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Research Output 2001 2019

5 Citations (Scopus)

A molecular and morphological analysis of the genus Rhizopogon subgenus Villosuli section Villosuli as a preface to ecological monitoring

Bubriski, R. & Kennedy, P. G., Jan 1 2014, In : Mycologia. 106, 2, p. 353-361 9 p.

Research output: Contribution to journalArticle

Rhizopogon
Spores
spores
monitoring
spore
26 Citations (Scopus)

A molecular and phylogenetic analysis of the structure and specificity of Alnus rubra ectomycorrhizal assemblages

Kennedy, P. G. & Hill, L. T., Aug 1 2010, In : Fungal Ecology. 3, 3, p. 195-204 10 p.

Research output: Contribution to journalArticle

Alnus rubra
Alnus
Tomentella
phylogenetics
Alpova
24 Citations (Scopus)

Arbutus menziesii (Ericaceae) facilitates regeneration dynamics in mixed evergreen forests by promoting mycorrhizal fungal diversity and host connectivity

Kennedy, P. G., Smith, D. P., Horton, T. R. & Molina, R. J., Oct 1 2012, In : American journal of botany. 99, 10, p. 1691-1701 11 p.

Research output: Contribution to journalArticle

Arbutus menziesii
Ericaceae
evergreen forest
mixed forest
connectivity
222 Citations (Scopus)

A strong species-area relationship for eukaryotic soil microbes: Island size matters for ectomycorrhizal fungi

Peay, K. G., Bruns, T. D., Kennedy, P. G., Bergemann, S. E. & Garbelotto, M., Jun 1 2007, In : Ecology letters. 10, 6, p. 470-480 11 p.

Research output: Contribution to journalArticle

species-area relationship
soil microorganisms
species richness
fungus
species diversity
95 Citations (Scopus)

Biogeography of ectomycorrhizal fungi associated with alders (Alnus spp.) in relation to biotic and abiotic variables at the global scale

Põlme, S., Bahram, M., Yamanaka, T., Nara, K., Dai, Y. C., Grebenc, T., Kraigher, H., Toivonen, M., Wang, P. H., Matsuda, Y., Naadel, T., Kennedy, P. G., Kõljalg, U. & Tedersoo, L., Jun 1 2013, In : New Phytologist. 198, 4, p. 1239-1249 11 p.

Research output: Contribution to journalArticle

Alnus
Fungi
biogeography
fungi
phylogeny
3 Citations (Scopus)

Colonization by nitrogen-fixing Frankia bacteria causes short-term increases in herbivore susceptibility in red alder (Alnus rubra) seedlings

Ballhorn, D. J., Elias, J. D., Balkan, M. A., Fordyce, R. F. & Kennedy, P. G., Jun 1 2017, In : Oecologia. 184, 2, p. 497-506 10 p.

Research output: Contribution to journalArticle

Alnus rubra
Frankia
herbivore
herbivores
colonization
28 Citations (Scopus)

Colonization-competition tradeoffs as a mechanism driving successional dynamics in ectomycorrhizal fungal communities

Kennedy, P. G., Higgins, L. M., Rogers, R. H. & Weber, M. G., Sep 19 2011, In : PLoS One. 6, 9, e25126.

Research output: Contribution to journalArticle

Meristem
fungal communities
Spores
root tips
Pinus muricata
14 Citations (Scopus)

Competitive avoidance not edaphic specialization drives vertical niche partitioning among sister species of ectomycorrhizal fungi

Mujic, A. B., Durall, D. M., Spatafora, J. W. & Kennedy, P. G., Feb 1 2016, In : New Phytologist. 209, 3, p. 1174-1183 10 p.

Research output: Contribution to journalArticle

niches
Fungi
Soil
Rhizopogon
fungi
55 Citations (Scopus)

Competitive interactions among three ectomycorrhizal fungi and their relation to host plant performance

Kennedy, P. G., Hortal, S., Bergemann, S. E. & Bruns, T. D., Nov 1 2007, In : Journal of Ecology. 95, 6, p. 1338-1345 8 p.

