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• 3D genome organization contributes to genome instability at fragile sites

  Sarni, D., Sasaki, T., Irony Tur-Sinai, M., Miron, K., Rivera-Mulia, J. C., Magnuson, B., Ljungman, M., Gilbert, D. M. & Kerem, B., Jul 17 2020, In: Nature communications. 11, 1, p. 3613

  Research output: Contribution to journal › Article › peer-review

  • genome
  • Genomic Instability
  • Genes
  • DNA Replication Timing
  • Genome
  3 Scopus citations

• 3D graphics to virtual reality in medicine: Opportunities and prospective

  Gaasedelen, E. N. & Iaizzo, P. A., Jan 1 2018, Engineering in Medicine: Advances and Challenges. Elsevier, p. 201-218 18 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Medical imaging
  • Medicine
  • Tomography
  • Physical properties
  • Virtual reality
  1 Scopus citations

• 3D Hand Scanning to Digital Draping for Glove Design

  Griffin, L., Seifert, E., Curry, C. & Sokolowski, S., Jan 1 2020, Advances in Interdisciplinary Practice in Industrial Design - Proceedings of the AHFE International Conference on Interdisciplinary Practice in Industrial Design, 2019. Shin, C. S. (ed.). Springer Verlag, p. 112-123 12 p. (Advances in Intelligent Systems and Computing; vol. 968).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Scanning
  2 Scopus citations

• 3D hydrodynamic simulations of C ingestion into a convective O shell

  Andrassy, R., Herwig, F., Woodward, P. & Ritter, C., Jan 1 2020, In: Monthly Notices of the Royal Astronomical Society. 491, 1, p. 972-992 21 p.

  Research output: Contribution to journal › Article › peer-review

  • ingestion
  • shell
  • hydrodynamics
  • supernovae
  • luminosity
  8 Scopus citations

• 3D Imaging: Taking a closer look at whole organisms

  Ichino, N. & Ekker, S. C., Jun 2019, In: eLife. 8, e48340.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Zebrafish
  • Individuality
  • X rays
  • X-Rays
  • Imaging techniques
  1 Scopus citations

• 3-Dimensional nature-based therapeutics in pediatric patients with total pancreatectomy and islet auto-transplant

  Kucher, N., Larson, J. M., Fischer, G., Mertaugh, M., Peterson, L. & Gershan, L. A., Jan 2020, In: Complementary Therapies in Medicine. 48, 102249.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Pancreatectomy
  • Virtual Reality
  • Pediatrics
  • Transplants
  • Equipment and Supplies

• 3 Dimensional photonic scans for measuring body volume and muscle mass in the standing horse

  Valberg, S. J., Borer Matsui, A. K., Firshman, A. M., Bookbinder, L., Katzman, S. A. & Finno, C. J., 2020, In: PloS one. 15, 2, e0229656.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Optics and Photonics
  • photonics
  • Photonics
  • Torso
  • Muscle

• 3-Dimensional printing to predict paravalvular regurgitation after transcatheter aortic valve replacement

  Reiff, C., Zhingre Sanchez, J. D., Mattison, L. M., Iaizzo, P. A., Garcia, S., Raveendran, G. & Gurevich, S., Dec 2020, In: Catheterization and Cardiovascular Interventions. 96, 7, p. E703-E710

  Research output: Contribution to journal › Article › peer-review

  • Three-Dimensional Printing
  • Transcatheter Aortic Valve Replacement
  • Netherlands
  • Calcification of Aortic Valve
  • Tomography
  2 Scopus citations

• 3D Integration for VLSI Systems

  Tan, C. S., Chen, K. N. & Koester, S. J., Sep 30 2011, Pan Stanford Publishing Pte. Ltd.

