Find Research Outputs

2018

A Comparison of Matrix Smoothing Algorithms

Kracht, J. & Waller, N. G. Jan 2 2018 In : Multivariate Behavioral Research. 53, 1, p. 136-137 2 p.

Research output: Contribution to journalComment/debate

Smoothing Algorithm

A comparison of radiologists' and urologists' opinions regarding prostate MRI reporting: Results from a survey of specialty societies

Spilseth, B., Ghai, S., Patel, N. U., Taneja, S. S., Margolis, D. J. & Rosenkrantz, A. B. Jan 1 2018 In : American Journal of Roentgenology. 210, 1, p. 101-107 7 p.

Research output: Contribution to journalArticle

Prostate
Information Systems
Urologists
Surveys and Questionnaires
Radiologists
rural school
secondary school
town
Food
school
1 Citations
Apolipoprotein B-100
Apolipoproteins B
Immunoassay
Coronary Disease
Atherosclerosis

A conceptual geochemical model of the geothermal system at Surprise Valley, CA

Fowler, A. P. G., Ferguson, C., Cantwell, C. A., Zierenberg, R. A., McClain, J., Spycher, N. & Dobson, P. Jan 1 2018 (Accepted/In press) In : Journal of Volcanology and Geothermal Research.

Research output: Contribution to journalArticle

geothermal system
valleys
valley
Hot springs
Fluids

A constitutive model description of the in vivo material properties of lower birth canal tissue during the first stage of labor

Tracy, P. V., Wineman, A. S., Orejuela, F. J., Ramin, S. M., DeLancey, J. O. L. & Ashton-Miller, J. A. Mar 1 2018 In : Journal of the Mechanical Behavior of Biomedical Materials. 79, p. 213-218 6 p.

Research output: Contribution to journalArticle

Viscoelasticity
Canals
Constitutive models
Muscle
Materials properties

A constrained slice-dependent background suppression scheme for simultaneous multislice pseudo-continuous arterial spin labeling

Shao, X., Wang, Y., Moeller, S. & Wang, D. J. J. Jan 1 2018 In : Magnetic resonance in medicine. 79, 1, p. 394-400 7 p.

Research output: Contribution to journalArticle

Signal-To-Noise Ratio
Perfusion Imaging
Brain
Neuroimaging

A Continuous a-Stratification Index for Item Exposure Control in Computerized Adaptive Testing

Huebner, A., Wang, C., Daly, B. & Pinkelman, C. Mar 1 2018 (Accepted/In press) In : Applied Psychological Measurement.

Research output: Contribution to journalArticle

social stratum
bank
discrimination
simulation
ability
1 Citations

A critical role for donor-derived IL-22 in cutaneous chronic GVHD

Gartlan, K. H. , Bommiasamy, H. , Paz, K. , Wilkinson, A. N. , Owen, M. , Reichenbach, D. K. , Banovic, T. , Wehner, K. , Buchanan, F. , Varelias, A. , Kuns, R. D. , Chang, K. , Fedoriw, Y. , Shea, T. , Coghill, J. , Zaiken, M. , Plank, M. W. , Foster, P. S. , Clouston, A. D. , Blazar, B. R. & 2 others Serody, J. S. & Hill, G. R. Apr 1 2018 In : American Journal of Transplantation. 18, 4, p. 810-820 11 p.

Research output: Contribution to journalArticle

Graft vs Host Disease
Tissue Donors
Skin
Interleukin-17
Stem Cell Transplantation
1 Citations

Acrolein exposure in hookah smokers and non-smokers exposed to hookah tobacco secondhand smoke: Implications for regulating hookah tobacco products

Kassem, N. O. F., Kassem, N. O., Liles, S., Zarth, A. T., Jackson, S. R., Daffa, R. M., Chatfield, D. A., Carmella, S. G., Hecht, S. S. & Hovell, M. F. Mar 6 2018 In : Nicotine and Tobacco Research. 20, 4, p. 492-501 10 p.