Research output: Contribution to journalArticle

host plant
host plants
fungus
fungi
biomass
50 Citations (Scopus)

Determining the outcome of field-based competition between two Rhizopogon species using real-time PCR

Kennedy, P. G., Bergemann, S. E., Hortal, S. & Bruns, T. D., Feb 1 2007, In : Molecular ecology. 16, 4, p. 881-890 10 p.

Research output: Contribution to journalArticle

Rhizopogon
Seedlings
polymerase chain reaction
Real-Time Polymerase Chain Reaction
quantitative polymerase chain reaction
47 Citations (Scopus)

Different soil moisture conditions change the outcome of the ectomycorrhizal symbiosis between Rhizopogon species and Pinus muricata

Kennedy, P. G. & Peay, K. G., Feb 1 2007, In : Plant and Soil. 291, 1-2, p. 155-165 11 p.

Research output: Contribution to journalArticle

Pinus muricata
Rhizopogon
symbiosis
soil moisture
soil water
124 Citations (Scopus)

Dimensions of biodiversity in the Earth mycobiome

Peay, K. G., Kennedy, P. G. & Talbot, J. M., Jun 14 2016, In : Nature Reviews Microbiology. 14, 7, p. 434-447 14 p.

Research output: Contribution to journalReview article

Biodiversity
Animal Structures
Plant Structures
DNA Sequence Analysis
Ecosystem
6 Citations (Scopus)

Ecological and functional effects of fungal endophytes on wood decomposition

Cline, L. C., Schilling, J. S., Menke, J., Groenhof, E. & Kennedy, P. G., Jan 1 2018, In : Functional Ecology. 32, 1, p. 181-191 11 p.

Research output: Contribution to journalArticle

decayed wood
endophyte
endophytes
decomposition
deterioration
6 Citations (Scopus)

Ecological responses to forest age, habitat, and host vary by mycorrhizal type in boreal peatlands

Kennedy, P. G., Mielke, L. A. & Nguyen, N. H., Apr 1 2018, In : Mycorrhiza. 28, 3, p. 315-328 14 p.

Research output: Contribution to journalArticle

Ledum
peatlands
peatland
Larix
Ecosystem
28 Citations (Scopus)

Ectomycorrhizal fungal diversity and saprotrophic fungal diversity are linked to different tree community attributes in a field-based tree experiment

Nguyen, N. H., Williams, L. J., Vincent, J. B., Stefanski, A., Cavender-Bares, J., Messier, C., Paquette, A., Gravel, D., Reich, P. B. & Kennedy, P. G., Aug 1 2016, In : Molecular Ecology. 25, 16, p. 4032-4046 15 p.

Research output: Contribution to journalArticle

species diversity
phylogenetics
fungal communities
gymnosperm
experiment
8 Citations (Scopus)

Ectomycorrhizal fungal protein degradation ability predicted by soil organic nitrogen availability

Rineau, F., Stas, J., Nguyen, N. H., Kuyper, T. W., Carleer, R., Vangronsveld, J., Colpaert, J. V. & Kennedy, P. G., Jan 1 2016, In : Applied and environmental microbiology. 82, 5, p. 1391-1400 10 p.

Research output: Contribution to journalArticle

fungal proteins
Fungal Proteins
organic nitrogen
protein degradation
Proteolysis
24 Citations (Scopus)

Ectomycorrhizal fungal response to warming is linked to poor host performance at the boreal-temperate ecotone

Fernandez, C. W., Nguyen, N. H., Stefanski, A., Han, Y., Hobbie, S. E., Montgomery, R. A., Reich, P. B. & Kennedy, P. G., Apr 1 2017, In : Global change biology. 23, 4, p. 1598-1609 12 p.

Research output: Contribution to journalArticle

ecotone
Fungi
warming
Climate change
Soils
99 Citations (Scopus)
Fungal Structures
fungal communities
interspecific competition
community structure
Fungi
51 Citations (Scopus)

Ectomycorrhizal fungi in Mexican Alnus forests support the host co-migration hypothesis and continental-scale patterns in phylogeography

Kennedy, P. G., Garibay-Orijel, R., Higgins, L. M. & Angeles-Arguiz, R., Aug 1 2011, In : Mycorrhiza. 21, 6, p. 559-568 10 p.

