Enhancing Gene Expression Predictions Using Deep Learning and Functional Annotations

Keyphrases

• Deep Learning 100%
• Functional Annotation 100%
• Elastic Net Regression 100%
• Gene Expression Prediction 100%
• Gene Expression 66%
• Nonlinear Effects 66%
• Biological Systems 33%
• Genomic Data 33%
• Genotype 33%
• Genotype-phenotype 33%
• Performance Prediction 33%
• Multiplex Networks 33%
• Two-stage Procedure 33%
• Trait Association 33%
• Large Set 33%
• Expression Quantitative Trait Loci (eQTL) 33%
• Nonlinear Relationship 33%
• Genotypic Variation 33%
• Functional Information 33%
• Linear Method 33%
• Higher-order Interactions 33%
• Input Scaling 33%
• Equivalent Gain 33%
• Transcriptome-wide Association Study 33%
• Deep Learning Architectures 33%
• Convolutional Encoder 33%
• Parameter Sharing 33%
• Nonlinear Functional 33%

Computer Science

• Annotation 100%
• Deep Learning Method 100%
• Interpretability 33%
• Biological System 33%
• Predictive Performance 33%
• Interaction Order 33%
• Genetic Variability 33%