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Timothy J Griffin

 https://orcid.org/0000-0001-6801-2559
19972020

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Personal profile

Research interests

  • Bioinformatics
  • Mass Spectrometry
  • Proteomics
  • Metabolomics
  • Systems Biology
  • Multi-Omics
  • Cancer
  • Biochemistry

Fingerprint The Fingerprint is created by mining the titles and abstracts of the person's research outputs and projects/funding awards to create an index of weighted terms from discipline-specific thesauri.

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Projects

Cancer Center Support Grant

Yee, D., AbuSalah, A. M., Basu, S., Beckman, K. B., Bielinsky, A. K., Cooley, S. A., De For, T. E., Falconer, S. N., Felices, M., Griffin, T. J., Hallstrom, T. C., Hatsukami, D. K., Hendrickson, E. A., Hirsch, B. A., Joseph, A. M., Kirstein, M. N., Konety, B. R., Koopmeiners, J., Kuntz, K. M., Lange, C. A., Largaespada, D. A., Le, C. T., LeBeau, A., Lindgren, B. R., Luo, X., Mc Carthy, J. B., McKenna, D. H., Miller, J. S., Moriarity, B. S., Nelson, H. H., O'Sullivan, G., Ondrey, F. G., Pennell, C. A., Petersen, A. J., Peterson, B. A., Peterson, L. A., Sarver, A. L., Shimizu, Y., Siegfried, J. M., Temiz, N. A., Turesky, R., Vogel, R., Wagner, J. E., Wang, J., Weigel, B. J., Weisdorf, D. J., Woo, J. & Yamamoto, M.

NIH NATIONAL CANCER INSTITUTE (NCI)

2/1/19 → 1/31/24

Project: Research project

The microbiota of the pediatric CF airway: what role does it play?

Hunter, R. C., Griffin, T. J. & Wendt, C. H.

ANN & ROBERT H LURIE CHILDREN'S HOSPITAL

5/1/18 → 4/30/22

Project: Research project

    • Identifying the Disease-Defining Autoantibodies in Canine Addison's Disease

    Friedenberg, S. G., Griffin, T. J. & Jagtap, P. D.

    American Kennel Club

    3/1/18 → 8/31/21

    Project: Research project

    • A Galaxy-based multi-omic informatics hub for cancer res

    Griffin, T. J., Hegeman, A. D., Jagtap, P. D., Johnson, J. E., Lynch, B. J. & Wennblom, T.

    NIH NATIONAL CANCER INSTITUTE (NCI)

    5/18/16 → 4/30/21

    Project: Research project

    • The Role of Truncated mRNAs in Cancer

    Yong, J., Griffin, T. J. & Kuang, R.

    NIH NIGMS NATL INST OF GENERAL

    9/17/15 → 8/31/20

    Project: Research project

    • Research Output

    A Sectioning and Database Enrichment Approach for Improved Peptide Spectrum Matching in Large, Genome-Guided Protein Sequence Databases

    Kumar, P., Johnson, J. E., Easterly, C., Mehta, S., Sajulga, R., Nunn, B., Jagtap, P. D. & Griffin, T. J., Jul 2 2020, In : Journal of Proteome Research. 19, 7, p. 2772-2785 14 p.

    Research output: Contribution to journal › Article

    • Challenges in Peptide-Spectrum Matching: A Robust and Reproducible Statistical Framework for Removing Low-Accuracy, High-Scoring Hits

    Hubler, S. L., Kumar, P., Mehta, S., Easterly, C., Johnson, J. E., Jagtap, P. D. & Griffin, T. J., Jan 3 2020, In : Journal of Proteome Research. 19, 1, p. 161-173 13 p.

    Research output: Contribution to journal › Article

    • Multi-omics Visualization Platform: An extensible Galaxy plug-in for multi-omics data visualization and exploration

    Mcgowan, T., Johnson, J. E., Kumar, P., Sajulga, R., Mehta, S., Jagtap, P. D. & Griffin, T. J., Apr 6 2020, In : GigaScience. 9, 4, giaa025.

    Research output: Contribution to journal › Article

    Open Access

    • The Cancer Microbiome: Distinguishing Direct and Indirect Effects Requires a Systemic View

    Xavier, J. B., Young, V. B., Skufca, J., Ginty, F., Testerman, T., Pearson, A. T., Macklin, P., Mitchell, A., Shmulevich, I., Xie, L., Caporaso, J. G., Crandall, K. A., Simone, N. L., Godoy-Vitorino, F., Griffin, T. J., Whiteson, K. L., Gustafson, H. H., Slade, D. J., Schmidt, T. M., Walther-Antonio, M. R. S. & 10 others, Korem, T., Webb-Robertson, B. J. M., Styczynski, M. P., Johnson, W. E., Jobin, C., Ridlon, J. M., Koh, A. Y., Yu, M., Kelly, L. & Wargo, J. A., Mar 2020, In : Trends in Cancer. 6, 3, p. 192-204 13 p.

    Research output: Contribution to journal › Review article

    Open Access
    • 3 Scopus citations

    Distinct cancer-promoting stromal gene expression depending on lung function

    Sandri, B. J., Masvidal, L., Murie, C., Bartish, M., Avdulov, S., Higgins, L. A., Markowski, T., Peterson, M., Bergh, J., Yang, P., Rolny, C., Limper, A. H., Griffin, T. J., Bitterman, P. B., Wendt, C. H. & Larsson, O., Aug 1 2019, In : American journal of respiratory and critical care medicine. 200, 3, p. 348-358 11 p.

    Research output: Contribution to journal › Article

    • 4 Scopus citations