First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya

Rachel M. Palinski; Abraham Sangula; Francis Gakuya; Miranda R. Bertram; Steven J. Pauszek; Ethan J. Hartwig; George R. Smoliga; David Vierra; Ian Fish; Vincent Obanda; George Omondi; Kimberly VanderWaal; Jonathan Arzt

doi:10.1128/MRA.00808-19

First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya

Rachel M. Palinski, Abraham Sangula, Francis Gakuya, Miranda R. Bertram, Steven J. Pauszek, Ethan J. Hartwig, George R. Smoliga, David Vierra, Ian Fish, Vincent Obanda, George Omondi, Kimberly VanderWaal, Jonathan Arzt

Veterinary Population Medicine

Research output: Contribution to journal › Article › peer-review

Abstract

This is the first report of two near-complete genome sequences of foot- and-mouth disease virus (FMDV) serotype O from Kenya. The viruses were isolated from bovine epithelium collected in 2014 and 2016 from local FMD outbreaks. These full-genome sequences are critical for improving the understanding of regional FMDV molecular epidemiology.

Original language	English (US)
Article number	e00808-19
Journal	Microbiology Resource Announcements
Volume	8
Issue number	35
DOIs	https://doi.org/10.1128/MRA.00808-19
State	Published - Aug 29 2019

Bibliographical note

Funding Information:
This research was funded in part by ARS-CRIS project 1940-32000-061-00D and USAID prime agreement number AID-OAA-A-11-00012. Miranda R. Bertram and Ian Fish were the recipients of a Plum Island Animal Disease Center Research Participation Program fellowship, administered by the Oak Ridge Institute for Science and Education (ORISE) through an interagency agreement between the U.S. Department of Energy (DOE) and the U.S. Department of Agriculture (USDA). All opinions expressed in this paper are the authors’ and do not necessarily reflect the policies and views of the USDA, DOE, or ORAU/ORISE.

Funding Information:
This research was funded in part by ARS-CRIS project 1940-32000-061-00D and USAID prime agreement number AID-OAA-A-11-00012. Miranda R. Bertram and Ian Fish were the recipients of a Plum Island Animal Disease Center Research Participation Program fellowship, administered by the Oak Ridge Institute for Science and Education (ORISE) through an interagency agreement between the U.S. Department of Energy (DOE) and the U.S. Department of Agriculture (USDA). All opinions expressed in this paper are the authors? and do not necessarily reflect the policies and views of the USDA, DOE, or ORAU/ORISE. We thank Eunice Chepkwony and Kenneth Ketter for their support with sample collection and processing.

Publisher Copyright:
© 2019 American Society for Microbiology. All rights reserved.

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Palinski, R. M., Sangula, A., Gakuya, F., Bertram, M. R., Pauszek, S. J., Hartwig, E. J., Smoliga, G. R., Vierra, D., Fish, I., Obanda, V., Omondi, G., VanderWaal, K., & Arzt, J. (2019). First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya. Microbiology Resource Announcements, 8(35), [e00808-19]. https://doi.org/10.1128/MRA.00808-19

First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya. / Palinski, Rachel M.; Sangula, Abraham; Gakuya, Francis; Bertram, Miranda R.; Pauszek, Steven J.; Hartwig, Ethan J.; Smoliga, George R.; Vierra, David; Fish, Ian; Obanda, Vincent; Omondi, George ; VanderWaal, Kimberly; Arzt, Jonathan.

In: Microbiology Resource Announcements, Vol. 8, No. 35, e00808-19, 29.08.2019.

Research output: Contribution to journal › Article › peer-review

Palinski, RM, Sangula, A, Gakuya, F, Bertram, MR, Pauszek, SJ, Hartwig, EJ, Smoliga, GR, Vierra, D, Fish, I, Obanda, V, Omondi, G , VanderWaal, K & Arzt, J 2019, 'First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya', Microbiology Resource Announcements, vol. 8, no. 35, e00808-19. https://doi.org/10.1128/MRA.00808-19

Palinski, Rachel M. ; Sangula, Abraham ; Gakuya, Francis ; Bertram, Miranda R. ; Pauszek, Steven J. ; Hartwig, Ethan J. ; Smoliga, George R. ; Vierra, David ; Fish, Ian ; Obanda, Vincent ; Omondi, George ; VanderWaal, Kimberly ; Arzt, Jonathan. / First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya. In: Microbiology Resource Announcements. 2019 ; Vol. 8, No. 35.

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abstract = "This is the first report of two near-complete genome sequences of foot- and-mouth disease virus (FMDV) serotype O from Kenya. The viruses were isolated from bovine epithelium collected in 2014 and 2016 from local FMD outbreaks. These full-genome sequences are critical for improving the understanding of regional FMDV molecular epidemiology.",

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note = "Funding Information: This research was funded in part by ARS-CRIS project 1940-32000-061-00D and USAID prime agreement number AID-OAA-A-11-00012. Miranda R. Bertram and Ian Fish were the recipients of a Plum Island Animal Disease Center Research Participation Program fellowship, administered by the Oak Ridge Institute for Science and Education (ORISE) through an interagency agreement between the U.S. Department of Energy (DOE) and the U.S. Department of Agriculture (USDA). All opinions expressed in this paper are the authors{\textquoteright} and do not necessarily reflect the policies and views of the USDA, DOE, or ORAU/ORISE. Funding Information: This research was funded in part by ARS-CRIS project 1940-32000-061-00D and USAID prime agreement number AID-OAA-A-11-00012. Miranda R. Bertram and Ian Fish were the recipients of a Plum Island Animal Disease Center Research Participation Program fellowship, administered by the Oak Ridge Institute for Science and Education (ORISE) through an interagency agreement between the U.S. Department of Energy (DOE) and the U.S. Department of Agriculture (USDA). All opinions expressed in this paper are the authors? and do not necessarily reflect the policies and views of the USDA, DOE, or ORAU/ORISE. We thank Eunice Chepkwony and Kenneth Ketter for their support with sample collection and processing. Publisher Copyright: {\textcopyright} 2019 American Society for Microbiology. All rights reserved.",

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First report of near-complete genome sequences of foot- And-mouth disease virus serotype O strains from Kenya

Abstract

Bibliographical note

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