in DSMZ and JCM.

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