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  • James R Johnson
2011

Antimicrobial use and risk for recurrent clostridium difficile infection

Drekonja, D. M., Amundson, W. H., Decarolis, D. D., Kuskowski, M. A., Lederle, F. A. & Johnson, J. R., Nov 1 2011, In : American Journal of Medicine. 124, 11

Research output: Contribution to journalArticle

43 Scopus citations

Clonal identity of Escherichia coli as a predictive factor for recurrent cystitis

Sokurenko, E. & Johnson, J. R., Jan 1 2011, In : Virulence. 2, 6, p. 495-497 3 p.

Research output: Contribution to journalEditorial

Commonality among fluoroquinolone-resistant sequence type ST131 extraintestinal Escherichia coli isolates from humans and companion animals in Australia

Platell, J. L., Cobbold, R. N., Johnson, J. R., Heisig, A., Heisig, P., Clabots, C., Kuskowski, M. A. & Trott, D. J., Aug 1 2011, In : Antimicrobial agents and chemotherapy. 55, 8, p. 3782-3787 6 p.

Research output: Contribution to journalArticle

82 Scopus citations

Community transmission in the United States of a CTX-M-15-producing sequence type ST131 Escherichia coli strain resulting in death

Owens, R. C., Johnson, J. R., Stogsdill, P., Yarmus, L., Lolans, K. & Quinn, J., Sep 1 2011, In : Journal of clinical microbiology. 49, 9, p. 3406-3408 3 p.

Research output: Contribution to journalArticle

41 Scopus citations

Diagnosis and treatment of acute pyelonephritis in women

Colgan, R., Williams, M. & Johnson, J. R., Sep 1 2011, In : American Family Physician. 84, 5, p. 519-526 8 p.

Research output: Contribution to journalArticle

32 Scopus citations

Do not abandon cultures

Johnson, J. R., Jun 27 2011, In : Archives of Internal Medicine. 171, 12, 1 p.

Research output: Contribution to journalLetter

Extended-spectrum β-lactamase- producing escherichia coli in neonatal care unit

Johnson, J. R., Jun 1 2011, In : Emerging infectious diseases. 17, 6, p. 1153-1154 2 p.

Research output: Contribution to journalLetter

1 Scopus citations

Fimbrial profiles predict virulence of uropathogenic Escherichia coli Strains: Contribution of Ygi and Yad fimbriae

Spurbeck, R. R., Stapleton, A. E., Johnson, J. R., Walk, S. T., Hooton, T. M. & Mobley, H. L. T., Dec 1 2011, In : Infection and immunity. 79, 12, p. 4753-4763 11 p.

Research output: Contribution to journalArticle

79 Scopus citations

Global distribution and epidemiologic associations of escherichia coli clonal group A, 1998-2007

Johnson, J. R., Menard, M. E., Lauderdale, T. L., Kosmidis, C., Gordon, D., Collignon, P., Maslow, J. N., Andrǎević, A. T. & Kuskowski, M. A., Nov 2011, In : Emerging infectious diseases. 17, 11, p. 2001-2009 9 p.

Research output: Contribution to journalArticle

31 Scopus citations

Hydrocortisone and treatment of multiple trauma [3]

Johnson, J. R., Jul 6 2011, In : JAMA - Journal of the American Medical Association. 306, 1, 1 p.

Research output: Contribution to journalLetter

1 Scopus citations

Molecular epidemiology of Escherichia coli bacteremia in liver transplant recipients

Bert, F., Huynh, B., Dondero, F., Johnson, J. R., Paugam-Burtz, C., Durand, F., Belghiti, J., Valla, D., Moreau, R. & Nicolas-Chanoine, M. H., Aug 1 2011, In : Transplant Infectious Disease. 13, 4, p. 359-365 7 p.