Research output: Contribution to journalArticle

Acrolein
Tobacco Smoke Pollution
Tobacco Products
Tobacco
Smoking
Uterine Cervical Neoplasms
Organizations
Vaccination
Language
Delivery of Health Care

Acrylamide Formation in Processed Potatoes as Affected by Cultivar, Nitrogen Fertilization and Storage Time

Sun, N., Rosen, C. J. & Thompson, A. L. Mar 23 2018 (Accepted/In press) In : American Journal of Potato Research. p. 1-14 14 p.

Research output: Contribution to journalArticle

Acrylamide
acrylamides
Solanum tuberosum
Fertilization
storage time

Activated Polyacrylamides as Versatile Substrates for Postpolymerization Modification

Larsen, M. B., Herzog, S. E., Quilter, H. C. & Hillmyer, M. A. Jan 16 2018 In : ACS Macro Letters. 7, 1, p. 122-126 5 p.

Research output: Contribution to journalArticle

Acrylamide
Free radical polymerization
Polyacrylates
Amines
Substrates

Activated renal tubular Wnt/β-catenin signaling triggers renal inflammation during overload proteinuria

Wong, D. W. L., Yiu, W. H., Chan, K. W., Li, Y., Li, B., Lok, S. W. Y., Taketo, M. M., Igarashi, P., Chan, L. Y. Y., Leung, J. C. K., Lai, K. N. & Tang, S. C. W. Jan 1 2018 (Accepted/In press) In : Kidney international.

Research output: Contribution to journalArticle

beta Catenin
Proteinuria
Inflammation
Kidney
Blood Urea Nitrogen

Activating transcription factor 6α deficiency exacerbates oligodendrocyte death and myelin damage in immune-mediated demyelinating diseases

Stone, S., Wu, S., Jamison, S., Durose, W., Pallais, J. P. & Lin, W. Jan 1 2018 (Accepted/In press) In : GLIA.

Research output: Contribution to journalArticle

Activating Transcription Factors
Oligodendroglia
Demyelinating Diseases
Myelin Sheath
Autoimmune Experimental Encephalomyelitis
2 Citations

Activation of p53 in Immature Myeloid Precursor Cells Controls Differentiation into Ly6c+CD103+ Monocytic Antigen-Presenting Cells in Tumors

Sharma, M. D., Rodriguez, P. C., Koehn, B. H., Baban, B., Cui, Y., Guo, G., Shimoda, M., Pacholczyk, R., Shi, H., Lee, E. J., Xu, H., Johnson, T. S., He, Y., Mergoub, T., Venable, C., Bronte, V., Wolchok, J. D., Blazar, B. R. & Munn, D. H. Jan 16 2018 In : Immunity. 48, 1, p. 91-106.e6

Research output: Contribution to journalArticle

Antigen-Presenting Cells
Myeloid Cells
Immunotherapy
Cell Differentiation
Cross-Priming

Activation of the unfolded protein response downregulates cardiac ion channels in human induced pluripotent stem cell-derived cardiomyocytes

Liu, M., Shi, G., Zhou, A., Rupert, C. E., Coulombe, K. L. K. & Dudley, S. C. Apr 1 2018 In : Journal of Molecular and Cellular Cardiology. 117, p. 62-71 10 p.

Research output: Contribution to journalArticle

Unfolded Protein Response
Induced Pluripotent Stem Cells
Ion Channels
Cardiac Myocytes
Down-Regulation

Active convolutional neural networks for cancerous tissue recognition

Stanitsas, P., Cherian, A., Truskinovsky, A., Morellas, V. & Papanikolopoulos, N. Feb 20 2018 2017 IEEE International Conference on Image Processing, ICIP 2017 - Proceedings. IEEE Computer Society, Vol. 2017-September, p. 1367-1371 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tissue
Neural networks
Image analysis
Entropy
Deep neural networks

Active Space Dependence in Multiconfiguration Pair-Density Functional Theory

Sharma, P., Truhlar, D. G. & Gagliardi, L. Feb 13 2018 In : Journal of Chemical Theory and Computation. 14, 2, p. 660-669 10 p.