  Research output: Book/Report › Book

  • Three dimensional integrated circuits
  • Integrated circuits
  • Silicon
  • Economics
  • Bandwidth
  17 Scopus citations

• 3D integration technology - Introduction and overview

  Tan, C. S., Koester, S. J. & Chen, K. N., Sep 30 2011, 3D Integration for VLSI Systems. Pan Stanford Publishing Pte. Ltd., p. 1-26 26 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter
  3 Scopus citations

• 3D late gadolinium enhancement in a single prolonged breath-hold using supplemental oxygenation and hyperventilation

  Roujol, S., Basha, T. A., Akçakaya, M., Foppa, M., Chan, R. H., Kissinger, K. V., Goddu, B., Berg, S., Manning, W. J. & Nezafat, R., Sep 2014, In: Magnetic resonance in medicine. 72, 3, p. 850-857 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Hyperventilation
  • Gadolinium
  • Respiration
  • Acceleration
  • Heart Ventricles
  8 Scopus citations

• 3D LIDAR-camera intrinsic and extrinsic calibration: Identifiability and analytical least-squares-based initialization

  Mirzaei, F. M., Kottas, D. G. & Roumeliotis, S. I., Apr 2012, In: International Journal of Robotics Research. 31, 4, p. 452-467 16 p.

  Research output: Contribution to journal › Article › peer-review

  • Camera
  • Initialization
  • Calibration
  • Cost functions
  • Least Squares
  100 Scopus citations

• 3D microstructures of Sb₂Te₃ precipitates in PbTe matrix with prediction by a weak compatibility condition

  Chen, X., Cao, S., Ikeda, T., Srivastava, V., Snyder, G. J., Schryvers, D. & James, R. D., Jan 1 2012, 1st International Conference on 3D Materials Science 2012, 3DMS 2012. John Wiley and Sons Inc., p. 125-130 6 p. (1st International Conference on 3D Materials Science 2012, 3DMS 2012).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Precipitates
  • Microstructure
  • Cones
  • Analog to digital conversion
  • Big data

• 3D model processing for high throughput phenotype extraction – the case of corn

  Zermas, D., Morellas, V., Mulla, D. & Papanikolopoulos, N., May 2020, In: Computers and Electronics in Agriculture. 172, 105047.

  Research output: Contribution to journal › Article › peer-review

  • Crops
  • phenotype
  • maize
  • Throughput
  • corn
  5 Scopus citations

• 3D piezoelectric microsystems pop up

  Haghiashtiani, G. & McAlpine, M. C., Jan 1 2019, In: Nature Electronics. 2, 1, p. 15-16 2 p.

  Research output: Contribution to journal › Comment/debate › peer-review

  • Microsystems
  • buckling
  • Buckling

• 3D pose estimation of daily objects using an RGB-D camera

  Choi, C. & Christensen, H. I., Dec 1 2012, 2012 IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS 2012. p. 3342-3349 8 p. 6386067. (IEEE International Conference on Intelligent Robots and Systems).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Cameras
  • Computer aided design
  • Experiments
  63 Scopus citations

• 3D printed cartilage-like tissue constructs with spatially controlled mechanical properties

  Calabrese, M. A., de Melo, B., Jodat, Y., Shin, S. R., Mehrotra, S., Kampermann, T., Santana, M., Alsberg, E. & Leitjen, J., 2019, In: Advanced Functional Materials. 29, 51, p. 1906330

  Research output: Contribution to journal › Article › peer-review

  Open Access
  15 Scopus citations

• 3D printed copper-plastic composite material for use as a radiotherapy bolus

  Ehler, E. D. & Sterling, D. A., Aug 2020, In: Physica Medica. 76, p. 202-206 5 p.

  Research output: Contribution to journal › Article › peer-review

  • radiation therapy
  • Copper
  • Plastics
  • plastics
  • copper
  2 Scopus citations

• 3D printed deformable sensors

  Zhu, Z., Park, H. S. & McAlpine, M. C., Jun 2020, In: Science Advances. 6, 25, eaba5575.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Three-Dimensional Printing
  • Printing
  • Polyethylene Glycol Dimethacrylate Hydrogel
  • Physiologic Monitoring
  • Electric Impedance
  9 Scopus citations

• 3D printed electrically-driven soft actuators

  Haghiashtiani, G., Habtour, E., Park, S. H., Gardea, F. & McAlpine, M. C., May 2018, In: Extreme Mechanics Letters. 21, p. 1-8 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Elastomers
  • Actuators
  • Soft materials
  • Skin
  • Materials properties
  45 Scopus citations

