TY - JOUR
T1 - GenomeComp
T2 - A visualization tool for microbial genome comparison
AU - Yang, Jian
AU - Wang, Jinhua
AU - Yao, Zhi Jian
AU - Jin, Qi
AU - Shen, Yan
AU - Chen, Runsheng
N1 - Funding Information:
The development of GenomeComp was funded by the Chinese Academy of Sciences Grant No. KSCX2-2-07.
PY - 2003/9/1
Y1 - 2003/9/1
N2 - We have developed a software tool, GenomeComp, for summarizing, parsing and visualizing the genome sequences comparison results derived from voluminous BLAST textual output. With GenomeComp, the variation between genomes can be easily highlighted, such as repeat regions, insertions, deletions and rearrangements of genomic segments. This software provides a new visualizing tool for microbe comparative genomics.
AB - We have developed a software tool, GenomeComp, for summarizing, parsing and visualizing the genome sequences comparison results derived from voluminous BLAST textual output. With GenomeComp, the variation between genomes can be easily highlighted, such as repeat regions, insertions, deletions and rearrangements of genomic segments. This software provides a new visualizing tool for microbe comparative genomics.
KW - Perl/Tk
KW - Visualization
KW - Whole-genome comparison
UR - http://www.scopus.com/inward/record.url?scp=0038798562&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=0038798562&partnerID=8YFLogxK
U2 - 10.1016/S0167-7012(03)00094-0
DO - 10.1016/S0167-7012(03)00094-0
M3 - Article
C2 - 12842490
AN - SCOPUS:0038798562
SN - 0167-7012
VL - 54
SP - 423
EP - 426
JO - Journal of Microbiological Methods
JF - Journal of Microbiological Methods
IS - 3
ER -