Research output: Contribution to journalArticle

Density functional theory
density functional theory
Carrier concentration
functionals
Molecules
1 Citations

Actuation of Thin Nematic Elastomer Sheets with Controlled Heterogeneity

Plucinsky, P., Lemm, M. & Bhattacharya, K. Jan 1 2018 In : Archive For Rational Mechanics And Analysis. 227, 1, p. 149-214 66 p.

Research output: Contribution to journalArticle

Elastomers
Metric
Variational Formulation
Energy
Minimizer

Acute Graft-versus-Host Disease

Zeiser, R. & Blazar, B. R. Feb 8 2018 In : The New England journal of medicine. 378, 6, 1 p.

Research output: Contribution to journalLetter

Graft vs Host Disease

Acute Kidney Injury and Sepsis

Skube, S. J., Katz, S. A., Chipman, J. G. & Tignanelli, C. J. Feb 1 2018 In : Surgical Infections. 19, 2, p. 216-224 9 p.

Research output: Contribution to journalArticle

Acute Kidney Injury
Sepsis
Practice Guidelines
Critical Care
Resuscitation

Acute onset autonomic dysfunction and orthostatic syncope as an early manifestation of HIV infection

Kohno, R., Koene, R., Sarcia, P. & Benditt, D. G. Feb 1 2018 In : Clinical Autonomic Research. 28, 1, p. 127-129 3 p.

Research output: Contribution to journalLetter

Syncope
HIV Infections
1 Citations

Acute pyelonephritis in adults

Johnson, J. R. & Russo, T. A. Jan 4 2018 In : New England Journal of Medicine. 378, 1, p. 48-59 12 p.

Research output: Contribution to journalArticle

Severity of Illness Index
Drug Administration Schedule
Drug Administration Routes
Flank Pain
Dysuria

Adam Kilgarriff’s legacy to computational linguistics and beyond

Evans, R., Gelbukh, A., Grefenstette, G., Hanks, P., Jakubíček, M., McCarthy, D., Palmer, M., Pedersen, T., Rundell, M., Rychlý, P., Sharoff, S. & Tugwell, D. Jan 1 2018 Computational Linguistics and Intelligent Text Processing - 17th International Conference, CICLing 2016, Revised Selected Papers. Springer- Verlag, p. 3-25 23 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9623 LNCS)

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Computational linguistics
Computational Linguistics
Linguistics
Continue
Data storage equipment

Adapting to large-scale changes in Advanced Placement Biology, Chemistry, and Physics: the impact of online teacher communities

Frumin, K., Dede, C., Fischer, C., Foster, B., Lawrenz, F., Eisenkraft, A., Fishman, B., Jurist Levy, A. & McCoy, A. Jan 18 2018 (Accepted/In press) In : International Journal of Science Education. p. 1-24 24 p.

Research output: Contribution to journalArticle

physics
biology
chemistry
teacher
community

Adaptive Directional Lifting Wavelet Transform VLSI Architecture

Yun, S., Sobelman, G. E. & Zhou, X. Apr 12 2018 (Accepted/In press) In : Journal of Signal Processing Systems. p. 1-9 9 p.

Research output: Contribution to journalArticle

VLSI Architecture
Wavelet transforms
Wavelet Transform
Throughput
Lifting Scheme

Adaptive LASSO for linear mixed model selection via profile log-likelihood

Pan, J. & Shang, J. Apr 18 2018 In : Communications in Statistics - Theory and Methods. 47, 8, p. 1882-1900 19 p.