Research output: Contribution to journalArticle

8 Scopus citations

Multidrug-resistant extraintestinal pathogenic Escherichia coli of sequence type ST131 in animals and foods

Platell, J. L., Johnson, J. R., Cobbold, R. N. & Trott, D. J., Nov 21 2011, In : Veterinary Microbiology. 153, 1-2, p. 99-108 10 p.

Research output: Contribution to journalReview article

65 Scopus citations

Presence of putative repeat-in-toxin gene tosA in escherichia coli predicts successful colonization of the urinary tract

Vigil, P. D., Stapleton, A. E., Johnson, J. R., Hooton, T. M., Hodges, A. P., He, Y. & Mobley, H. L. T., Jan 1 2011, In : mBio. 2, 3

Research output: Contribution to journalArticle

28 Scopus citations

Rates of mutation and host transmission for an escherichia coli clone over 3 years

Reeves, P. R., Liu, B., Zhou, Z., Li, D., Guo, D., Ren, Y., Clabots, C., Lan, R., Johnson, J. R. & Wang, L., Nov 2 2011, In : PloS one. 6, 10, e26907.

Research output: Contribution to journalArticle

64 Scopus citations

Re: Uropathogenic escherichia coli induces chronic pelvic pain

Rudick, C. N., Berry, R. E., Johnson, J. R., Johnston, B., Klumpp, D. J., Schaeffer, A. J. & Thumbikat, P., Nov 1 2011, In : Journal of Urology. 186, 5, 1 p.

Research output: Contribution to journalComment/debate

Reduction of inappropriate urinary catheter use at a veterans affairs hospital through a multifaceted quality improvement project

Knoll, B. M., Wright, D., Ellingson, L., Kraemer, L., Patire, R., Kuskowski, M. A. & Johnson, J. R., Jun 1 2011, In : Clinical Infectious Diseases. 52, 11, p. 1283-1290 8 p.

Research output: Contribution to journalReview article

59 Scopus citations

Rifampin and methicillin-resistant staphylococcus aureus bone and joint infections

Johnson, J. R., Jul 1 2011, In : Clinical Infectious Diseases. 53, 1, p. 98-99 2 p.

Research output: Contribution to journalLetter

2 Scopus citations

Systematic review of the literature on comparative effectiveness of antiviral treatments for chronic hepatitis B infection

Shamliyan, T. A., Johnson, J. R., MacDonald, R., Shaukat, A., Yuan, J. M., Kane, R. L. & Wilt, T. J., Mar 1 2011, In : Journal of general internal medicine. 26, 3, p. 326-339 14 p.

Research output: Contribution to journalArticle

11 Scopus citations

Tigecycline treatment for urinary tract infections: Case report and literature review

Drekonja, D. M. & Johnson, J. R., Jun 2011, In : Journal of Chemotherapy. 23, 3, p. 168-170 3 p.

Research output: Contribution to journalArticle

6 Scopus citations

Uropathogenic Escherichia coli induces chronic pelvic pain

Rudick, C. N., Berry, R. E., Johnson, J. R., Johnston, B., Klumpp, D. J., Schaeffer, A. J. & Thumbikat, P., Feb 1 2011, In : Infection and immunity. 79, 2, p. 628-635 8 p.

Research output: Contribution to journalArticle

49 Scopus citations
2012

Associations between multidrug resistance, plasmid content, and virulence potential among extraintestinal pathogenic and commensal Escherichia coli from humans and poultry

Johnson, T. J., Logue, C. M., Johnson, J. R., Kuskowski, M. A., Sherwood, J. S., Barnes, H. J., Debroy, C., Wannemuehler, Y. M., Obata-Yasuoka, M., Spanjaard, L. & Nolan, L. K., Jan 1 2012, In : Foodborne pathogens and disease. 9, 1, p. 37-46 10 p.