• 3D printed electronic materials and devices

  Su, R., Park, S. H., Li, Z. & Mcalpine, M. C., 2019, Robotic Systems and Autonomous Platforms. Elsevier, p. 309-334

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• 3D Printed Functional and Biological Materials on Moving Freeform Surfaces

  Zhu, Z., Guo, S. Z., Hirdler, T., Eide, C., Fan, X., Tolar, J. & McAlpine, M. C., Jun 6 2018, In: Advanced Materials. 30, 23, 1707495.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Functional materials
  • Biological materials
  • Printing
  • Hydrogels
  • Real time control
  56 Scopus citations

• 3D Printed Neural Regeneration Devices

  Joung, D., Lavoie, N. S., Guo, S. Z., Park, S. H., Parr, A. M. & McAlpine, M. C., Jan 1 2020, In: Advanced Functional Materials. 30, 1, 1906237.

  Research output: Contribution to journal › Article › peer-review

  • regeneration
  • Printing
  • printing
  • Cell signaling
  • Biomolecules
  10 Scopus citations

• 3D Printed Organ Models for Surgical Applications

  Qiu, K., Haghiashtiani, G. & McAlpine, M. C., Jun 12 2018, In: Annual Review of Analytical Chemistry. 11, p. 287-306 20 p.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Planning
  • Printing
  • Computerized tomography
  • Visualization
  • Feedback
  22 Scopus citations

• 3D printed organ models with physical properties of tissue and integrated sensors

  Qiu, K., 2019, Micro- and Nanotechnology Sensors, Systems, and Applications XI. Vol. 10982. 109820D

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

• 3D Printed Organ Models with Physical Properties of Tissue and Integrated Sensors

  Qiu, K., Zhao, Z., Haghiashtiani, G., Guo, S. Z., He, M., Su, R., Zhu, Z., Bhuiyan, D. B., Murugan, P., Meng, F., Park, S. H., Chu, C. C., Ogle, B. M., Saltzman, D. A., Konety, B. R., Sweet, R. M. & McAlpine, M. C., Mar 2018, In: Advanced Materials Technologies. 3, 3, 1700235.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Physical properties
  • Tissue
  • Sensors
  • Ink
  • Pressure sensors
  31 Scopus citations

• 3D printed organ model with integrated electronic device

  McAlpine, M., Qiu, K., Haghiashtiani, G. & Sweet, R., 2019, Patent No. US20190122584A1

  Research output: Patent

• 3D printed patient-specific aortic root models with internal sensors for minimally invasive applications

  Haghiashtiani, G., Qiu, K., Sanchez, J. D. Z., Fuenning, Z. J., Nair, P., Ahlberg, S. E., Iaizzo, P. A. & McAlpine, M. C., Aug 2020, In: Science Advances. 6, 35, eabb4641.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Transcatheter Aortic Valve Replacement
  • Three-Dimensional Printing
  • Minimally Invasive Surgical Procedures
  • Aortic Valve Stenosis
  • In Vitro Techniques
  3 Scopus citations

• 3D Printed Polymer Photodetectors

  Park, S. H., Su, R., Jeong, J., Guo, S. Z., Qiu, K., Joung, D., Meng, F. & McAlpine, M. C., Aug 28 2018, (E-pub ahead of print) In: Advanced Materials. 30, 40, 1803980.

  Research output: Contribution to journal › Article › peer-review

  • Photodetectors
  • Printing
  • Polymers
  • Microfabrication
  • Optoelectronic devices
  39 Scopus citations

• 3D printed quantum dot light-emitting diodes

  Kong, Y. L., Tamargo, I. A., Kim, H., Johnson, B. N., Gupta, M. K., Koh, T. W., Chin, H. A., Steingart, D. A., Rand, B. P. & McAlpine, M. C., Dec 10 2014, In: Nano letters. 14, 12, p. 7017-7023 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Semiconductor quantum dots
  • Light emitting diodes
  • printing
  • light emitting diodes
  • quantum dots
  259 Scopus citations

• 3D printed self-supporting elastomeric structures for multifunctional microfluidics

  Su, R., Wen, J., Su, Q., Wiederoder, M. S., Koester, S. J., Uzarski, J. R. & McAlpine, M. C., Oct 7 2020, In: Science Advances. 6, 41, eabc9846.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • elastomeric
  • Printing
  • Microfluidics
  • Ink
  • Automation
  5 Scopus citations

• 3D Printed Stem-Cell Derived Neural Progenitors Generate Spinal Cord Scaffolds

  Joung, D., Truong, V., Neitzke, C. C., Guo, S. Z., Walsh, P. J., Monat, J. R., Meng, F., Park, S. H., Dutton, J. R., Parr, A. M. & McAlpine, M. C., Sep 26 2018, In: Advanced Functional Materials. 28, 39, 1801850.