Research output: Contribution to journalArticle

Alnus
Phylogeography
phylogeography
Fungi
fungus
3 Citations (Scopus)

Ectomycorrhizal host specificity in a changing world: can legacy effects explain anomalous current associations?

Lofgren, L., Nguyen, N. H. & Kennedy, P. G., Dec 1 2018, In : New Phytologist. 220, 4, p. 1273-1284 12 p.

Research output: Contribution to journalArticle

Pinaceae
Host Specificity
host specificity
Quercus
Fungi
12 Citations (Scopus)

Effort versus reward Preparing samples for fungal community characterization in high-throughput sequencing surveys of soils

Song, Z., Schlatter, D., Kennedy, P., Kinkel, L. L., Kistler, H. C., Nguyen, N. & Bates, S. T., May 14 2015, In : PloS one. 10, 5, e0127234.

Research output: Contribution to journalArticle

fungal communities
soil surveys
Reward
Ecosystem
Soil
30 Citations (Scopus)
facilitation
Pseudotsuga
sapling
grasslands
grassland
7 Citations (Scopus)

Frankia and Alnus rubra canopy roots: An assessment of genetic diversity, propagule availability, and effects on soil nitrogen

Kennedy, P. G., Schouboe, J. L., Rogers, R. H., Weber, M. G. & Nadkarni, N. M., Jan 1 2010, In : Microbial Ecology. 59, 2, p. 214-220 7 p.

Research output: Contribution to journalArticle

Alnus rubra
Frankia
propagule
soil nitrogen
forest floor
4 Citations (Scopus)
Alnus viridis
Alnus rubra
Frankia
genotype
bioassay
10 Citations (Scopus)

Frankia bacteria in Alnus rubra forests: Genetic diversity and determinants of assemblage structure

Kennedy, P. G., Weber, M. G. & Bluhm, A. A., Jun 7 2010, In : Plant and Soil. 335, 1, p. 479-492 14 p.

Research output: Contribution to journalArticle

forest genetics
Alnus rubra
Frankia
genotype
genetic variation
180 Citations (Scopus)

Fungal community ecology: A hybrid beast with a molecular master

Peay, K. G., Kennedy, P. G. & Bruns, T. D., Oct 1 2008, In : BioScience. 58, 9, p. 799-810 12 p.

Research output: Contribution to journalReview article

community ecology
fungal communities
Ecology
Fungi
fungi
26 Citations (Scopus)

Fungal endophytes as priority colonizers initiating wood decomposition

Song, Z., Kennedy, P. G., Liew, F. J. & Schilling, J. S., Feb 1 2017, In : Functional Ecology. 31, 2, p. 407-418 12 p.

Research output: Contribution to journalArticle

decayed wood
endophyte
endophytes
brown-rot fungi
decomposition
402 Citations (Scopus)

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

Nguyen, N. H., Song, Z., Bates, S. T., Branco, S., Tedersoo, L., Menke, J., Schilling, J. S. & Kennedy, P. G., Apr 1 2016, In : Fungal Ecology. 20, p. 241-248 8 p.

Research output: Contribution to journalArticle

fungal communities
guild
grassland soils
fungus
forest soils
2 Citations (Scopus)

Genome-based estimates of fungal rDNA copy number variation across phylogenetic scales and ecological lifestyles

Lofgren, L. A., Uehling, J. K., Branco, S., Bruns, T. D., Martin, F. & Kennedy, P. G., Feb 1 2019, In : Molecular ecology. 28, 4, p. 721-730 10 p.

Research output: Contribution to journalArticle

Fungal DNA
DNA Copy Number Variations
Ribosomal DNA
lifestyle
ribosomal DNA
3 Citations (Scopus)

Global patterns in fine root decomposition: climate, chemistry, mycorrhizal association and woodiness

See, C. R., Luke McCormack, M., Hobbie, S. E., Flores-Moreno, H., Silver, W. L. & Kennedy, P. G., Jun 2019, In : Ecology letters. 22, 6, p. 946-953 8 p.