Research output: Contribution to journalArticle

65 Scopus citations

Community-associated Escherichia coli harboring CTX-M β-lactamases from urine cultures from pediatric patients

Woods, K. L., Johnson, J. R., Padkowsky, S., Mariano, N., Colon-Urban, R., Hassanein, M., Wehbeh, W., Johnston, B. D., Clabots, C., Zahid, S. & Urban, C., Apr 1 2012, In : Antimicrobial agents and chemotherapy. 56, 4, p. 2209-2210 2 p.

Research output: Contribution to journalLetter

5 Scopus citations

Comparison of Escherichia coli ST131 pulsotypes, by epidemiologic traits, 1967-2009

Johnson, J. R., Nicolas-Chanoine, M. H., Deb Roy, C., Castanheira, M., Robicsek, A., Hansen, G., Weissman, S., Urban, C., Platell, J., Trott, D., Zhanel, G., Clabots, C., Johnston, B. D. & Kuskowski, M. A., Apr 1 2012, In : Emerging infectious diseases. 18, 4, p. 598-607 10 p.

Research output: Contribution to journalArticle

79 Scopus citations

Complications of Foley catheters - Is infection the greatest risk?

Leuck, A-M., Wright, D., Ellingson, L., Kraemer, L., Kuskowski, M. A. & Johnson, J. R., May 1 2012, In : Journal of Urology. 187, 5, p. 1662-1666 5 p.

Research output: Contribution to journalArticle

74 Scopus citations

Enteroaggregative Escherichia coli O78:H10, the cause of an outbreak of urinary tract infection

Olesen, B., Scheutz, F., Andersen, R. L., Menard, M., Boisen, N., Johnston, B., Hansen, D. S., Krogfelt, K. A., Nataro, J. P. & Johnson, J. R., Nov 1 2012, In : Journal of clinical microbiology. 50, 11, p. 3703-3711 9 p.

Research output: Contribution to journalArticle

40 Scopus citations

Escherichia coli isolates that carry vat, fyua, chua, and yfcv efficiently colonize the urinary tract

Spurbeck, R. R., Dinh, P. C., Walk, S. T., Stapleton, A. E., Hooton, T. M., Nolan, L. K., Kim, K. S., Johnson, J. R. & Mobley, H. L. T., Dec 14 2012, In : Infection and immunity. 80, 12, p. 4115-4122 8 p.

Research output: Contribution to journalArticle

63 Scopus citations

Fluoroquinolone-resistant extraintestinal Escherichia coli clinical isolates representing the O15: K52: H1 clonal group from humans and dogs in Australia

Platell, J. L., Cobbold, R. N., Johnson, J. R., Clabots, C. R. & Trott, D. J., Jul 1 2012, In : Comparative Immunology, Microbiology and Infectious Diseases. 35, 4, p. 319-324 6 p.

Research output: Contribution to journalArticle

5 Scopus citations

Food-borne origins of escherichia coli causing extraintestinal infections

Griffin, P. M., Manges, A. R. & Johnson, J. R., Sep 1 2012, In : Clinical Infectious Diseases. 55, 5, p. 712-719 8 p.

Research output: Contribution to journalArticle

145 Scopus citations

Fostering high-value, cost-conscious care[3]

Johnson, J. R., Jun 19 2012, In : Annals of internal medicine. 156, 12, p. 902-903 2 p.

Research output: Contribution to journalLetter

High-resolution two-locus clonal typing of extraintestinal pathogenic Escherichia coli

Weissman, S. J., Johnson, J. R., Tchesnokova, V., Billig, M., Dykhuizen, D., Riddell, K., Rogers, P., Qin, X., Butler-Wu, S., Cookson, B. T., Fang, F. C., Scholes, D., Chattopadhyay, S. & Sokurenko, E., Mar 1 2012, In : Applied and environmental microbiology. 78, 5, p. 1353-1360 8 p.

