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Whole-cell protein and ITS rDNA profiles as diagnostic tools to discriminate Fusarium avenaceum intraspecific variability and associated virulence
Vujanovic, V., Vidovic, S., Fernandez, M. R., Daida, P. & Korber, D., Feb 1 2009, In: Canadian Journal of Microbiology. 55, 2, p. 117-125 9 p.Research output: Contribution to journal › Article › peer-review
7 Scopus citations -
Whole-cell screen of fragment library identifies gut microbiota metabolite indole propionic acid as antitubercular
Negatu, D. A., Liu, J. J. J., Zimmerman, M., Kaya, F., Dartois, V., Aldrich, C. C., Gengenbacher, M. & Dicka, T., Mar 2018, In: Antimicrobial agents and chemotherapy. 62, 3, e01571-17.Research output: Contribution to journal › Article › peer-review
Open Access38 Scopus citations -
Whole ecosystem manipulation: A productive avenue for test system research?
Perry, J. A. & Troelstrup, N. H., Nov 1988, In: Environmental Toxicology and Chemistry. 7, 11, p. 941-951 11 p.Research output: Contribution to journal › Article › peer-review
14 Scopus citations -
Whole ecosystem manipulation experiments: The search for generality
Perry, J. A., Troelstrup, N. H., Newsom, M. & Shelley, B., 1987, Water Science and Technology. 11 ed. Vol. 19. p. 55-71 17 p.Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
13 Scopus citations -
Whole egg consumption and cortical bone in healthy children
Coheley, L. M., Kindler, J. M., Laing, E. M., Oshri, A., Hill Gallant, K. M., Warden, S. J., Peacock, M., Weaver, C. M. & Lewis, R. D., Aug 2018, In: Osteoporosis International. 29, 8, p. 1783-1791 9 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Whole exome sequencing frequently detects a monogenic cause in early onset nephrolithiasis and nephrocalcinosis
Daga, A., Majmundar, A. J., Braun, D. A., Gee, H. Y., Lawson, J. A., Shril, S., Jobst-Schwan, T., Vivante, A., Schapiro, D., Tan, W., Warejko, J. K., Widmeier, E., Nelson, C. P., Fathy, H. M., Gucev, Z., Soliman, N. A., Hashmi, S., Halbritter, J., Halty, M., Kari, J. A., & 18 others , Jan 2018, In: Kidney international. 93, 1, p. 204-213 10 p.Research output: Contribution to journal › Article › peer-review
Open Access93 Scopus citations -
Whole-Exome Sequencing Identifies Loci Associated with Blood Cell Traits and Reveals a Role for Alternative GFI1B Splice Variants in Human Hematopoiesis
Polfus, L. M., Khajuria, R. K., Schick, U. M., Pankratz, N., Pazoki, R., Brody, J. A., Chen, M. H., Auer, P. L., Floyd, J. S., Huang, J., Lange, L., van Rooij, F. J. A., Gibbs, R. A., Metcalf, G., Muzny, D., Veeraraghavan, N., Walter, K., Chen, L., Yanek, L., Becker, L. C., & 36 others , Aug 4 2016, In: American Journal of Human Genetics. 99, 2, p. 481-488 8 p.Research output: Contribution to journal › Article › peer-review
Open Access34 Scopus citations -
Whole-exome sequencing identifies rare and low-frequency coding variants associated with LDL cholesterol
Lange, L. A., Hu, Y., Zhang, H., Xue, C., Schmidt, E. M., Tang, Z. Z., Bizon, C., Lange, E. M., Smith, J. D., Turner, E. H., Jun, G., Kang, H. M., Peloso, G., Auer, P., Li, K. P., Flannick, J., Zhang, J., Fuchsberger, C., Gaulton, K., Lindgren, C., & 82 others , Feb 6 2014, In: American Journal of Human Genetics. 94, 2, p. 233-245 13 p.Research output: Contribution to journal › Article › peer-review
170 Scopus citations -
Whole Exome Sequencing Identifies Somatic Variants in an Oral Composite Hemangioendothelioma Characterized by YAP1-MAML2 Fusion
Koutlas, I. G., Oetting, W. S., Burns, G. M., Gopalakrishnan, R. & Antonescu, C. R., 2021, (Accepted/In press) In: Head and Neck Pathology.Research output: Contribution to journal › Article › peer-review
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Whole-exome sequencing in 415,422 individuals identifies rare variants associated with mitochondrial DNA copy number
