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Research Output

2020

A perspective and framework for developing sample type specific databases for LC/MS-based clinical metabolomics

Reisdorph, N. A., Walmsley, S. & Reisdorph, R., Jan 2020, In : Metabolites. 10, 1, 8.

Research output: Contribution to journalArticle

Open Access
2019

Methods and Challenges for Computational Data Analysis for DNA Adductomics

Walmsley, S. J., Guo, J., Wang, J., Villalta, P. W. & Turesky, R. J., Nov 18 2019, In : Chemical research in toxicology. 32, 11, p. 2156-2168 13 p.

Research output: Contribution to journalReview article

Truncated rank correlation (TRC) as a robust measure of test-retest reliability in mass spectrometry data

Lim, J., Yu, D., Kuo, H. C., Choi, H. & Walmsley, S., Jan 1 2019, In : Statistical Applications in Genetics and Molecular Biology. 18, 4, 20180056.

Research output: Contribution to journalArticle

2018

Data Descriptor: A prototypic small molecule database for bronchoalveolar lavage-based metabolomics

Walmsley, S., Cruickshank-Quinn, C., Quinn, K., Zhang, X., Petrache, I., Bowler, R. P., Reisdorph, R. & Reisdorph, N., Apr 17 2018, In : Scientific Data. 5, 180060.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations
2017

Customized Consensus Spectral Library Building for Untargeted Quantitative Metabolomics Analysis with Data Independent Acquisition Mass Spectrometry and MetaboDIA Workflow

Chen, G., Walmsley, S., Cheung, G. C. M., Chen, L., Cheng, C. Y., Beuerman, R. W., Wong, T. Y., Zhou, L. & Choi, H., May 2 2017, In : Analytical chemistry. 89, 9, p. 4897-4906 10 p.

Research output: Contribution to journalArticle

Open Access
17 Scopus citations

Performance of a High-Pressure Liquid Chromatography-Ion Mobility-Mass Spectrometry System for Metabolic Profiling

Zhang, X., Kew, K., Reisdorph, R., Sartain, M., Powell, R., Armstrong, M., Quinn, K., Cruickshank-Quinn, C., Walmsley, S., Bokatzian, S., Darland, E., Rain, M., Imatani, K. & Reisdorph, N., Jun 20 2017, In : Analytical chemistry. 89, 12, p. 6384-6391 8 p.

Research output: Contribution to journalArticle

19 Scopus citations
2013

Comprehensive analysis of protein digestion using six trypsins reveals the origin of trypsin as a significant source of variability in proteomics

Walmsley, S. J., Rudnick, P. A., Liang, Y., Dong, Q., Stein, S. E. & Nesvizhskii, A. I., Dec 6 2013, In : Journal of Proteome Research. 12, 12, p. 5666-5680 15 p.

Research output: Contribution to journalArticle

40 Scopus citations

LuciPHOr: Algorithm for phosphorylation site localization with false localization rate estimation using modified target-decoy approach

Fermin, D., Walmsley, S. J., Gingras, A. C., Choi, H. & Nesvizhskii, A. I., Nov 1 2013, In : Molecular and Cellular Proteomics. 12, 11, p. 3409-3419 11 p.

Research output: Contribution to journalArticle

Open Access
43 Scopus citations
2012
11 Scopus citations
2010

Proteomic analysis of brush-border membrane vesicles isolated from purified proximal convoluted tubules

Walmsley, S. J., Broeckling, C., Hess, A., Prenni, J. & Curthoys, N. P., Jun 1 2010, In : American Journal of Physiology - Renal Physiology. 298, 6, p. F1323-F1331

Research output: Contribution to journalArticle

20 Scopus citations
2007

Identification of serum biomarkers for canine B-cell lymphoma by use of surface-enhanced laser desorption-ionization time-of-flight mass spectrometry

Gaines, P. J., Powell, T. D., Walmsley, S. J., Estredge, K. L., Wisnewski, N., Stinchcomb, D. T., Withrow, S. J. & Lana, S. E., Apr 1 2007, In : American journal of veterinary research. 68, 4, p. 405-410 6 p.

Research output: Contribution to journalArticle

18 Scopus citations
2004
3 Scopus citations
2003

Cloning and characterization of five cDNAs encoding peritrophin-A domains from the cat flea, Ctenocephalides felis

Gaines, P. J., Walmsley, S. J. & Wisnewski, N., Nov 2003, In : Insect Biochemistry and Molecular Biology. 33, 11, p. 1061-1073 13 p.

Research output: Contribution to journalArticle

36 Scopus citations