Research output: Contribution to journalArticle

114 Scopus citations

Identification of CTX-M β-lactamases among Escherichia coli from the community in New York City

Tiruvury, H., Johnson, J. R., Mariano, N., Grenner, L., Colon-Urban, R., Erritouni, M., Wehbeh, W., Segal-Maurer, S., Rahal, J. J., Johnston, B. & Urban, C., Mar 1 2012, In : Diagnostic Microbiology and Infectious Disease. 72, 3, p. 248-252 5 p.

Research output: Contribution to journalArticle

12 Scopus citations
23 Scopus citations

Molecular epidemiological analysis of Escherichia coli sequence type ST131 (O25:H4) and bla CTX-M-15among extended-spectrum-β- lactamase-producing E. coli from the United States, 2000 to 2009

Johnson, J. R., Urban, C., Weissman, S. J., Jorgensen, J. H., Lewis, J. S., Hansen, G., Edelstein, P. H., Robicsek, A., Cleary, T., Adachi, J., Paterson, D., Quinn, J., Hanson, N. D., Johnston, B. D., Clabots, C., Kuskowski, M. A., Bergsbaken, R. L., Hooton, T. M., Hulse, M., Lolans, K. & 3 others, Owens, R., Palavecino, E. & Vigil, K., May 1 2012, In : Antimicrobial agents and chemotherapy. 56, 5, p. 2364-2370 7 p.

Research output: Contribution to journalArticle

83 Scopus citations

Multiplex PCR-based reverse line blot assay for simultaneous detection of 22 virulence genes in uropathogenic Escherichia coli

Kudinha, T., Kong, F., Johnson, J. R., Andrew, S. D., Anderson, P. & Gilbert, G. L., Feb 1 2012, In : Applied and environmental microbiology. 78, 4, p. 1198-1202 5 p.

Research output: Contribution to journalArticle

27 Scopus citations

Post-prostate biopsy infection with Escherichia coli ST131 leading to epididymo-orchitis and meningitis caused by gram-negative bacilli

Assimacopoulos, A., Johnston, B., Clabots, C. & Johnson, J. R., Dec 1 2012, In : Journal of clinical microbiology. 50, 12, p. 4157-4159 3 p.

Research output: Contribution to journalArticle

14 Scopus citations

Prevalence of avian-pathogenic escherichia coli strain O1 Genomic islands among extraintestinal and commensal E. Coli isolates

Johnson, T. J., Wannemuehler, Y., Kariyawasam, S., Johnson, J. R., Logue, C. M. & Nolan, L. K., Jun 1 2012, In : Journal of bacteriology. 194, 11, p. 2846-2853 8 p.

Research output: Contribution to journalArticle

20 Scopus citations

Prominence of an O75 clonal group (clonal complex 14) among non-st131 fluoroquinolone-resistant Escherichia coli causing extraintestinal infections in humans and dogs in Australia

Platell, J. L., Trott, D. J., Johnson, J. R., Heisig, P., Heisig, A., Clabots, C. R., Johnston, B. & Cobbold, R. N., Jul 1 2012, In : Antimicrobial agents and chemotherapy. 56, 7, p. 3898-3904 7 p.

Research output: Contribution to journalArticle

31 Scopus citations

Purple urine bag syndrome

Johnson, J. R., May 9 2012, In : JAMA - Journal of the American Medical Association. 307, 18, 1 p.

Research output: Contribution to journalLetter

2 Scopus citations

RE: Local antibiograms can reduce inappropriate antibiotic prescribing

Colgan, R., Williams, M. & Johnson, J. R., May 15 2012, In : American Family Physician. 85, 10, p. 948-950 3 p.

Research output: Contribution to journalLetter

Rifapentine and isoniazid for latent tuberculosis [1]

Johnson, J. R., Apr 12 2012, In : New England Journal of Medicine. 366, 15, p. 1447-1448 2 p.

Research output: Contribution to journalLetter

1 Scopus citations

Rifapentine and isoniazid for latent tuberculosis [2]

Johnson, J. R., Apr 12 2012, In : New England Journal of Medicine. 366, 15, p. 1447-1448 2 p.

