Pratik D Jagtap

Research Assistant Professor

19982020
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Projects 2012 2020

Dog Diseases
Addison Disease
Autoantibodies
Galaxies
Informatics
Research Personnel
Neoplasms

Mechanisms of Anticancer Agents Selective against Drug R

Xing, C., Burke, M., Jagtap, P. D., Remmel, R. P., Thomas, D. D., Zhou, X. & Anderson, L.

NIH NATIONAL CANCER INSTITUTE (NCI)

9/17/126/30/16

Project: Research project

Antineoplastic Agents
Leukemia
Pharmaceutical Preparations
Galaxies
Informatics
Proteomics

Research Output 1998 2019

metaQuantome: An Integrated, Quantitative Metaproteomics Approach Reveals Connections Between Taxonomy and Protein Function in Complex Microbiomes

Easterly, C. W., Sajulga, R., Mehta, S., Johnson, J. E., Kumar, P., Hubler, S., Mesuere, B., Rudney, J. D., Griffin, T. J. & Jagtap, P. D., Aug 9 2019, In : Molecular & cellular proteomics : MCP. 18, 8, p. S82-S91

Research output: Contribution to journalArticle

Open Access
Microbiota
Taxonomies
Benchmarking
Proteins
Galaxies
2 Citations (Scopus)

Progress and Challenges in Ocean Metaproteomics and Proposed Best Practices for Data Sharing

Saito, M. A., Bertrand, E. M., Duffy, M. E., Gaylord, D. A., Held, N. A., Hervey, W. J., Hettich, R. L., Jagtap, P. D., Janech, M. G., Kinkade, D. B., Leary, D. H., McIlvin, M. R., Moore, E. K., Morris, R. M., Neely, B. A., Nunn, B. L., Saunders, J. K., Shepherd, A. I., Symmonds, N. I. & Walsh, D. A., Apr 5 2019, In : Journal of Proteome Research. 18, 4, p. 1461-1476 16 p.

Research output: Contribution to journalReview article

Information Dissemination
Practice Guidelines
Oceans and Seas
Carbon
Aquatic ecosystems

QuanTP: A Software Resource for Quantitative Proteo-Transcriptomic Comparative Data Analysis and Informatics

Kumar, P., Panigrahi, P., Johnson, J. E., Weber, W. J., Mehta, S., Sajulga, R., Easterly, C., Crooker, B. A., Heydarian, M., Anamika, K., Griffin, T. J. & Jagtap, P. D., Feb 1 2019, In : Journal of Proteome Research. 18, 2, p. 782-790 9 p.

Research output: Contribution to journalArticle

Informatics
Galaxies
Software
Proteins
Visualization

The galaxy platform for reproducible affinity proteomic mass spectrometry data analysis

Stewart, P. A., Kuenzi, B. M., Mehta, S., Kumar, P., Johnson, J. E., Jagtap, P. D., Griffin, T. J. & Haura, E. B., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 249-261 13 p. (Methods in Molecular Biology; vol. 1977).

Research output: Chapter in Book/Report/Conference proceedingChapter

Galaxies
Proteomics
Mass Spectrometry
Workflow
Software
1 Citation (Scopus)

Update on the moFF Algorithm for Label-Free Quantitative Proteomics

Argentini, A., Staes, A., Grüning, B., Mehta, S., Easterly, C., Griffin, T. J., Jagtap, P. D., Impens, F. & Martens, L., Feb 1 2019, In : Journal of Proteome Research. 18, 2, p. 728-731 4 p.

Research output: Contribution to journalArticle

Proteomics
Labels
Search Engine
Peptides
Workflow