A database for animal tuberculosis (mycoDB.es) within the context of the Spanish national programme for eradication of bovine tuberculosis

Spanish Network on Surveillance Monitoring of Animal Tuberculosis

doi:10.1016/j.meegid.2011.10.008

A database for animal tuberculosis (mycoDB.es) within the context of the Spanish national programme for eradication of bovine tuberculosis

Spanish Network on Surveillance Monitoring of Animal Tuberculosis

Veterinary Population Medicine

Research output: Contribution to journal › Article › peer-review

31 Scopus citations

Abstract

Spoligotyping and mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRUVNTR) analysis are the international standard techniques for molecular typing of members of the Mycobacterium tuberculosis complex. To enable the exploitation of molecular typing data for epidemiological purposes, the creation of large databases is indispensable. Here we describe mycoDB.es, a database for animal tuberculosis which forms part of the Spanish national programme for eradication of bovine tuberculosis. This database has been created as an epidemiological tool at national level and contains spoligotype patterns of 17,273 isolates clustered in 401 different spoligotypes of Mycobacterium bovis, Mycobacterium caprae and M. tuberculosis. The database offers an overview of the present spoligotypes, to a lower extent also of MIRU-VNTR types, affected animal species and furthermore of the spatial distribution of these genotypes.

Original language	English (US)
Pages (from-to)	877-882
Number of pages	6
Journal	Infection, Genetics and Evolution
Volume	12
Issue number	4
DOIs	https://doi.org/10.1016/j.meegid.2011.10.008
State	Published - Jun 1 2012

Bibliographical note

Funding Information:
The database on animal tuberculosis is financed by and in the possession of the Spanish Ministry of the Environment, Rural and Marine Affairs (MARM) . S. Rodriguez-Campos was financed by PhD studentship AP2006-01630 of the Spanish Ministry of Education. The continuous encouragement of L. Carbajo and B. Muñóz (MARM) is very much appreciated. We would like to acknowledge the excellent technical assistance of C. Ancochea and E. Celeiro (Computer and Communication Unit, VISAVET Centre), F. Lozano, N. Moya, T. Alende, A. Gutiérrez, C. Viñolo, L. Guijarro, J. Gimeno and E. Mateos (Mycobacteria Unit, VISAVET Centre) and Tragsatec S.A. (Tragsa Group, Madrid).

Publisher Copyright:
© 2011 Elsevier B.V. All rights reserved.

Keywords

Animal tuberculosis
Database
Epidemiology
Molecular typing

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

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10.1016/j.meegid.2011.10.008

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@article{57f1f581901443c6ae672e0e579c2acc,

title = "A database for animal tuberculosis (mycoDB.es) within the context of the Spanish national programme for eradication of bovine tuberculosis",

abstract = "Spoligotyping and mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRUVNTR) analysis are the international standard techniques for molecular typing of members of the Mycobacterium tuberculosis complex. To enable the exploitation of molecular typing data for epidemiological purposes, the creation of large databases is indispensable. Here we describe mycoDB.es, a database for animal tuberculosis which forms part of the Spanish national programme for eradication of bovine tuberculosis. This database has been created as an epidemiological tool at national level and contains spoligotype patterns of 17,273 isolates clustered in 401 different spoligotypes of Mycobacterium bovis, Mycobacterium caprae and M. tuberculosis. The database offers an overview of the present spoligotypes, to a lower extent also of MIRU-VNTR types, affected animal species and furthermore of the spatial distribution of these genotypes.",

keywords = "Animal tuberculosis, Database, Epidemiology, Molecular typing",

author = "{Spanish Network on Surveillance Monitoring of Animal Tuberculosis} and Sabrina Rodriguez-Campos and Sergio Gonz{\'a}lez and {De Juan}, Luc{\'i}a and Beatriz Romero and Javier Bezos and Carmen Casal and Fern{\'a}ndez-De-Mera, {Isabel G.} and Elena Castellanos and Ana Mateos and S{\'a}ez-Llorente, {Jos{\'e} L.} and Lucas Dom{\'i}nguez and Alicia Aranaz and F. Garrido and C. Fornell and G{\'o}mez, {J. M.} and Julio Alvarez and I. Mu{\~n}oz and T{\'e}llez, {J. A.} and Villalba, {E. J.} and N. Abacens and I. Belanche and J. Gracia and S. Izquierdo and Malo, {J. M.} and Copano, {M. F.} and E. Fern{\'a}ndez and I. Merediz and P. Pel{\'a}ez and C. Pieltain and V. Vigo and C. Fern{\'a}ndez and Fern{\'a}ndez, {F. M.} and Gradillas, {M. G.} and M. Guti{\'e}rrez and E. Sola and V. Alcaide and J. Alia and J. Alonso and Berm{\'u}dez, {M. R.} and C. Fern{\'a}ndez and P. Garc{\'i}a and E. Grande and F. Plaza and Rando, {M. L.} and C. Rojas and A. S{\'a}nchez and Vi{\~n}uelas, {J. A.} and Anguiano, {J. A.} and I. Bur{\'o}n",

