Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record

Huixue Zhou; Greg M Silverman; Zhongran Niu; Jenzi Silverman; Rui Zhang; Roni L Evans; Robin Austin

doi:10.1109/ICHI54592.2022.00121

Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record

Huixue Zhou, Greg M Silverman, Zhongran Niu, Jenzi Silverman, Rui Zhang, Roni L Evans, Robin Austin

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

1 Scopus citations

Abstract

Complementary and Integrative Health (CIH) has gained increasing popularity in the past decades. The overall goal of this study is to represent information pertinent to music therapy, chiropractic, and aquatic exercise in an EHR system. A total of 300 clinical notes were randomly selected and manually annotated. Annotations were made for status, symptom, and frequency of each approach. This set of annotations was used as a gold standard to evaluate performance of NLP systems used in this study (specifically BioMedICUS, MetaMap and cTAKES) for extracting CIH concepts. Three NLP systems achieved an average lenient match Fl-score of 0.50 in all three CIH approaches. BioMedICUS achieved the best performance in music therapy with an F1-score of 0.73. This study is a pilot to investigate CIH representation in clinical note and lays a foundation for using EHR for clinical research for CIH approaches.

Original language	English (US)
Title of host publication	Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	610-611
Number of pages	2
ISBN (Electronic)	9781665468459
DOIs	https://doi.org/10.1109/ICHI54592.2022.00121
State	Published - 2022
Event	10th IEEE International Conference on Healthcare Informatics, ICHI 2022 - Rochester, United States Duration: Jun 11 2022 → Jun 14 2022

Publication series

Name	Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022

Conference

Conference	10th IEEE International Conference on Healthcare Informatics, ICHI 2022
Country/Territory	United States
City	Rochester
Period	6/11/22 → 6/14/22

Bibliographical note

Publisher Copyright:
© 2022 IEEE.

Keywords

complementary and integrative health
electronic health record
knowledge representation

Publisher link

10.1109/ICHI54592.2022.00121

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Zhou, H., Silverman, G. M., Niu, Z., Silverman, J., Zhang, R., Evans, R. L., & Austin, R. (2022). Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record. In Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022 (pp. 610-611). (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICHI54592.2022.00121

Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record. / Zhou, Huixue; Silverman, Greg M; Niu, Zhongran et al.
Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., 2022. p. 610-611 (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Zhou, H, Silverman, GM, Niu, Z, Silverman, J, Zhang, R , Evans, RL & Austin, R 2022, Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record. in Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022, Institute of Electrical and Electronics Engineers Inc., pp. 610-611, 10th IEEE International Conference on Healthcare Informatics, ICHI 2022, Rochester, United States, 6/11/22. https://doi.org/10.1109/ICHI54592.2022.00121

Zhou H, Silverman GM, Niu Z, Silverman J, Zhang R , Evans RL et al. Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record. In Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc. 2022. p. 610-611. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022). doi: 10.1109/ICHI54592.2022.00121

Zhou, Huixue ; Silverman, Greg M ; Niu, Zhongran et al. / Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record. Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., 2022. pp. 610-611 (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

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abstract = "Complementary and Integrative Health (CIH) has gained increasing popularity in the past decades. The overall goal of this study is to represent information pertinent to music therapy, chiropractic, and aquatic exercise in an EHR system. A total of 300 clinical notes were randomly selected and manually annotated. Annotations were made for status, symptom, and frequency of each approach. This set of annotations was used as a gold standard to evaluate performance of NLP systems used in this study (specifically BioMedICUS, MetaMap and cTAKES) for extracting CIH concepts. Three NLP systems achieved an average lenient match Fl-score of 0.50 in all three CIH approaches. BioMedICUS achieved the best performance in music therapy with an F1-score of 0.73. This study is a pilot to investigate CIH representation in clinical note and lays a foundation for using EHR for clinical research for CIH approaches.",

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author = "Huixue Zhou and Silverman, {Greg M} and Zhongran Niu and Jenzi Silverman and Rui Zhang and Evans, {Roni L} and Robin Austin",

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AB - Complementary and Integrative Health (CIH) has gained increasing popularity in the past decades. The overall goal of this study is to represent information pertinent to music therapy, chiropractic, and aquatic exercise in an EHR system. A total of 300 clinical notes were randomly selected and manually annotated. Annotations were made for status, symptom, and frequency of each approach. This set of annotations was used as a gold standard to evaluate performance of NLP systems used in this study (specifically BioMedICUS, MetaMap and cTAKES) for extracting CIH concepts. Three NLP systems achieved an average lenient match Fl-score of 0.50 in all three CIH approaches. BioMedICUS achieved the best performance in music therapy with an F1-score of 0.73. This study is a pilot to investigate CIH representation in clinical note and lays a foundation for using EHR for clinical research for CIH approaches.

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Annotating Music Therapy, Chiropractic and Aquatic Exercise Using Electronic Health Record

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