Automated high-throughput phenotyping with sensors, imaging, and other on-farm technologies has resulted in a flood of data that are largely under-utilized. Drastic cost reductions in sequencing and other omics technology have also facilitated the ability for deep phenotyping of livestock at the molecular level. These advances have brought the animal sciences to a cross-roads in data science where increased training is needed to manage, record, and analyze data to generate knowledge and advances in Agriscience related disciplines. This paper describes the opportunities and challenges in using high-throughput phenotyping, “big data,” analytics, and related technologies in the livestock industry based on discussions at the Livestock High-Throughput Phenotyping and Big Data Analytics meeting, held in November 2017 (see: https://www.animalgenome.org/bioinfo/community/workshops/2017/). Critical needs for investments in infrastructure for people (e.g., “big data” training), data (e.g., data transfer, management, and analytics), and technology (e.g., development of low cost sensors) were defined by this group. Though some subgroups of animal science have extensive experience in predictive modeling, cross-training in computer science, statistics, and related disciplines are needed to use big data for diverse applications in the field. Extensive opportunities exist for public and private entities to harness big data to develop valuable research knowledge and products to the benefit of society under the increased demands for food in a rapidly growing population.
|Original language||English (US)|
|Journal||Frontiers in Genetics|
|State||Published - Dec 17 2019|
Bibliographical noteFunding Information:
We would like to acknowledge all participants of the Livestock High-Throughput Phenotyping (HTP) and Big Data Analytics meeting. In addition, we thank Zhiliang Hu for creating the meeting website, Janice Boarman and Loren Coleman for assistance with meeting logistics, and all of the participants who attended the Livestock HTP and big data meeting, who contributed valuable feedback.
This meeting was supported by a competitive USDA-NIFA grant # 2017-67015-26907.
© Copyright © 2019 Koltes, Cole, Clemmens, Dilger, Kramer, Lunney, McCue, McKay, Mateescu, Murdoch, Reuter, Rexroad, Rosa, Serão, White, Woodward-Greene, Worku, Zhang and Reecy.
- automated phenotyping
- precision agriculture
- precision livestock farming