note = "Funding Information: The database on animal tuberculosis is financed by and in the possession of the Spanish Ministry of the Environment, Rural and Marine Affairs (MARM) . S. Rodriguez-Campos was financed by PhD studentship AP2006-01630 of the Spanish Ministry of Education. The continuous encouragement of L. Carbajo and B. Mu{\~n}{\'o}z (MARM) is very much appreciated. We would like to acknowledge the excellent technical assistance of C. Ancochea and E. Celeiro (Computer and Communication Unit, VISAVET Centre), F. Lozano, N. Moya, T. Alende, A. Guti{\'e}rrez, C. Vi{\~n}olo, L. Guijarro, J. Gimeno and E. Mateos (Mycobacteria Unit, VISAVET Centre) and Tragsatec S.A. (Tragsa Group, Madrid). Publisher Copyright: {\textcopyright} 2011 Elsevier B.V. All rights reserved.",

year = "2012",

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day = "1",

doi = "10.1016/j.meegid.2011.10.008",

language = "English (US)",

volume = "12",

pages = "877--882",

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T1 - A database for animal tuberculosis (mycoDB.es) within the context of the Spanish national programme for eradication of bovine tuberculosis

AU - Spanish Network on Surveillance Monitoring of Animal Tuberculosis

AU - Rodriguez-Campos, Sabrina

AU - González, Sergio

AU - De Juan, Lucía

AU - Romero, Beatriz

AU - Bezos, Javier

AU - Casal, Carmen

AU - Fernández-De-Mera, Isabel G.

AU - Castellanos, Elena

AU - Mateos, Ana

AU - Sáez-Llorente, José L.

AU - Domínguez, Lucas

AU - Aranaz, Alicia

AU - Garrido, F.

AU - Fornell, C.

AU - Gómez, J. M.

AU - Alvarez, Julio

AU - Muñoz, I.

AU - Téllez, J. A.

AU - Villalba, E. J.

AU - Abacens, N.

AU - Belanche, I.

AU - Gracia, J.

AU - Izquierdo, S.

AU - Malo, J. M.

AU - Copano, M. F.

AU - Fernández, E.

AU - Merediz, I.

AU - Peláez, P.

AU - Pieltain, C.

AU - Vigo, V.

AU - Fernández, C.

AU - Fernández, F. M.

AU - Gradillas, M. G.

AU - Gutiérrez, M.

AU - Sola, E.

AU - Alcaide, V.

AU - Alia, J.

AU - Alonso, J.

AU - Bermúdez, M. R.

AU - Fernández, C.

AU - García, P.

AU - Grande, E.

AU - Plaza, F.

AU - Rando, M. L.

AU - Rojas, C.

AU - Sánchez, A.

AU - Viñuelas, J. A.

AU - Anguiano, J. A.

AU - Burón, I.

N1 - Funding Information: The database on animal tuberculosis is financed by and in the possession of the Spanish Ministry of the Environment, Rural and Marine Affairs (MARM) . S. Rodriguez-Campos was financed by PhD studentship AP2006-01630 of the Spanish Ministry of Education. The continuous encouragement of L. Carbajo and B. Muñóz (MARM) is very much appreciated. We would like to acknowledge the excellent technical assistance of C. Ancochea and E. Celeiro (Computer and Communication Unit, VISAVET Centre), F. Lozano, N. Moya, T. Alende, A. Gutiérrez, C. Viñolo, L. Guijarro, J. Gimeno and E. Mateos (Mycobacteria Unit, VISAVET Centre) and Tragsatec S.A. (Tragsa Group, Madrid). Publisher Copyright: © 2011 Elsevier B.V. All rights reserved.

PY - 2012/6/1

Y1 - 2012/6/1

N2 - Spoligotyping and mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRUVNTR) analysis are the international standard techniques for molecular typing of members of the Mycobacterium tuberculosis complex. To enable the exploitation of molecular typing data for epidemiological purposes, the creation of large databases is indispensable. Here we describe mycoDB.es, a database for animal tuberculosis which forms part of the Spanish national programme for eradication of bovine tuberculosis. This database has been created as an epidemiological tool at national level and contains spoligotype patterns of 17,273 isolates clustered in 401 different spoligotypes of Mycobacterium bovis, Mycobacterium caprae and M. tuberculosis. The database offers an overview of the present spoligotypes, to a lower extent also of MIRU-VNTR types, affected animal species and furthermore of the spatial distribution of these genotypes.

AB - Spoligotyping and mycobacterial interspersed repetitive unit-variable number tandem repeat (MIRUVNTR) analysis are the international standard techniques for molecular typing of members of the Mycobacterium tuberculosis complex. To enable the exploitation of molecular typing data for epidemiological purposes, the creation of large databases is indispensable. Here we describe mycoDB.es, a database for animal tuberculosis which forms part of the Spanish national programme for eradication of bovine tuberculosis. This database has been created as an epidemiological tool at national level and contains spoligotype patterns of 17,273 isolates clustered in 401 different spoligotypes of Mycobacterium bovis, Mycobacterium caprae and M. tuberculosis. The database offers an overview of the present spoligotypes, to a lower extent also of MIRU-VNTR types, affected animal species and furthermore of the spatial distribution of these genotypes.

KW - Animal tuberculosis

KW - Database

KW - Epidemiology

KW - Molecular typing

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VL - 12

SP - 877

EP - 882

JO - Infection, Genetics and Evolution

JF - Infection, Genetics and Evolution

SN - 1567-1348

IS - 4

ER -

A database for animal tuberculosis (mycoDB.es) within the context of the Spanish national programme for eradication of bovine tuberculosis

Abstract

Bibliographical note

Keywords

UN SDGs

Access

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