Research output: Contribution to journalLetter

fine root
chemistry
decomposition
climate
degradation
15 Citations (Scopus)

Host preference and network properties in biotrophic plant–fungal associations

Põlme, S., Bahram, M., Jacquemyn, H., Kennedy, P., Kohout, P., Moora, M., Oja, J., Öpik, M., Pecoraro, L. & Tedersoo, L., Feb 1 2018, In : New Phytologist. 217, 3, p. 1230-1239 10 p.

Research output: Contribution to journalArticle

host preferences
fungal communities
nestedness
Fungi
phylogeny
7 Citations (Scopus)

Individuals, populations, communities and function: The growing field of ectomycorrhizal ecology

Bruns, T. D. & Kennedy, P. G., Apr 1 2009, In : New Phytologist. 182, 1, p. 12-14 3 p.

Research output: Contribution to journalComment/debate

Research Peer Review
Mycorrhizae
ectomycorrhizae
Population Dynamics
Ecology
4 Citations (Scopus)

Melanin mitigates the accelerated decay of mycorrhizal necromass with peatland warming

Fernandez, C. W., Heckman, K., Kolka, R. & Kennedy, P. G., Mar 1 2019, In : Ecology letters. 22, 3, p. 498-505 8 p.

Research output: Contribution to journalLetter

melanin
peatlands
peatland
warming
deterioration
13 Citations (Scopus)

Melanization of mycorrhizal fungal necromass structures microbial decomposer communities

Fernandez, C. W. & Kennedy, P. G., Mar 1 2018, In : Journal of Ecology. 106, 2, p. 468-479 12 p.

Research output: Contribution to journalArticle

melanization
microbial communities
microbial community
fungus
melanin
10 Citations (Scopus)

Missing checkerboards? An absence of competitive signal in Alnus-associated ectomycorrhizal fungal communities

Kennedy, P. G., Nguyen, N. H., Cohen, H. & Peay, K., Jan 1 2014, In : PeerJ. 2014, 12, e686.

Research output: Contribution to journalArticle

Alnus
fungal communities
Fungi
interspecific competition
DNA sequences
8 Citations (Scopus)

Moving beyond de novo clustering in fungal community ecology

Cline, L. C., Song, Z., Al-Ghalith, G. A., Knights, D. & Kennedy, P. G., Nov 1 2017, In : The New phytologist. 216, 3, p. 629-634 6 p.

Research output: Contribution to journalLetter

Open Access
Soil Microbiology
soil biology
High-Throughput Nucleotide Sequencing
Plant Leaves
community ecology
22 Citations (Scopus)

Moving beyond the black-box: Fungal traits, community structure, and carbon sequestration in forest soils

Fernandez, C. W. & Kennedy, P. G., Mar 1 2015, In : New Phytologist. 205, 4, p. 1378-1380 3 p.

Research output: Contribution to journalComment/debate

Carbon Sequestration
Mycorrhizae
Carbon Cycle
taiga
mycorrhizae
1 Citation (Scopus)

Mycorrhizas take root at the Ecological Society of America

Kennedy, P. & Bruns, T., Dec 1 2007, In : New Phytologist. 176, 4, p. 745-748 4 p.

Research output: Contribution to journalArticle

Mycorrhizae
Biological Models
Plant Roots
interspecific interaction
mycorrhiza
30 Citations (Scopus)
Alnus
Betula
generalist
bioassay
fungus
14 Citations (Scopus)

Nickel hyperaccumulation as an anti-herbivore trait: Considering the role of tolerance to damage

Palomino, M., Kennedy, P. G. & Simms, E. L., Apr 1 2007, In : Plant and Soil. 293, 1-2, p. 189-195 7 p.

Research output: Contribution to journalArticle

hyperaccumulation
nickel
herbivore
herbivores
tolerance
Open Access
Biodiversity
Fungi
Soil
fungus
biodiversity
3 Citations (Scopus)

Organic nitrogen addition suppresses fungal richness and alters community composition in temperate forest soils

Cline, L. C., Huggins, J. A., Hobbie, S. E. & Kennedy, P. G., Oct 1 2018, In : Soil Biology and Biochemistry. 125, p. 222-230 9 p.

