TY - JOUR
T1 - Comparison of qsars and characterization of structural basis of bioactivity using partial order theory and formal concept analysis
T2 - A case study with mutagenicity
AU - Restrepo, Guillermo
AU - Basak, Subhash C
AU - Mills, Denise
PY - 2011/1/1
Y1 - 2011/1/1
N2 - Fifteen quantitative structure-activity relationship (QSAR) models developed by various authors for the prediction of mutagenicity of aromatic and heteroaromatic amines were analyzed and thirteen of them, based on 95 amines, were compared using their respective statistics and order theory (Hasse Diagram Technique, HDT) to obtain an ordering of QSAR models. The technique of Formal Concept Analysis (FCA) was applied to the set of 95 amines to extract concepts and, in general, knowledge about the relationship between structural attributes and mutagenicity. HDT may be useful as a general tool for the comparison of different classes of QSAR models. FCA turns out to be a novel mathematical technique for seeking for relationships between molecular structure and activity.
AB - Fifteen quantitative structure-activity relationship (QSAR) models developed by various authors for the prediction of mutagenicity of aromatic and heteroaromatic amines were analyzed and thirteen of them, based on 95 amines, were compared using their respective statistics and order theory (Hasse Diagram Technique, HDT) to obtain an ordering of QSAR models. The technique of Formal Concept Analysis (FCA) was applied to the set of 95 amines to extract concepts and, in general, knowledge about the relationship between structural attributes and mutagenicity. HDT may be useful as a general tool for the comparison of different classes of QSAR models. FCA turns out to be a novel mathematical technique for seeking for relationships between molecular structure and activity.
KW - Aromatic amines
KW - Formal concept analysis (FCA)
KW - Hasse diagram technique (HDT)
KW - Mutagenicity
KW - Quantitative structure-activity relationship (QSAR)
KW - Structure-activity relationship (SAR)
UR - http://www.scopus.com/inward/record.url?scp=79956271716&partnerID=8YFLogxK
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U2 - 10.2174/157340911795677639
DO - 10.2174/157340911795677639
M3 - Article
C2 - 21542792
AN - SCOPUS:79956271716
VL - 7
SP - 109
EP - 121
JO - Current Computer-Aided Drug Design
JF - Current Computer-Aided Drug Design
SN - 1573-4099
IS - 2
ER -