Research output: Contribution to journalArticle

Adaptive Lasso
Linear Mixed Model
Random Effects
Model Selection
Likelihood

Adaptive SNP-Set Association Testing in Generalized Linear Mixed Models with Application to Family Studies

Park, J. Y., Wu, C., Basu, S., McGue, M. & Pan, W. Jan 1 2018 In : Behavior genetics. 48, 1, p. 55-66 12 p.

Research output: Contribution to journalArticle

family studies
Single Nucleotide Polymorphism
Linear Models
Genome-Wide Association Study
testing

A data-driven distributionally robust bound on the expected optimal value of uncertain mixed 0-1 linear programming

Xu, G. & Burer, S. Jan 1 2018 In : Computational Management Science. 15, 1, p. 111-134 24 p.

Research output: Contribution to journalArticle

Linear programming
Semidefinite programming
Guarantee
Nature
Joint distribution

Addition of yucca extract and glutamine in the diet of chicks had a protective effect against coccidiosis

Galli, G. M., Da Silva, A. S., Bottari, N. B., Biazus, A. H., Petrolli, T., Reis, J. H., Morsch, V. M., Schetinger, M. R. C., Piva, M. M., Baggio, R. A., Mendes, R. E., Boiago, M. M., Stefani, L. M. & Machado, G. Jan 1 2018 In : Comparative Clinical Pathology. 27, 1, p. 205-214 10 p.

Research output: Contribution to journalArticle

Yucca
Coccidiosis
Glutamine
Oocysts
Diet

A D-enantiomer of the antimicrobial peptide GL13K evades antimicrobial resistance in the Gram positive bacteria Enterococcus faecalis and Streptococcus gordonii

Hirt, H., Hall, J. W., Larson, E. & Gorr, S. U. Mar 1 2018 In : PLoS ONE. 13, 3, e0194900

Research output: Contribution to journalArticle

Streptococcus gordonii
Enantiomers
Enterococcus faecalis
antimicrobial peptides
enantiomers

Adenylyl cyclase 5 deficiency reduces renal cyclic AMP and cyst growth in an orthologous mouse model of polycystic kidney disease

Wang, Q., Cobo-Stark, P., Patel, V., Somlo, S., Han, P. L. & Igarashi, P. Feb 1 2018 In : Kidney international. 93, 2, p. 375-389 15 p.

Research output: Contribution to journalArticle

Polycystic Kidney Diseases
Cyclic AMP
Cysts
Kidney
Growth

A detailed cell-free transcription-translation-based assay to decipher CRISPR protospacer-adjacent motifs

Maxwell, C. S., Jacobsen, T., Marshall, R., Noireaux, V. & Beisel, C. L. Jan 1 2018 (Accepted/In press) In : Methods.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
Thermionic emission
CRISPR-Cas Systems
Libraries
Guide RNA
2 Citations

A Detailed Observational Analysis of V1324 Sco, the Most Gamma-Ray-luminous Classical Nova to Date

Finzell, T. , Chomiuk, L. , Metzger, B. D. , Walter, F. M. , Linford, J. D. , Mukai, K. , Nelson, T. , Weston, J. H. S. , Zheng, Y. , Sokoloski, J. L. , Mioduszewski, A. , Rupen, M. P. , Dong, S. , Starrfield, S. , Cheung, C. C. , Woodward, C. E. , Taylor, G. B. , Bohlsen, T. , Buil, C. , Prieto, J. & 14 others Wagner, R. M., Bensby, T., Bond, I. A., Sumi, T., Bennett, D. P., Abe, F., Koshimoto, N., Suzuki, D., Tristram, P. J., Christie, G. W., Natusch, T., McCormick, J., Yee, J. & Gould, A. Jan 10 2018 In : Astrophysical Journal. 852, 2, 108

Research output: Contribution to journalArticle

ejecta
novae
gamma rays
radio
shock

Adherence to Oral Medications During Maintenance Therapy Among Children and Adolescents With Acute Lymphoblastic Leukemia: A Medication Refill Analysis

Wu, Y. P., Stenehjem, D. D., Linder, L. A., Yu, B., Parsons, B. G., Mooney, R. & Fluchel, M. N. Mar 1 2018 In : Journal of Pediatric Oncology Nursing. 35, 2, p. 86-93 8 p.

