Fast string kernels using inexact matching for protein sequences

Keyphrases

• Classification Performance 100%
• Protein Sequence 100%
• Protein Classification 100%
• Inexact Matching 100%
• String Kernel 100%
• K-mer 100%
• Wildcard 50%
• Parameter Dependence 50%
• Feature Space 50%
• Parameter Selection 50%
• Support Vector Machine Classifier 50%
• Subsequence 50%
• Support Vector Machine Classification 50%
• Profile Hidden Markov Models (pHMMs) 50%
• Protein Sequence Data 50%
• Trie Data Structure 50%
• Fisher Kernel 50%
• Kernel Value 50%

Computer Science

• Support Vector Machine 100%
• Amino Acid Sequence 100%
• Data Structure 50%
• Feature Space 50%
• Dependent Parameter 50%
• Classification Performance 50%
• Wildcard 50%