Research output: Contribution to journalArticle

temperate soils
organic nitrogen
temperate forests
temperate forest
forest soils
142 Citations (Scopus)

Parsing ecological signal from noise in next generation amplicon sequencing

Nguyen, N. H., Smith, D., Peay, K. & Kennedy, P. G., Mar 1 2015, In : New Phytologist. 205, 4, p. 1389-1393 5 p.

Research output: Contribution to journalLetter

Ecological and Environmental Phenomena
DNA Contamination
High-Throughput Nucleotide Sequencing
Signal-To-Noise Ratio
Ecology
12 Citations (Scopus)

Phylogenetic assessment of global Suillus ITS sequences supports morphologically defined species and reveals synonymous and undescribed taxa

Nguyen, N. H., Vellinga, E. C., Bruns, T. D. & Kennedy, P. G., Nov 1 2016, In : Mycologia. 108, 6, p. 1216-1228 13 p.

Research output: Contribution to journalArticle

Suillus
North America
internal transcribed spacers
Names
Northern Asia
3 Citations (Scopus)

Plant-mediated partner discrimination in ectomycorrhizal mutualisms

Bogar, L., Peay, K., Kornfeld, A., Huggins, J., Hortal, S., Anderson, I. & Kennedy, P. G., Mar 1 2019, In : Mycorrhiza. 29, 2, p. 97-111 15 p.

Research output: Contribution to journalArticle

fungus
Fungi
fungi
Suillus
Seedlings
137 Citations (Scopus)

Potential link between plant and fungal distributions in a dipterocarp rainforest: Community and phylogenetic structure of tropical ectomycorrhizal fungi across a plant and soil ecotone

Peay, K. G., Kennedy, P. G., Davies, S. J., Tan, S. & Bruns, T. D., Jan 1 2010, In : New Phytologist. 185, 2, p. 529-542 14 p.

Research output: Contribution to journalArticle

Plant Dispersal
Dipterocarpaceae
ecotones
rain forests
Fungi
129 Citations (Scopus)

