A general modeling framework for open wildlife populations based on the Polya tree prior

Alex Diana, Eleni Matechou, Jim Griffin, Todd Arnold, Simone Tenan, Stefano Volponi

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

Wildlife monitoring for open populations can be performed using a number of different survey methods. Each survey method gives rise to a type of data and, in the last five decades, a large number of associated statistical models have been developed for analyzing these data. Although these models have been parameterized and fitted using different approaches, they have all been designed to either model the pattern with which individuals enter and/or exit the population, or to estimate the population size by accounting for the corresponding observation process, or both. However, existing approaches rely on a predefined model structure and complexity, either by assuming that parameters linked to the entry and exit pattern (EEP) are specific to sampling occasions, or by employing parametric curves to describe the EEP. Instead, we propose a novel Bayesian nonparametric framework for modeling EEPs based on the Polya tree (PT) prior for densities. Our Bayesian nonparametric approach avoids overfitting when inferring EEPs, while simultaneously allowing more flexibility than is possible using parametric curves. Finally, we introduce the replicate PT prior for defining classes of models for these data allowing us to impose constraints on the EEPs, when required. We demonstrate our new approach using capture–recapture, count, and ring-recovery data for two different case studies.

Original languageEnglish (US)
Pages (from-to)2171-2183
Number of pages13
JournalBiometrics
Volume79
Issue number3
DOIs
StatePublished - Sep 2023

Bibliographical note

Publisher Copyright:
© 2022 The Authors. Biometrics published by Wiley Periodicals LLC on behalf of International Biometric Society.

Keywords

  • Bayesian nonparametrics
  • Polya tree
  • capture–recapture
  • count data
  • ring recovery
  • statistical ecology

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