Research output: Contribution to journalArticle

Precursor Cell Lymphoblastic Leukemia-Lymphoma
Medication Adherence
Pediatrics
6-Mercaptopurine
Therapeutics

Adipokines, Inflammation, and Adiposity in Hematopoietic Cell Transplantation Survivors

Ketterl, T. G., Chow, E. J., Leisenring, W. M., Goodman, P., Koves, I. H., Petryk, A., Steinberger, J. & Baker, K. S. Jan 1 2018 (Accepted/In press) In : Biology of Blood and Marrow Transplantation.

Research output: Contribution to journalArticle

Sarcopenia
Adipokines
Cell Transplantation
Adiposity
Survivors

Adjusting Packet Size to Mitigate TCP Incast in Data Center Networks with COTS Switches

Huang, J., Huang, Y., Wang, J. & He, T. Feb 28 2018 (Accepted/In press) In : IEEE Transactions on Cloud Computing.

Research output: Contribution to journalArticle

Transmission control protocol
Internet protocols
Packet networks
Switches
Network protocols
1 Citations

A DNA methylation biomarker of alcohol consumption

Liu, C. , Marioni, R. E. , Hedman, K. K. , Pfeiffer, L. , Tsai, P. C. , Reynolds, L. M. , Just, A. C. , Duan, Q. , Boer, C. G. , Tanaka, T. , Elks, C. E. , Aslibekyan, S. , Brody, J. A. , Kühnel, B. , Herder, C. , Almli, L. M. , Zhi, D. , Wang, Y. , Huan, T. , Yao, C. & 53 others Mendelson, M. M., Joehanes, R., Liang, L., Love, S. A., Guan, W., Shah, S., McRae, A. F., Kretschmer, A., Prokisch, H., Strauch, K., Peters, A., Visscher, P. M., Wray, N. R., Guo, X., Wiggins, K. L., Smith, A. K., Binder, E. B., Ressler, K. J., Irvin, M. R., Absher, D. M., Hernandez, D., Ferrucci, L., Bandinelli, S., Lohman, K., Ding, J., Trevisi, L., Gustafsson, S., Sandling, J. H., Stolk, L., Uitterlinden, A. G., Yet, I., Castillo-Fernandez, J. E., Spector, T. D., Schwartz, J. D., Vokonas, P., Lind, L., Li, Y., Fornage, M., Arnett, D. K., Wareham, N. J., Sotoodehnia, N., Ong, K. K., van Meurs, J. B. J., Conneely, K. N., Baccarelli, A. A., Deary, I. J., Bell, J. T., North, K. E., Liu, Y., Waldenberger, M., London, S. J., Ingelsson, E. & Levy, D. Feb 1 2018 In : Molecular psychiatry. 23, 2, p. 422-433 12 p.

Research output: Contribution to journalArticle

DNA Methylation
Alcohol Drinking
Biomarkers
Alcohols
Methylation

Adolescent neurocognitive development and impacts of substance use: Overview of the adolescent brain cognitive development (ABCD) baseline neurocognition battery

Luciana, M., Bjork, J. M., Nagel, B. J., Barch, D. M., Gonzalez, R., Nixon, S. J. & Banich, M. T. Jan 1 2018 (Accepted/In press) In : Developmental Cognitive Neuroscience.

Research output: Contribution to journalArticle

Adolescent Development
Brain
Risk-Taking
Nutrition
Dyes
adolescent
gender
social attraction

Adropin: An endocrine link between the biological clock and cholesterol homeostasis

Ghoshal, S. , Stevens, J. R. , Billon, C. , Girardet, C. , Sitaula, S. , Leon, A. S. , Rao, D. C. , Skinner, J. S. , Rankinen, T. , Bouchard, C. , Nuñez, M. V. , Stanhope, K. L. , Howatt, D. A. , Daugherty, A. , Zhang, J. , Schuelke, M. , Weiss, E. P. , Coffey, A. R. , Bennett, B. J. , Sethupathy, P. & 3 others Burris, T. P., Havel, P. J. & Butler, A. A. Jan 1 2018 (Accepted/In press) In : Molecular Metabolism.

