Development of Microbiome Biobanks – Challenges and Opportunities

M. J. Ryan; M. Schloter; G. Berg; T. Kostic; L. L. Kinkel; K. Eversole; J. A. Macklin; B. Schelkle; M. Kazou; I. Sarand; B. K. Singh; D. Fischer; E. Maguin; I. Ferrocino; N. Lima; R. S. McClure; T. C. Charles; R. S.C. de Souza; G. S. Kiran; H. L. Krug; J. Taffner; H. Roume; J. Selvin; D. Smith; D. Rybakova; A. Sessitsch

doi:10.1016/j.tim.2020.06.009

Development of Microbiome Biobanks – Challenges and Opportunities

M. J. Ryan, M. Schloter, G. Berg, T. Kostic, L. L. Kinkel, K. Eversole, J. A. Macklin, B. Schelkle, M. Kazou, I. Sarand, B. K. Singh, D. Fischer, E. Maguin, I. Ferrocino, N. Lima, R. S. McClure, T. C. Charles, R. S.C. de Souza, G. S. Kiran, H. L. KrugJ. Taffner, H. Roume, J. Selvin, D. Smith, D. Rybakova, A. Sessitsch

Plant Pathology

Research output: Contribution to journal › Comment/debate › peer-review

2 Scopus citations

Abstract

The microbiome research field is rapidly evolving, but the required biobanking infrastructure is currently fragmented and not prepared for the biobanking of microbiomes. The rapid advancement of technologies requires an urgent assessment of how biobanks can underpin research by preserving microbiome samples and their functional potential.

Original language	English (US)
Pages (from-to)	89-92
Number of pages	4
Journal	Trends in Microbiology
Volume	29
Issue number	2
DOIs	https://doi.org/10.1016/j.tim.2020.06.009
State	Published - Feb 2021

Bibliographical note

Funding Information:
This paper is an output from the EU project MicrobiomeSupport, which has received funding from the European Union’s Horizon 2020 Research and Innovation Programme under grant agreement No 818116 .

Keywords

biobanks
cryopreservation
metagenomics
microbiome

PubMed: MeSH publication types

Journal Article

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Ryan, M. J., Schloter, M., Berg, G., Kostic, T., Kinkel, L. L., Eversole, K., Macklin, J. A., Schelkle, B., Kazou, M., Sarand, I., Singh, B. K., Fischer, D., Maguin, E., Ferrocino, I., Lima, N., McClure, R. S., Charles, T. C., de Souza, R. S. C., Kiran, G. S., ... Sessitsch, A. (2021). Development of Microbiome Biobanks – Challenges and Opportunities. Trends in Microbiology, 29(2), 89-92. https://doi.org/10.1016/j.tim.2020.06.009

Development of Microbiome Biobanks – Challenges and Opportunities. / Ryan, M. J.; Schloter, M.; Berg, G.; Kostic, T.; Kinkel, L. L.; Eversole, K.; Macklin, J. A.; Schelkle, B.; Kazou, M.; Sarand, I.; Singh, B. K.; Fischer, D.; Maguin, E.; Ferrocino, I.; Lima, N.; McClure, R. S.; Charles, T. C.; de Souza, R. S.C.; Kiran, G. S.; Krug, H. L.; Taffner, J.; Roume, H.; Selvin, J.; Smith, D.; Rybakova, D.; Sessitsch, A.

In: Trends in Microbiology, Vol. 29, No. 2, 02.2021, p. 89-92.

Research output: Contribution to journal › Comment/debate › peer-review

Ryan, MJ, Schloter, M, Berg, G, Kostic, T, Kinkel, LL, Eversole, K, Macklin, JA, Schelkle, B, Kazou, M, Sarand, I, Singh, BK, Fischer, D, Maguin, E, Ferrocino, I, Lima, N, McClure, RS, Charles, TC, de Souza, RSC, Kiran, GS, Krug, HL, Taffner, J, Roume, H, Selvin, J, Smith, D, Rybakova, D & Sessitsch, A 2021, 'Development of Microbiome Biobanks – Challenges and Opportunities', Trends in Microbiology, vol. 29, no. 2, pp. 89-92. https://doi.org/10.1016/j.tim.2020.06.009

Ryan, M. J. ; Schloter, M. ; Berg, G. ; Kostic, T. ; Kinkel, L. L. ; Eversole, K. ; Macklin, J. A. ; Schelkle, B. ; Kazou, M. ; Sarand, I. ; Singh, B. K. ; Fischer, D. ; Maguin, E. ; Ferrocino, I. ; Lima, N. ; McClure, R. S. ; Charles, T. C. ; de Souza, R. S.C. ; Kiran, G. S. ; Krug, H. L. ; Taffner, J. ; Roume, H. ; Selvin, J. ; Smith, D. ; Rybakova, D. ; Sessitsch, A. / Development of Microbiome Biobanks – Challenges and Opportunities. In: Trends in Microbiology. 2021 ; Vol. 29, No. 2. pp. 89-92.

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