  Research output: Contribution to journal › Article › peer-review

  • Stem cells
  • spinal cord
  • stem cells
  • Scaffolds
  • Neurology
  68 Scopus citations

• 3D printing-enabled DNA extraction for long-read genomics

  Agrawal, P., Reifenberger, J. G. & Dorfman, K. D., Aug 25 2020, In: ACS Omega. 5, 33, p. 20817-20824 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Genomics
  • DNA
  • Printing
  • Molecules
  • Nanopores

• 3D Printing Ionogel Auxetic Frameworks for Stretchable Sensors

  Wong, J., Gong, A. T., Defnet, P. A., Meabe, L., Beauchamp, B., Sweet, R. M., Sardon, H., Cobb, C. L. & Nelson, A., Sep 1 2019, In: Advanced Materials Technologies. 4, 9, 1900452.

  Research output: Contribution to journal › Article › peer-review

  • Ink
  • Printing
  • Sensors
  • Ionic conductivity
  • Soft materials
  18 Scopus citations

• 3D printing technology will eventually eliminate the need of purchasing commercial phantoms for clinical medical physics QA procedures

  Ehler, E., Craft, D. & Rong, Y., Jul 2018, In: Journal of Applied Clinical Medical Physics. 19, 4, p. 8-12 5 p.

  Research output: Contribution to journal › Editorial › peer-review

  Open Access
  5 Scopus citations

• 3D reconstruction of a smooth articulated trajectory from a monocular image sequence

  Park, H. S. & Sheikh, Y., Dec 1 2011, 2011 International Conference on Computer Vision, ICCV 2011. p. 201-208 8 p. 6126243. (Proceedings of the IEEE International Conference on Computer Vision).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Trajectories
  • Quadratic programming
  • Cameras
  37 Scopus citations

• 3D reconstruction of microvascular flow phantoms with hybrid imaging modalities

  Lin, J., Hsiung, K., Ritenour, R. & Golzarian, J., May 16 2011, Medical Imaging 2011: Visualization, Image-Guided Procedures, and Modeling. 79642H. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7964).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Multimodal Imaging
  • Phantoms
  • Microspheres
  • Imaging techniques
  • vessels

• 3D Reconstruction of virtual colon structures from colonoscopy images

  Hong, D. H., Tavanapong, W., Wong, J., Oh, J. H. & de Groen, P. C., Jan 1 2014, In: Computerized Medical Imaging and Graphics. 38, 1, p. 22-33 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Colonoscopy
  • Colon
  • Computerized tomography
  • Endoscopy
  • Application programs
  26 Scopus citations

• 3D Semantic Trajectory Reconstruction from 3D Pixel Continuum

  Yoon, J. S., Li, Z. & Park, H. S., Dec 14 2018, Proceedings - 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2018. IEEE Computer Society, p. 5060-5069 10 p. 8578629. (Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Pixels
  • Trajectories
  • Semantics
  • Labels
  • Visibility
  3 Scopus citations

• 3D Simulation in the Apparel Design Curriculum: 50+ Stories from the Digital Frontlines at the Uni

  Dunne, L. E., 2012, Cultivating Change in the Academy: 50+ Stories from the Digital Frontlines at the Uni. Minneapolis, MN: University of Minnesota, p. 37-45

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Curriculum Design
  • Simulation

• 3D social saliency from head-mounted cameras

  Park, H. S., Jain, E. & Sheikh, Y., Jan 1 2012, Advances in Neural Information Processing Systems 25: 26th Annual Conference on Neural Information Processing Systems 2012, NIPS 2012. Neural information processing systems foundation, p. 422-430 9 p. (Advances in Neural Information Processing Systems; vol. 1).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Cameras
  • Cones
  52 Scopus citations