Preserving accuracy in GenBank

Bruns, T. D., Blackwell, M., Edwards, I., Taylor, A. F. S., Horton, T., Zhang, N., Kõljalg, U., May, G., Kuyper, T. W., Bever, J. D., Gilbert, G., Taylor, J. W., DeSantis, T. Z., Pringle, A., Borneman, J., Thorn, G., Berbee, M., Mueller, G. M., Andersen, G. L., Vellinga, E. C. & 236 others, Branco, S., Anderson, I., Dickie, I. A., Avis, P., Timonen, S., Kjøller, R., Lodge, D. J., Bateman, R. M., Purvis, A., Crous, P. W., Hawkes, C., Barraclough, T., Burt, A., Nilsson, R. H., Larsson, K. H., Alexander, I., Moncalvo, J. M., Berube, J., Spatafora, J., Thorsten Lumbsch, H., Blair, J. E., Suh, S. O., Pfister, D. H., Binder, M., Boehm, E. W., Kohn, L., Mata, J. L., Dyer, P., Sung, G. H., Dentinger, B., Simmons, E. G., Baird, R. E., Volk, T. J., Perry, B. A., Kerrigan, R. W., Campbell, J., Rajesh, J., Reynolds, D. R., Geiser, D., Humber, R. A., Hausmann, N., Szaro, T., Stajich, J., Gathman, A., Peay, K. G., Henkel, T., Robinson, C. H., Pukkila, P. J., Nguyen, N. H., Villalta, C., Kennedy, P., Bergemann, S., Catherine Aime, M., Kauff, F., Porras-Alfaro, A., Gueidan, C., Beck, A., Andersen, B., Marek, S., Crouch, J. A., Kerrigan, J., Beagle Ristaino, J., Hodge, K. T., Kuldau, G., Samuels, G. J., Raja, H. A., Voglmayr, H., Gardes, M., Janos, D. P., Rogers, J. D., Cannon, P., Woolfolk, S. W., Kistler, H. C., Castellano, M. A., Maldonado-Ramírez, S. L., Kirk, P. M., Farrar, J. J., Osmundson, T., Currah, R. S., Vujanovic, V., Chen, W., Korf, R. P., Atallah, Z. K., Harrison, K. J., Guarro, J., Bates, S. T., Enrico Bonello, P., Bridge, P., Schell, W., Rossi, W., Stenlid, J., Frisvad, J. C., Miller, R. M., Baker, S. E., Hallen, H. E., Janso, J. E., Wilson, A. W., Conway, K. E., Egerton-Warburton, L., Wang, Z., Eastburn, D., Hong Ho, W. W., Kroken, S., Stadler, M., Turgeon, G., Lichtwardt, R. W., Stewart, E. L., Wedin, M., Li, D. W., Uchida, J. Y., Jumpponen, A., Deckert, R. J., Beker, H. J., Rogers, S. O., Xu, J., Johnston, P., Shoemaker, R. A., Liu, M., Marques, G., Summerell, B., Sokolski, S., Thrane, U., Widden, P., Bruhn, J. N., Bianchinotti, V., Tuthill, D., Baroni, T. J., Barron, G., Hosaka, K., Jewell, K., Piepenbring, M., Sullivan, R., Griffith, G. W., Bradley, S. G., Aoki, T., Yoder, W. T., Ju, Y. M., Berch, S. M., Trappe, M., Duan, W., Bonito, G., Taber, R. A., Coelho, G., Bills, G., Ganley, A., Agerer, R., Nagy, L., Roy, B. A., Læssøe, T., Hallenberg, N., Tichy, H. V., Stalpers, J., Langer, E., Scholler, M., Krueger, D., Pacioni, G., Pöder, R., Pennanen, T., Capelari, M., Nakasone, K., Tewari, J. P., Miller, A. N., Decock, C., Huhndorf, S., Wach, M., Vishniac, H. S., Yohalem, D. S., Smith, M. E., Glenn, A. E., Spiering, M., Lindner, D. L., Schoch, C., Redhead, S. A., Ivors, K., Jeffers, S. N., Geml, J., Okafor, F., Spiegel, F. W., Dewsbury, D., Carroll, J., Porter, T. M., Pashley, C., Carpenter, S. E., Abad, G., Voigt, K., Arenz, B., Methven, A. S., Schechter, S., Vance, P., Mahoney, D., Kang, S., Rheeder, J. P., Mehl, J., Greif, M., Ndzi Ngala, G., Ammirati, J., Kawasaki, M., Gwo-Fang, Y., Matsumoto, T., Smith, D., Koenig, G., Luoma, D., May, T., Leonardi, M., Sigler, L., Taylor, D. L., Gibson, C., Sharpton, T., Hawksworth, D. L., Carmine Dianese, J., Trudell, S. A., Paulus, B., Padamsee, M., Callac, P., Lima, N., White, M., Barreau, C., Juncai, M. A., Buyck, B., Rabeler, R. K., Liles, M. R., Estes, D., Carter, R., Herr, J. M., Chandler, G., Kerekes, J., Cruse-Sanders, J., Galán Márquez, R., Horak, E., Fitzsimons, M., Döring, H., Yao, S., Hynson, N., Ryberg, M., Arnold, A. E. & Hughes, K., Mar 21 2008, In : Science. 319, 5870, 1 p.

Research output: Contribution to journalLetter

93 Citations (Scopus)
Pinus muricata
Rhizopogon
Pinus
Meristem
Seedlings
8 Citations (Scopus)

Probing promise versus performance in longer read fungal metabarcoding

Kennedy, P. G., Cline, L. C. & Song, Z., Feb 1 2018, In : New Phytologist. 217, 3, p. 973-976 4 p.

Research output: Contribution to journalComment/debate

43 Citations (Scopus)

Propagule size and predispersal damage by insects affect establishment and early growth of mangrove seedlings

Sousa, W. P., Kennedy, P. G. & Mitchell, B. J., Jan 1 2003, In : Oecologia. 135, 4, p. 564-575 12 p.

Research output: Contribution to journalArticle

propagule
mangrove
seedling
insect
insects