Efficient Training of 3D Unrolled Neural Networks for MRI Reconstruction Using Small Databases

Zilin Deng, Burhaneddin Yaman, Chi Zhang, Steen Moeller, Mehmet Akcakaya

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Abstract

3D MRI encodes volumetric information, typically offering improved contiguous coverage and resolution than 2D MRI. However, 3D MRI data acquisition is lengthy, and requires accelerated imaging techniques. Deep learning methods have recently emerged as a powerful strategy for MRI reconstruction. Among such methods, unrolled networks have proven powerful with their ability to incorporate the forward encoding operator directly. These methods are largely applied in a 2D setting, but 3D processing has the potential to further improve reconstruction quality for volumetric imaging by capturing multi-dimensional interactions. Nevertheless, implementing 3D unrolled networks is challenging because of memory limitations on GPUs, as well as the lack of large databases of 3D k-space data. To tackle both of these issues, we propose a data augmentation strategy that generates smaller sub-volumes from large volumetric datasets. Subsequently, these augmented datasets are used to train a 3D unrolled network, and compared to their 2D counterpart. The results show that our 3D processing provides improved reconstruction results on volumetric data than 2D processing.

Original languageEnglish (US)
Title of host publication55th Asilomar Conference on Signals, Systems and Computers, ACSSC 2021
EditorsMichael B. Matthews
PublisherIEEE Computer Society
Pages886-889
Number of pages4
ISBN (Electronic)9781665458283
DOIs
StatePublished - 2021
Event55th Asilomar Conference on Signals, Systems and Computers, ACSSC 2021 - Virtual, Pacific Grove, United States
Duration: Oct 31 2021Nov 3 2021

Publication series

NameConference Record - Asilomar Conference on Signals, Systems and Computers
Volume2021-October
ISSN (Print)1058-6393

Conference

Conference55th Asilomar Conference on Signals, Systems and Computers, ACSSC 2021
Country/TerritoryUnited States
CityVirtual, Pacific Grove
Period10/31/2111/3/21

Bibliographical note

Publisher Copyright:
© 2021 IEEE.

Keywords

  • 3D processing
  • algorithm unrolling
  • deep learning
  • MRI
  • network training

Center for Magnetic Resonance Research (CMRR) tags

  • IRP

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