A Bayesian 2D functional linear model for gray-level co-occurrence matrices in texture analysis of lower grade gliomas

Thierry Chekouo, Shariq Mohammed, Arvind Rao

Research output: Contribution to journalArticlepeer-review

13 Scopus citations

Abstract

In cancer radiomics, textural features evaluated from image intensity-derived gray-level co-occurrence matrices (GLCMs) have been studied to evaluate gray-level spatial dependence within the regions of interest in the brain. Most of these analysis work with summary statistics (or texture-based features) constructed using the GLCM entries, and potentially overlook other structural properties in the GLCM. In our proposed Bayesian framework, we treat each GLCM as a realization of a two-dimensional stochastic functional process observed with error at discrete time points. The latent process is then combined with the outcome model to evaluate the prediction performance. We use simulation studies to assess the performance of our method and apply it to data collected from individuals with lower grade gliomas. We found our approach to outperform competing methods that use only summary statistics to predict isocitrate dehydrogenase (IDH) mutation status.

Original languageEnglish (US)
Article number102437
JournalNeuroImage: Clinical
Volume28
DOIs
StatePublished - Jan 2020
Externally publishedYes

Bibliographical note

Publisher Copyright:
© 2020 The Authors

Keywords

  • 2D functional data
  • Bayesian variable selection
  • GLCM
  • Imaging sequences
  • Lower grade glioma
  • Texture analysis

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