Cyanobacterial aldehyde deformylase oxygenation of aldehydes yields n - 1 aldehydes and alcohols in addition to alkanes

Kelly G Aukema, Thomas M. Makris, Sebastian A. Stoian, Jack E Richman, Eckard Münck, John D Lipscomb, Lawrence P Wackett

Research output: Contribution to journalArticle

33 Citations (Scopus)

Abstract

Aldehyde-deformylating oxygenase (ADO) catalyzes O2-dependent release of the terminal carbon of a biological substrate, octadecanal, to yield formate and heptadecane in a reaction that requires external reducing equivalents. We show here that ADO also catalyzes incorporation of an oxygen atom from O2 into the alkane product to yield alcohol and aldehyde products. Oxygenation of the alkane product is much more pronounced with C 9-10 aldehyde substrates so that use of nonanal as the substrate yields similar amounts of octane, octanal, and octanol products. When using doubly labeled [1,2-13C]octanal as the substrate, the heptane, heptanal, and heptanol products each contained a single 13C-label in the C-1 carbons atoms. The only one-carbon product identified was formate. [18O]O2 incorporation studies demonstrated formation of [18O]alcohol product, but rapid solvent exchange prevented similar determination for the aldehyde product. Addition of [1-13C]nonanol with decanal as the substrate at the outset of the reaction resulted in formation of [1-13C]nonanal. No 13C-product was formed in the absence of decanal. ADO contains an oxygen-bridged dinuclear iron cluster. The observation of alcohol and aldehyde products derived from the initially formed alkane product suggests a reactive species similar to that formed by methane monooxygenase (MMO) and other members of the bacterial multicomponent monooxygenase family. Accordingly, characterization by EPR and Mössbauer spectroscopies shows that the electronic structure of the ADO cluster is similar, but not identical, to that of the MMO hydroxylase component. In particular, the two irons of ADO reside in nearly identical environments in both the oxidized and fully reduced states, whereas those of MMOH show distinct differences. These favorable characteristics of the iron sites allow, for the first time for any biological system, a comprehensive determination of the spin Hamiltonian parameters describing the electronic state of the diferrous cluster. The nature of the diiron cluster and the newly recognized products from ADO catalysis hold implications for the mechanism of C-C bond cleavage.

Original languageEnglish (US)
Pages (from-to)2228-2238
Number of pages11
JournalACS Catalysis
Volume3
Issue number10
DOIs
StatePublished - Oct 4 2013

Fingerprint

Alkanes
Oxygenation
Aldehydes
Paraffins
Alcohols
Oxygenases
formic acid
methane monooxygenase
Substrates
Carbon
Iron
Methane
Heptanol
Oxygen
Heptanes
Octanols
Hamiltonians
Atoms
Electronic states
Heptane

Keywords

  • C NMR
  • EPR
  • GC/MS
  • Mössbauer
  • Prochlorococcus marinus
  • biofuel
  • nonheme diiron enzyme
  • oxygenase

Cite this

Cyanobacterial aldehyde deformylase oxygenation of aldehydes yields n - 1 aldehydes and alcohols in addition to alkanes. / Aukema, Kelly G; Makris, Thomas M.; Stoian, Sebastian A.; Richman, Jack E; Münck, Eckard; Lipscomb, John D; Wackett, Lawrence P.

In: ACS Catalysis, Vol. 3, No. 10, 04.10.2013, p. 2228-2238.

Research output: Contribution to journalArticle

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T1 - Cyanobacterial aldehyde deformylase oxygenation of aldehydes yields n - 1 aldehydes and alcohols in addition to alkanes

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AU - Richman, Jack E

AU - Münck, Eckard

AU - Lipscomb, John D

AU - Wackett, Lawrence P

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N2 - Aldehyde-deformylating oxygenase (ADO) catalyzes O2-dependent release of the terminal carbon of a biological substrate, octadecanal, to yield formate and heptadecane in a reaction that requires external reducing equivalents. We show here that ADO also catalyzes incorporation of an oxygen atom from O2 into the alkane product to yield alcohol and aldehyde products. Oxygenation of the alkane product is much more pronounced with C 9-10 aldehyde substrates so that use of nonanal as the substrate yields similar amounts of octane, octanal, and octanol products. When using doubly labeled [1,2-13C]octanal as the substrate, the heptane, heptanal, and heptanol products each contained a single 13C-label in the C-1 carbons atoms. The only one-carbon product identified was formate. [18O]O2 incorporation studies demonstrated formation of [18O]alcohol product, but rapid solvent exchange prevented similar determination for the aldehyde product. Addition of [1-13C]nonanol with decanal as the substrate at the outset of the reaction resulted in formation of [1-13C]nonanal. No 13C-product was formed in the absence of decanal. ADO contains an oxygen-bridged dinuclear iron cluster. The observation of alcohol and aldehyde products derived from the initially formed alkane product suggests a reactive species similar to that formed by methane monooxygenase (MMO) and other members of the bacterial multicomponent monooxygenase family. Accordingly, characterization by EPR and Mössbauer spectroscopies shows that the electronic structure of the ADO cluster is similar, but not identical, to that of the MMO hydroxylase component. In particular, the two irons of ADO reside in nearly identical environments in both the oxidized and fully reduced states, whereas those of MMOH show distinct differences. These favorable characteristics of the iron sites allow, for the first time for any biological system, a comprehensive determination of the spin Hamiltonian parameters describing the electronic state of the diferrous cluster. The nature of the diiron cluster and the newly recognized products from ADO catalysis hold implications for the mechanism of C-C bond cleavage.

AB - Aldehyde-deformylating oxygenase (ADO) catalyzes O2-dependent release of the terminal carbon of a biological substrate, octadecanal, to yield formate and heptadecane in a reaction that requires external reducing equivalents. We show here that ADO also catalyzes incorporation of an oxygen atom from O2 into the alkane product to yield alcohol and aldehyde products. Oxygenation of the alkane product is much more pronounced with C 9-10 aldehyde substrates so that use of nonanal as the substrate yields similar amounts of octane, octanal, and octanol products. When using doubly labeled [1,2-13C]octanal as the substrate, the heptane, heptanal, and heptanol products each contained a single 13C-label in the C-1 carbons atoms. The only one-carbon product identified was formate. [18O]O2 incorporation studies demonstrated formation of [18O]alcohol product, but rapid solvent exchange prevented similar determination for the aldehyde product. Addition of [1-13C]nonanol with decanal as the substrate at the outset of the reaction resulted in formation of [1-13C]nonanal. No 13C-product was formed in the absence of decanal. ADO contains an oxygen-bridged dinuclear iron cluster. The observation of alcohol and aldehyde products derived from the initially formed alkane product suggests a reactive species similar to that formed by methane monooxygenase (MMO) and other members of the bacterial multicomponent monooxygenase family. Accordingly, characterization by EPR and Mössbauer spectroscopies shows that the electronic structure of the ADO cluster is similar, but not identical, to that of the MMO hydroxylase component. In particular, the two irons of ADO reside in nearly identical environments in both the oxidized and fully reduced states, whereas those of MMOH show distinct differences. These favorable characteristics of the iron sites allow, for the first time for any biological system, a comprehensive determination of the spin Hamiltonian parameters describing the electronic state of the diferrous cluster. The nature of the diiron cluster and the newly recognized products from ADO catalysis hold implications for the mechanism of C-C bond cleavage.

KW - C NMR

KW - EPR

KW - GC/MS

KW - Mössbauer

KW - Prochlorococcus marinus

KW - biofuel

KW - nonheme diiron enzyme

KW - oxygenase

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