Research output: Contribution to journalArticle

Biological Clocks
Homeostasis
Cardiovascular Diseases
Obesity
Cholesterol

A Dual-Active-Bridge-Based Single-Phase AC to DC Power Electronic Transformer with Advanced Features

Baranwal, R., Castelino, G. F., Iyer, K., Basu, K. & Mohan, N. Jan 1 2018 In : IEEE Transactions on Power Electronics. 33, 1, p. 313-331 19 p., 7855801

Research output: Contribution to journalArticle

Power electronics
Plug-in hybrid vehicles
High frequency transformers
Power converters
Switches

A duality-based optimization approach for model adaptivity in heterogeneous multiscale problems

Maier, M. & Rannache, R. Jan 1 2018 In : Multiscale Modeling and Simulation. 16, 1, p. 412-428 17 p.

Research output: Contribution to journalArticle

Multiscale Problems
Adaptivity
Duality
optimization
Optimization

Adult plant leaf rust resistance derived from the soft red winter wheat cultivar ‘caldwell’ maps to chromosome 3BS

Kolmer, J. A., Chao, S., Brown-Guedira, G., Bansal, U. & Bariana, H. Jan 1 2018 In : Crop Science. 58, 1, p. 152-158 7 p.

Research output: Contribution to journalArticle

soft red winter wheat
leaf rust
mature plants
chromosomes
inbred lines

Adult plant leaf rust resistance derived from toropi wheat is conditioned by Lr78 and three minor QTL

Kolmer, J. A., Bernardo, A., Bai, G., Hayden, M. J. & Chao, S. Feb 1 2018 In : Phytopathology. 108, 2, p. 246-253 8 p.

Research output: Contribution to journalArticle

Plant Leaves
Quantitative Trait Loci
Triticum
Chromosomes
Genes

Advanced ERCP techniques for the extraction of complex biliary stones: a single referral center’s 12-year experience

Brown, N. G., Camilo, J., Nordstrom, E., Yen, R. D., Fukami, N., Brauer, B. C., Wani, S., Amateau, S. K., Attwell, A. R. & Shah, R. J. Apr 9 2018 (Accepted/In press) In : Scandinavian journal of gastroenterology. p. 1-6 6 p.

Research output: Contribution to journalArticle

Endoscopic Retrograde Cholangiopancreatography
Referral and Consultation
Dilatation
Laser Lithotripsy
Lithotripsy

Advances in drainage: Selected works from the Tenth international drainage symposium

Strock, J. S., Hay, C. H., Helmers, M. J., Nelson, K. A., Sands, G. R., Skaggs, R. W. & Douglas-Mankin, K. R. Jan 1 2018 In : Transactions of the ASABE. 61, 1, p. 161-168 8 p.

Research output: Contribution to journalArticle

Water Quality
Drainage
Water quality
drainage
water quantity

Advances in Polymer Design for Enhancing Oral Drug Solubility and Delivery

Ting, J. M., Porter, W. W., Mecca, J. M., Bates, F. S. & Reineke, T. M. Apr 18 2018 In : Bioconjugate Chemistry. 29, 4, p. 939-952 14 p.

Research output: Contribution to journalReview article

Slip forming
Reheat cycle
Dispersions
Solubility
Drug products

Advancing Canadian Urological Association guidelines using GRADE

Dahm, P., Lewis, J. & Sultan, S. Apr 1 2018 In : Canadian Urological Association Journal. 12, 4, p. 93-94 2 p.

Research output: Contribution to journalShort survey

Guidelines