Pillalamarri, V., Shi, W., Say, C., Yang, S., Lane, J., Guallar, E., Pankratz, N. & Arking, D. E., Jan 12 2023, In: Human Genetics and Genomics Advances. 4, 1, 100147.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Whole exome sequencing in patients with Williams–Beuren syndrome followed by disease modeling in mice points to four novel pathways that may modify stenosis risk
Parrish, P. C. R., Liu, D., Knutsen, R. H., Billington, C. J., Mecham, R. P., Fu, Y. P. & Kozel, B. A., 2021, In: Human molecular genetics. 29, 12, p. 2035-2050 16 p.Research output: Contribution to journal › Article › peer-review
Open Access10 Scopus citations -
Whole-exome sequencing of 14 389 individuals from the ESP and CHARGE consortia identifies novel rare variation associated with hemostatic factors
Pankratz, N., Wei, P., Brody, J. A., Chen, M. H., de Vries, P. S., Huffman, J. E., Stimson, M. R., Auer, P. L., Boerwinkle, E., Cushman, M., de Maat, M. P. M., Folsom, A. R., Franco, O. H., Gibbs, R. A., Haagenson, K. K., Hofman, A., Johnsen, J. M., Kovar, C. L., Kraaij, R., McKnight, B., & 11 others , Sep 10 2022, In: Human molecular genetics. 31, 18, p. 3120-3132 13 p.Research output: Contribution to journal › Article › peer-review
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Whole genome amplification and sequencing of a Daphnia resting egg
Lack, J. B., Weider, L. J. & Jeyasingh, P. D., Jan 2018, In: Molecular Ecology Resources. 18, 1, p. 118-127 10 p.Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Whole-genome analyses resolve early branches in the tree of life of modern birds
Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., Ho, S. Y. W., Faircloth, B. C., Nabholz, B., Howard, J. T., Suh, A., Weber, C. C., Da Fonseca, R. R., Li, J., Zhang, F., Li, H., Zhou, L., Narula, N., Liu, L., Ganapathy, G., & 85 others , Dec 12 2014, In: Science. 346, 6215, p. 1320-1331 12 p.Research output: Contribution to journal › Article › peer-review
1161 Scopus citations -
Whole-genome assembly and annotation of northern wild rice, Zizania palustris L., supports a whole-genome duplication in the Zizania genus
Haas, M., Kono, T., Macchietto, M., Millas, R., McGilp, L., Shao, M., Duquette, J., Qiu, Y., Hirsch, C. N. & Kimball, J., Sep 2021, In: Plant Journal. 107, 6, p. 1802-1818 17 p.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Whole-genome association analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program
TOPMed Sleep Working Group & NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Dec 2021, In: Genome medicine. 13, 1, 136.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Whole-genome association mapping in elite inbred crop varieties
Waugh, R., Marshall, D., Thomas, B., Comadran, J., Russell, J., Close, T., Stein, N., Hayes, P., Muehlbauer, G., Cockram, J., O'Sullivan, D., MacKay, I., Flavell, A. & Ramsay, L., 2010, In: Genome. 53, 11, p. 967-972 6 p.Research output: Contribution to journal › Article › peer-review
19 Scopus citations -
Whole genome association study of brain-wide imaging phenotypes for identifying quantitative trait loci in MCI and AD: A study of the ADNI cohort
Shen, L., Kim, S., Risacher, S. L., Nho, K., Swaminathan, S., West, J. D., Foroud, T., Pankratz, N., Moore, J. H., Sloan, C. D., Huentelman, M. J., Craig, D. W., DeChairo, B. M., Potkin, S. G., Jack, C. R., Weiner, M. W. & Saykin, A. J., Nov 2010, In: NeuroImage. 53, 3, p. 1051-1063 13 p.Research output: Contribution to journal › Article › peer-review
268 Scopus citations -
Whole-genome characterization and comparative genomics of a novel freshwater cyanobacteria species: Pseudanabaena punensis
Nitnaware, K. M., Raskar, K. B., Agarwal, G., Chávez Montes, R. A., Chopra, R., López-Arredondo, D. L., Nikam, T. D. & Patil, G. B., Nov 2021, In: Molecular Phylogenetics and Evolution. 164, 107272.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Whole-genome differentially hydroxymethylated DNA regions among twins discordant for cardiovascular death