Research output: Contribution to journalLetter

2 Scopus citations
16 Scopus citations

Urinary Tract Infections

Drekonja, D. M. & Johnson, J. R., Jan 1 2012, Netter's Infectious Disease. Elsevier Inc., p. 221-226 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

74 Scopus citations
2013

Abrupt emergence of a single dominant multidrug-resistant strain of Escherichia coli

Johnson, J. R., Tchesnokova, V., Johnston, B., Clabots, C., Roberts, P. L., Billig, M., Riddell, K., Rogers, P., Qin, X., Butler-Wu, S., Price, L. B., Aziz, M., Nicolas-Chanoine, M. H., Debroy, C., Robicsek, A., Hansen, G., Urban, C., Platell, J., Trott, D. J., Zhanel, G. & 8 others, Weissman, S. J., Cookson, B. T., Fang, F. C., Limaye, A. P., Scholes, D., Chattopadhyay, S., Hooper, D. C. & Sokurenko, E. V., Feb 28 2013, In : Journal of Infectious Diseases. 207, 6, p. 919-928 10 p.

Research output: Contribution to journalArticle

170 Scopus citations

A survey of resident physicians' knowledge regarding urine testing and subsequent antimicrobial treatment

Drekonja, D. M., Abbo, L. M., Kuskowski, M. A., Gnadt, C., Shukla, B. & Johnson, J. R., Oct 1 2013, In : American journal of infection control. 41, 10, p. 892-896 5 p.

Research output: Contribution to journalArticle

23 Scopus citations

Clinical and molecular correlates of virulence in Escherichia coli causing bloodstream infection following transrectal ultrasound-guided (TRUS) prostate biopsy

Williamson, D. A., Freeman, J. T., Porter, S., Roberts, S., Wiles, S., Paterson, D. L. & Johnson, J. R., Dec 1 2013, In : Journal of Antimicrobial Chemotherapy. 68, 12, p. 2898-2906 9 p., dkt276.

Research output: Contribution to journalArticle

18 Scopus citations

Complete genome sequence of the epidemic and highly virulent CTX-M-15-producing H30-Rx subclone of Escherichia coli ST131

Andersen, P. S., Stegger, M., Aziz, M., Contente-Cuomo, T., Gibbons, H. S., Keim, P., Sokurenko, E. V., Johnson, J. R. & Price, L. B., Jan 1 2013, In : Genome Announcements. 1, 6, e00988-13.

Research output: Contribution to journalArticle

31 Scopus citations

Distribution of phylogenetic groups, sequence type ST131, and virulence-associated traits among Escherichia coli isolates from men with pyelonephritis or cystitis and healthy controls

Kudinha, T., Johnson, J. R., Andrew, S. D., Kong, F., Anderson, P. & Gilbert, G. L., Apr 2013, In : Clinical Microbiology and Infection. 19, 4, p. E173-E180

Research output: Contribution to journalArticle

32 Scopus citations

Escherichia coli sequence type 131 (ST131) subclone h30 as an emergent multidrug-resistant pathogen among US Veterans

Colpan, A., Johnston, B., Porter, S., Clabots, C., Anway, R., Thao, L., Kuskowski, M. A., Tchesnokova, V., Sokurenko, E. V., Johnson, J. R., Allen, B. L., Baracco, G. J., Bedimo, R., Bessesen, M., Bonomo, R. A., Brecher, S. M., Brown, S. T., Castellino, L., Desai, A. S., Fernau, F. & 11 others, Fisher, M. A., Fleckenstein, J., Fleming, C. S., Fries, N. J., Kan, V. L., Kauffman, C. A., Klutts, S., Ohl, M., Russo, T., Swiatlo, A. & Swiatlo, E., Nov 1 2013, In : Clinical Infectious Diseases. 57, 9, p. 1256-1265 10 p.

Research output: Contribution to journalArticle

116 Scopus citations