TY - JOUR
T1 - Diagnostic Prediction Model for Tuberculous Meningitis
T2 - An Individual Participant Data Meta-Analysis
AU - Stadelman-Behar, Anna M.
AU - Tiffin, Nicki
AU - Ellis, Jayne
AU - Creswell, Fiona V.
AU - Ssebambulidde, Kenneth
AU - Nuwagira, Edwin
AU - Richards, Lauren
AU - Lutje, Vittoria
AU - Hristea, Adriana
AU - Jipa, Raluca Elena
AU - Vidal, José E.
AU - Azevedo, Renata G.S.
AU - de Almeida, Sérgio Monteiro
AU - Kussen, Gislene Botao
AU - Nogueira, Keite
AU - Gualberto, Felipe Augusto Souza
AU - Metcalf, Tatiana
AU - Heemskerk, Anna Dorothee
AU - Dendane, Tarek
AU - Khalid, Abidi
AU - Zeggwagh, Amine Ali
AU - Bateman, Kathleen
AU - Siebert, Uwe
AU - Rochau, Ursula
AU - van Laarhoven, Arjan
AU - van Crevel, Reinout
AU - Ganiem, Ahmad Rizal
AU - Dian, Sofiati
AU - Jarvis, Joseph
AU - Donovan, Joseph
AU - Thuong, Thuong Nguyen Thuy
AU - Thwaites, Guy E.
AU - Bahr, Nathan C.
AU - Meya, David B
AU - Boulware, David R.
AU - Boyles, Tom H.
N1 - Publisher Copyright:
© 2024 American Society of Tropical Medicine and Hygiene.
PY - 2024/9
Y1 - 2024/9
N2 - No accurate and rapid diagnostic test exists for tuberculous meningitis (TBM), leading to delayed diagnosis. We leveraged data from multiple studies to improve the predictive performance of diagnostic models across different populations, settings, and subgroups to develop a new predictive tool for TBM diagnosis. We conducted a systematic review to analyze eligible datasets with individual-level participant data (IPD). We imputed missing data and explored three approaches: stepwise logistic regression, classification and regression tree (CART), and random forest regression. We evaluated performance using calibration plots and C-statistics via internal-external cross-validation. We included 3,761 individual participants from 14 studies and nine countries. A total of 1,240 (33%) participants had "definite"(30%) or "probable"(3%) TBM by case definition. Important predictive variables included cerebrospinal fluid (CSF) glucose, blood glucose, CSF white cell count, CSF differential, cryptococcal antigen, HIV status, and fever presence. Internal validation showed that performance varied considerably between IPD datasets with C-statistic values between 0.60 and 0.89. In external validation, CART performed the worst (C = 0.82), and logistic regression and random forest had the same accuracy (C = 0.91). We developed a mobile app for TBM clinical prediction that accounted for heterogeneity and improved diagnostic performance (https://tbmcalc.github.io/tbmcalc). Further external validation is needed.
AB - No accurate and rapid diagnostic test exists for tuberculous meningitis (TBM), leading to delayed diagnosis. We leveraged data from multiple studies to improve the predictive performance of diagnostic models across different populations, settings, and subgroups to develop a new predictive tool for TBM diagnosis. We conducted a systematic review to analyze eligible datasets with individual-level participant data (IPD). We imputed missing data and explored three approaches: stepwise logistic regression, classification and regression tree (CART), and random forest regression. We evaluated performance using calibration plots and C-statistics via internal-external cross-validation. We included 3,761 individual participants from 14 studies and nine countries. A total of 1,240 (33%) participants had "definite"(30%) or "probable"(3%) TBM by case definition. Important predictive variables included cerebrospinal fluid (CSF) glucose, blood glucose, CSF white cell count, CSF differential, cryptococcal antigen, HIV status, and fever presence. Internal validation showed that performance varied considerably between IPD datasets with C-statistic values between 0.60 and 0.89. In external validation, CART performed the worst (C = 0.82), and logistic regression and random forest had the same accuracy (C = 0.91). We developed a mobile app for TBM clinical prediction that accounted for heterogeneity and improved diagnostic performance (https://tbmcalc.github.io/tbmcalc). Further external validation is needed.
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U2 - 10.4269/ajtmh.23-0789
DO - 10.4269/ajtmh.23-0789
M3 - Article
C2 - 39013385
AN - SCOPUS:85203253090
SN - 0002-9637
VL - 111
SP - 546
EP - 553
JO - American Journal of Tropical Medicine and Hygiene
JF - American Journal of Tropical Medicine and Hygiene
IS - 3
ER -