Dai, J., Leung, M., Guan, W., Guo, H. T., Krasnow, R. E., Wang, T. J., El-rifai, W., Zhao, Z. & Reed, T., Aug 2021, In: Genes. 12, 8, 1183.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Whole-genome microRNA expression profiling identifies a 5-microRNA signature as a prognostic biomarker in Chinese patients with primary glioblastoma multiforme
Zhang, W., Zhang, J., Yan, W., You, G., Bao, Z., Li, S., Kang, C., Jiang, C., You, Y., Zhang, Y., Chen, C. C., Song, S. W. & Jiang, T., Feb 15 2013, In: Cancer. 119, 4, p. 814-824 11 p.Research output: Contribution to journal › Article › peer-review
Open Access77 Scopus citations -
Whole-genome nucleotide diversity, recombination, and linkage disequilibrium in the model legume Medicago truncatula
Branca, A., Paape, T. D., Zhou, P., Briskine, R., Farmer, A. D., Mudge, J., Bharti, A. K., Woodward, J. E., May, G. D., Gentzbittel, L., Ben, C., Denny, R., Sadowsky, M. J., Ronfort, J., Bataillon, T., Young, N. D. & Tiffin, P. L., Oct 18 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 42, p. E864-E870Research output: Contribution to journal › Article › peer-review
Open Access172 Scopus citations -
Whole-genome resequencing reveals extensive natural variation in the model green alga chlamydomonas reinhardtii
Flowers, J. M., Hazzouri, K. M., Pham, G. M., Rosas, U., Bahmani, T., Khraiwesh, B., Nelson, D. R., Jijakli, K., Abdrabu, R., Harris, E. H., Lefebvre, P. A., Hom, E. F. Y., Salehi-Ashtiani, K. & Purugganan, M. D., 2015, In: Plant Cell. 27, 9, p. 2353-2369 17 p.Research output: Contribution to journal › Article › peer-review
49 Scopus citations -
Whole-genome re-sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad-based resistance to soybean cyst nematode
Patil, G. B., Lakhssassi, N., Wan, J., Song, L., Zhou, Z., Klepadlo, M., Vuong, T. D., Stec, A. O., Kahil, S. S., Colantonio, V., Valliyodan, B., Rice, J. H., Piya, S., Hewezi, T., Stupar, R. M., Meksem, K. & Nguyen, H. T., Aug 2019, In: Plant Biotechnology Journal. 17, 8, p. 1595-1611 17 p.Research output: Contribution to journal › Article › peer-review
Open Access39 Scopus citations -
Whole genome sequence analysis of blood lipid levels in >66,000 individuals
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Dec 2022, In: Nature communications. 13, 1, 5995.Research output: Contribution to journal › Article › peer-review
Open Access -
Whole genome sequence analysis of platelet traits in the NHLBI Trans-Omics for Precision Medicine (TOPMed) initiative
Little, A., Hu, Y., Sun, Q., Jain, D., Broome, J., Chen, M. H., Thibord, F., Mchugh, C., Surendran, P., Blackwell, T. W., Brody, J. A., Bhan, A., Chami, N., De Vries, P. S., Ekunwe, L., Heard-Costa, N., Hobbs, B. D., Manichaikul, A., Moon, J. Y., Preuss, M. H., & 47 others , Feb 1 2022, In: Human molecular genetics. 31, 3, p. 347-361 15 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Whole-genome sequence analysis reveals unique SNP profiles to distinguish vaccine and wild-type strains of bovine herpesvirus-1 (BoHV-1)
Chothe, S. K., Sebastian, A., Thomas, A., Nissly, R. H., Wolfgang, D., Byukusenge, M., Mor, S. K., Goyal, S. M., Albert, I., Tewari, D., Jayarao, B. M. & Kuchipudi, S. V., Sep 2018, In: Virology. 522, p. 27-36 10 p.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Whole genome sequence association analysis of fasting glucose and fasting insulin levels in diverse cohorts from the NHLBI TOPMed program
DiCorpo, D., Gaynor, S. M., Russell, E. M., Westerman, K. E., Raffield, L. M., Majarian, T. D., Wu, P., Sarnowski, C., Highland, H. M., Jackson, A., Hasbani, N. R., de Vries, P. S., Brody, J. A., Hidalgo, B., Guo, X., Perry, J. A., O’Connell, J. R., Lent, S., Montasser, M. E., Cade, B. E., & 73 others , Dec 2022, In: Communications biology. 5, 1, 756.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Whole genome sequence association with E-selectin levels reveals loss-of-function variant in African Americans