• 3D spatial interaction: Applications for art, design, and science

  Laviola, J. J. & Keefe, D. F., Oct 26 2011, ACM SIGGRAPH 2011 Courses, SIGGRAPH'11. (ACM SIGGRAPH 2011 Courses, SIGGRAPH'11).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Controllers
  • Product design
  • User interfaces
  • Mechanics
  • Navigation
  29 Scopus citations

• 3D textureless object detection and tracking: An edge-based approach

  Choi, C. & Christensen, H. I., Dec 1 2012, 2012 IEEE/RSJ International Conference on Intelligent Robots and Systems, IROS 2012. p. 3877-3884 8 p. 6386065

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Object detection
  • Annealing
  • Costs
  47 Scopus citations

• 3D water quality modeling of a morphologically complex lake, sensitivity and uncertainty analyses, and examples of model applications

  Missaghi, S. & Hondzo, M., Dec 1 2011, MODSIM 2011 - 19th International Congress on Modelling and Simulation - Sustaining Our Future: Understanding and Living with Uncertainty. p. 3747-3753 7 p. (MODSIM 2011 - 19th International Congress on Modelling and Simulation - Sustaining Our Future: Understanding and Living with Uncertainty).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Water Quality
  • Water quality
  • Lakes
  • Uncertainty
  • Modeling
  2 Scopus citations

• 3 Echo: Concept of operations for early care and evacuation of victims of mass violence

  Autrey, A. W., Hick, J. L., Bramer, K., Berndt, J. & Bundt, J., Jan 1 2014, In: Prehospital and Disaster Medicine. 29, 4, p. 421-428 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Violence
  • Emergency Medical Services
  • Curriculum
  14 Scopus citations

• 3-Hydroxypyrimidine-2,4-diones as an Inhibitor Scaffold of HIV Integrase

  Tang, J., Maddali, K., Metifiot, M., Sham, Y. Y., Vince, R., Pommier, Y. & Wang, Z., Apr 14 2011, In: Journal of medicinal chemistry. 54, 7, p. 2282-2292 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Integrase Inhibitors
  • Integrases
  • HIV
  • Antiviral Agents
  • HIV Reverse Transcriptase
  41 Scopus citations

• 3rd workshop on context-aware recommender systems (CARS 2011)

  Adomavicius, G., Baltrunas, L., Hussein, T., Ricci, F. & Tuzhilin, A., Dec 1 2011, In: CEUR Workshop Proceedings. 791

  Research output: Contribution to journal › Conference article › peer-review

  • Information filtering
  • Human engineering
  • Recommender systems
  • Information retrieval
  • Feedback
  2 Scopus citations

• 3rd Workshop on Context-Aware Recommender Systems (CARS 2011)

  Adomavicius, G., Baltrunas, L., Hussein, T., Ricci, F. & Tuzhilin, A., Dec 6 2011, RecSys'11 - Proceedings of the 5th ACM Conference on Recommender Systems. 1 p.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Recommender systems
  7 Scopus citations

• 3-year Outcome of Patients with Persistent Pain after Root Canal Treatment: The National Dental Practice-Based Research Network

  The National Dental Practice-Based Research Network Collaborative Group, May 2020, In: Journal of Endodontics. 46, 5, p. 619-626.e2

  Research output: Contribution to journal › Article › peer-review

  • Dental Pulp Cavity
  • Tooth
  • Pain
  • Therapeutics
  • Temporomandibular Joint Disorders
  1 Scopus citations

• 4,5-, 3,6-, and 3,4,5,6-tert-Butylsulfanylphthalonitriles: Synthesis and comparative structural and spectroscopic analyses

  Kumru, U., Dumoulin, F., Jeanneau, E., Yuksel, F., Cabezas, Y., Zorlu, Y. & Ahsen, V., Feb 1 2012, In: Structural Chemistry. 23, 1, p. 175-183 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Nuclear magnetic resonance spectroscopy
  • Melting point
  • melting points
  • polarity
  • X rays
  16 Scopus citations