Characterization of the VirG binding site of Agrobacterium tumefaciens

Gregory J. Pazour, Anath Das

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Expression of Agrobacterium tumefaciens virulence (vir) genes is dependent on the presence of a conserved 'vir box' sequence In their 5′ nontranscrlbed regions. The location and number of these sequences vary considerably in different vir genes. Site-directed mutagenesis was used to indentify the functional vir box(es) of virB, virC and virD. For virB expression both vir box B1 and B2 are required but only the vir box B1 is absolutely essential. Of the five vir boxes of virC and virD two are required for virC expression while only one vir box is required for virD expression. To investigate the minimum sequences necessary for vir gene induction a deletion derivative of virE that lacks the vir box region was used. This mutant is not induced by acetosyringone. The induclbillty of this promoter was restored when a synthetic deoxyoligonucleotide dGTTTCAATTGAAAC was introduced at a location analogous to that of the wild type vir box sequence. Mutational analysis indicate that the functional vir box sequence is 14 residues in length, contains a dyad symmetry and has the consensus sequence d ryTnAa TTGnAaY (r=purine, y=pyrimidine).

Original languageEnglish (US)
Pages (from-to)6909-6913
Number of pages5
JournalNucleic acids research
Issue number23
StatePublished - 1990

Bibliographical note

Funding Information:
We thank Ann Vogel and John Larkin for a critical reading of the manuscript and Dominique Shimizu for constructing pDSlc. This study was supported by a grant from the National Institute of Health (GM 37555), a Junior Faculty Research Award from the American Cancer Society (JFRA 170) and a McKnight Land-Grant Professorship Award from the University of Minnesota. GP is a Graduate School Dissertation Fellow of the University of Minnesota.


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