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Personal profile

Research interests

  • Bioinformatics
  • Mass Spectrometry
  • Proteomics
  • Metabolomics
  • Systems Biology
  • Multi-Omics
  • Cancer
  • Biochemistry

Fingerprint The Fingerprint is created by mining the titles and abstracts of the person's research outputs and projects/funding awards to create an index of weighted terms from discipline-specific thesauri.

  • 15 Similar Profiles
Proteomics Medicine & Life Sciences
Mass spectrometry Chemical Compounds
Proteins Chemical Compounds
Mass Spectrometry Medicine & Life Sciences
Peptides Chemical Compounds
Proteome Chemical Compounds
Galaxies Medicine & Life Sciences
Workflow Medicine & Life Sciences

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Projects 2007 2024

Dog Diseases
Addison Disease
Autoantibodies

Research Output 1997 2019

Challenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring Hits

Hubler, S. L., Kumar, P., Mehta, S., Easterly, C., Johnson, J. E., Jagtap, P. D. & Griffin, T. J., Jan 1 2019, (Accepted/In press) In : Journal of Proteome Research.

Research output: Contribution to journalArticle

Peptides
Workflow
Databases
Proteomics
Liquid chromatography
2 Citations (Scopus)

Distinct cancer-promoting stromal gene expression depending on lung function

Sandri, B. J., Masvidal, L., Murie, C., Bartish, M., Avdulov, S., Higgins, L. A., Markowski, T., Peterson, M., Bergh, J., Yang, P., Rolny, C., Limper, A. H., Griffin, T. J., Bitterman, P. B., Wendt, C. H. & Larsson, O., Aug 1 2019, In : American journal of respiratory and critical care medicine. 200, 3, p. 348-358 11 p.

Research output: Contribution to journalArticle

Gene Expression
Lung
Lung Neoplasms
Neoplasms
Sirolimus
1 Citation (Scopus)

MetaQuantome: An integrated, quantitative metaproteomics approach reveals connections between taxonomy and protein function in complex microbiomes

Easterly, C. W., Sajulga, R., Mehta, S., Johnson, J., Kumar, P., Hubler, S., Mesuere, B., Rudney, J., Griffin, T. J. & Jagtap, P. D., Jan 1 2019, In : Molecular and Cellular Proteomics. 18, 8, p. S82-S91

Research output: Contribution to journalArticle

Open Access
Microbiota
Taxonomies
Benchmarking
Proteins
Galaxies

QuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and Informatics

Kumar, P., Panigrahi, P., Johnson, J. E., Weber, W. J., Mehta, S., Sajulga, R., Easterly, C., Crooker, B. A., Heydarian, M., Anamika, K., Griffin, T. J. & Jagtap, P. D., Feb 1 2019, In : Journal of Proteome Research. 18, 2, p. 782-790 9 p.

Research output: Contribution to journalArticle

Informatics
Galaxies
Software
Proteins
Visualization