Polfus, L. M., Raffield, L. M., Wheeler, M. M., Tracy, R. P., Lange, L. A., Lettre, G., Miller, A., Correa, A., Bowler, R. P., Bis, J. C., Salimi, S., Jenny, N. S., Pankratz, N., Wang, B., Preuss, M. H., Zhou, L., Moscati, A., Nadkarni, G. N., Loos, R. J. F., Zhong, X., & 5 others , Feb 1 2019, In: Human molecular genetics. 28, 3, p. 515-523 9 p.Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Whole-genome sequences of 18 bovine alphaherpesvirus 1 field isolates from Pennsylvania and Minnesota
Chothe, S. K., Sebastian, A., Thomas, A., Nissly, R., Byukusenge, M., Wolfgang, D., Mor, S. K., Goyal, S., Albert, I., Jayarao, B. & Kuchipudi, S. V., Apr 1 2018, In: Genome Announcements. 6, 17, e00294-18.Research output: Contribution to journal › Article › peer-review
Open Access -
Whole-genome sequencing and concordance between antimicrobial susceptibility genotypes and phenotypes of bacterial isolates associated with bovine respiratory disease
Owen, J. R., Noyes, N., Young, A. E., Prince, D. J., Blanchard, P. C., Lehenbauer, T. W., Aly, S. S., Davis, J. H., O'Rourke, S. M., Abdo, Z., Belk, K., Miller, M. R., Morley, P. & Van Eenennaam, A. L., Sep 1 2017, In: G3: Genes, Genomes, Genetics. 7, 9, p. 3059-3071 13 p.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Hu, Y., Stilp, A. M., McHugh, C. P., Rao, S., Jain, D., Zheng, X., Lane, J., Méric de Bellefon, S., Raffield, L. M., Chen, M. H., Yanek, L. R., Wheeler, M., Yao, Y., Ren, C., Broome, J., Moon, J. Y., de Vries, P. S., Hobbs, B. D., Sun, Q., & 31 others , May 6 2021, In: American Journal of Human Genetics. 108, 5, p. 874-893 20 p.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Whole genome sequencing identified a 16 kilobase deletion on ECA13 associated with distichiasis in Friesian horses
Hisey, E. A., Hermans, H., Lounsberry, Z. T., Avila, F., Grahn, R. A., Knickelbein, K. E., Duward-Akhurst, S. A., McCue, M. E., Kalbfleisch, T. S., Lassaline, M. E., Back, W. & Bellone, R. R., Dec 2020, In: BMC Genomics. 21, 1, 848.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Whole Genome Sequencing Identifies CRISPLD2 as a Lung Function Gene in Children With Asthma
National Heart, Lung, and Blood Institute Trans-Omics for Precision Medicine (TOPMed) Consortium, Dec 2019, In: CHEST. 156, 6, p. 1068-1079 12 p.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
Whole-genome sequencing in diverse subjects identifies genetic correlates of leukocyte traits: The NHLBI TOPMed program
NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium, Oct 7 2021, In: American Journal of Human Genetics. 108, 10, p. 1836-1851 16 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Whole genome sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, incomplete denitrifiers from the United States Great Basin
Murugapiran, S. K., Huntemann, M., Wei, C. L., Han, J., Detter, J. C., Han, C. S., Erkkila, T. H., Teshima, H., Chen, A., Kyrpides, N., Mavrommatis, K., Markowitz, V., Szeto, E., Ivanova, N., Pagani, I., Lam, J., McDonald, A. I., Dodsworth, J. A., Pati, A., Goodwin, L., & 4 others , 2013, In: Genome Announcements. 1, 1, e00106-12.Research output: Contribution to journal › Article › peer-review
Open Access14 Scopus citations -
Whole-genome transcriptional profiling of Bradyrhizobium japonicum during chemoautotrophic growth
Franck, W. L., Chang, W. S., Qiu, J., Sugawara, M., Sadowsky, M. J., Smith, S. A. & Stacey, G., Oct 2008, In: Journal of bacteriology. 190, 20, p. 6697-6705 9 p.Research output: Contribution to journal › Article › peer-review
35 Scopus citations -
Whole genome transcription profiling of Anaplasma phagocytophilum in human and tick host cells by tiling array analysis
