A LC-MS/MS method for the analysis of intracellular nucleoside triphosphate levels

  • Ping Chen
  • , Zhongfa Liu
  • , Shujun Liu
  • , Zhiliang Xie
  • , Josephine Aimiuwu
  • , Jiuxia Pang
  • , Rebecca Klisovic
  • , William Blum
  • , Michael R. Grever
  • , Guido Marcucci
  • , Kenneth K. Chan

Research output: Contribution to journalArticlepeer-review

54 Scopus citations

Abstract

Purpose: To simultaneously quantify intracellular nucleoside triphosphate (NTP) and deoxynucleoside triphosphate (dNTP) pools and to assess their changes produced by interfering with ribonucleotide reductase (RNR) expression in leukemia cells. Methods: A HPLC-MS/MS system was used to quantify intracellular NTP and dNTP pools. Results: The assay was linear between 50 nM, the lower limit of quantification (LLOQ), and 10 μM in cell lysate. The within-day coefficients of variation (CVs, n∈=∈5) were found to be 12.0-18.0% at the LLOQ and 3.0-9.0% between 500 and 5,000 nM for dNTPs and 8.0-15.0% and 2.0-6.0% for NTPs. The between-day CVs (n∈=∈5) were 9.0-13.0% and 3.0-11.0% for dNTPs and 9.0-13.0% and 3.0-6.0% for NTPs. The within-day accuracy values were 93.0-119.0% for both NTPs and dNTPs. ATP overlapped with dGTP and they were analyzed as a composite. This method was applied to measure basal intracellular dNTPs/NTPs in five leukemia cell lines exposed to the RNR antisense GTI-2040. Following drug treatment, dCTP and dATP levels were found to decrease significantly in MV4-11 and K562 cells. Additionally, perturbation of dNTP/NTP levels in bone marrow sample of a patient treated with GTI-2040 was detected. Conclusions: This method provides a practical tool to measure intracellular dNTP/NTP levels in cells and clinical samples.

Original languageEnglish (US)
Pages (from-to)1504-1515
Number of pages12
JournalPharmaceutical research
Volume26
Issue number6
DOIs
StatePublished - Jun 2009
Externally publishedYes

Bibliographical note

Funding Information:
This work was supported in part by the National Cancer Research Institute, Bethesda, MD, RO1 CA102031 (P.I. GM) and by the Biomedical Mass Spectrometry Laboratory, The Ohio State University.

Keywords

  • DNTP/NTP levels
  • GTI-2040
  • LC-MS/MS

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