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End-to-end deep learning for tuning-free non-contrast ultrasound microvessel imaging

  • Ahmed Tahseen Minhaz
  • , Michaela Cooley
  • , Ananya Subramaniam
  • , Agata Exner
  • , Faruk Orge
  • , David Wilson
  • , Mahdi Bayat

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

Microvessel (MV) imaging using non-contrast US is challenging due to low blood echo SNR, the presence of spectrally overlapping tissue clutter, and noise. Spatiotemporal clutter removal, e.g., via singular value decomposition (SVD), requires parameter tuning and are computationally expensive. In this work, we proposed an end-to-end deep learning approach to remove tissue clutter and extract blood signals from US ensemble in a purely data-driven fashion. Our deep learning approach accelerates the decluttering process and provides a generalizable framework to adapt to realistic scenarios via diversly augmented data. In this preliminary study, we scanned a day 8 developing chicken embryo to collect US ensembles of different regions of the embryo. Training data was created using a fine-tuned SVD for tissue clutter removal and to train a 2D U-net. The proposed deep learning approach can reconstruct MV from US ensembles (structural similarity index of 0.83 ± 0.02 compared to processing via SVD) implying good reconstruction. Our end-to-end deep learning approach is also 2x faster than the traditional SVD approach. Deep learning based MV imaging using non-contrast US shows promise in reconstructing MV in presence of different tissue motions and can be extended to perform under various SNR, noise, and motion conditions.

Original languageEnglish (US)
Title of host publicationIUS 2022 - IEEE International Ultrasonics Symposium
PublisherIEEE Computer Society
ISBN (Electronic)9781665466578
DOIs
StatePublished - 2022
Externally publishedYes
Event2022 IEEE International Ultrasonics Symposium, IUS 2022 - Venice, Italy
Duration: Oct 10 2022 → Oct 13 2022

Publication series

NameIEEE International Ultrasonics Symposium, IUS
Volume2022-October
ISSN (Print)1948-5719
ISSN (Electronic)1948-5727

Conference

Conference2022 IEEE International Ultrasonics Symposium, IUS 2022
Country/TerritoryItaly
CityVenice
Period10/10/22 → 10/13/22

Bibliographical note

Publisher Copyright:
© 2022 IEEE.

Keywords

  • deep learning
  • microvessel
  • ultrasound

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