Nelson, C. M., Herron, M. J., Felsheim, R. F., Schloeder, B. R., Grindle, S. M., Chavez, A. O., Kurtti, T. J. & Munderloh, U. G., Jul 31 2008, In: BMC Genomics. 9, 364.Research output: Contribution to journal › Article › peer-review
76 Scopus citations -
Whole-genome variation of transposable element insertions in a maize diversity panel
Qiu, Y., O'Connor, C. H., Della Coletta, R. D., Renk, J. S., Monnahan, P. J., Noshay, J. M., Liang, Z., Gilbert, A., Anderson, S. N., McGaugh, S. E., Springer, N. M. & Hirsch, C. N., Sep 27 2021, In: G3: Genes, Genomes, Genetics. 11, 10, jkab238.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Whole globe enucleation versus in situ corneal excision: A study of tissue trauma and contamination
Lane, S. S., Mizener, M. W., Dubbel, P. A., Mindrup, E. A., Wick, A. A., Doughman, D. J. & Holland, E. J., Jul 12 1994, In: Cornea. 13, 4, p. 305-309 5 p.Research output: Contribution to journal › Article › peer-review
22 Scopus citations -
Whole-grain component synergy and cancer
Slavin, J. L., 2006, Food-Drug Synergy and Safety. Thompson, L. & Ward, W. (eds.). CRC Press, p. 175-191 17 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Whole grain consumption and chronic disease: potential mechanisms
Slavin, J. L., Jacobs Jr, D. R. & Marquant, L., Dec 1 1996, In: FASEB Journal. 10, 3Research output: Contribution to journal › Article › peer-review
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Whole-grain consumption and chronic disease: Protective mechanisms
Slavin, J., Jacobs, D. & Marquart, L., Jan 1 1997, In: Nutrition and Cancer. 27, 1, p. 14-21 8 p.Research output: Contribution to journal › Review article › peer-review
196 Scopus citations -
Whole grain consumption and insulin sensitivity
Pereira, M. A., Nov 1 2007, Technology of Functional Cereal Products. Elsevier Inc., p. 112-125 14 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Whole grain consumption has a modest effect on the development of diabetes in the Goto-Kakisaki rat
Youn, M., Csallany, A. S. & Gallaher, D. D., Jan 28 2012, In: British Journal of Nutrition. 107, 2, p. 192-201 10 p.Research output: Contribution to journal › Article › peer-review
16 Scopus citations -
Whole-grain consumption is associated with a reduced risk of noncardiovascular, noncancer death attributed to inflammatory diseases in the Iowa Women's Health Study
Jacobs, D. R., Andersen, L. F. & Blomhoff, R., Jun 1 2007, In: American Journal of Clinical Nutrition. 85, 6, p. 1606-1614 9 p.Research output: Contribution to journal › Article › peer-review
Open Access139 Scopus citations -
Whole grain consumption trends and associations with body weight measures in the United States: Results from the cross sectional National Health and Nutrition Examination Survey 2001-2012
Albertson, A. M., Reicks, M., Joshi, N. & Gugger, C. K., Jan 22 2016, In: Nutrition Journal. 15, 1, 8.Research output: Contribution to journal › Article › peer-review
Open Access90 Scopus citations -
Whole-grain Continuing Education for School Foodservice Personnel: Keeping Kids from Falling Short
Roth-Yousey, L., Barno, T., Caskey, M., Asche, K. & Reicks, M., Nov 2009, In: Journal of Nutrition Education and Behavior. 41, 6, p. 429-435 7 p.Research output: Contribution to journal › Article › peer-review
13 Scopus citations -
Whole grain food intake and cancer risk
Chatenoud, L., Tavani, A., La Vecchia, C., Jacobs, D. R., Negri, E., Levi, F. & Franceschi, S., Jul 3 1998, In: International Journal of Cancer. 77, 1, p. 24-28 5 p.Research output: Contribution to journal › Article › peer-review
213 Scopus citations -
Whole grain food intake elevates serum enterolactone
Jacobs Jr, D. R., Pereira, M. A., Stumpf, K., Pins, J. J. & Adlercreutz, H., 2002, In: British Journal of Nutrition. 88, 2, p. 111-116 6 p.Research output: Contribution to journal › Article › peer-review
63 Scopus citations