1996 …2024

Research output per year

If you made any changes in Pure these will be visible here soon.

Research Output

2020

Accelerating the Evolution of Nonhuman Primate Neuroimaging

The PRIMatE Data Exchange (PRIME-DE) Global Collaboration Workshop and Consortium, Feb 19 2020, In : Neuron. 105, 4, p. 600-603 4 p.

Research output: Contribution to journalArticle

Open Access
Open Access
2019
9 Scopus citations

Automatic localization of the subthalamic nucleus on patient-specific clinical MRI by incorporating 7 T MRI and machine learning: Application in deep brain stimulation

Kim, J., Duchin, Y., Shamir, R. R., Patriat, R., Vitek, J., Harel, N. & Sapiro, G., Feb 1 2019, In : Human Brain Mapping. 40, 2, p. 679-698 20 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Microelectrode Recordings Validate the Clinical Visualization of Subthalamic-Nucleus Based on 7T Magnetic Resonance Imaging and Machine Learning for Deep Brain Stimulation Surgery

Shamir, R. R., Duchin, Y., Kim, J., Patriat, R., Marmor, O., Bergman, H., Vitek, J. L., Sapiro, G., Bick, A., Eliahou, R., Eitan, R., Israel, Z. & Harel, N., Mar 1 2019, In : Clinical Neurosurgery. 84, 3, p. 749-756 8 p.

Research output: Contribution to journalArticle

3 Scopus citations

Proceedings of the Sixth Deep Brain Stimulation Think Tank Modulation of Brain Networks and Application of Advanced Neuroimaging, Neurophysiology, and Optogenetics

Ramirez-Zamora, A., Giordano, J., Boyden, E. S., Gradinaru, V., Gunduz, A., Starr, P. A., Sheth, S. A., McIntyre, C. C., Fox, M. D., Vitek, J., Vedam-Mai, V., Akbar, U., Almeida, L., Bronte-Stewart, H. M., Mayberg, H. S., Pouratian, N., Gittis, A. H., Singer, A. C., Creed, M. C., Lazaro-Munoz, G. & 14 others, Richardson, M., Rossi, M. A., Cendejas-Zaragoza, L., D’Haese, P. F., Chiong, W., Gilron, R., Chizeck, H., Ko, A., Baker, K. B., Wagenaar, J., Harel, N., Deeb, W., Foote, K. D. & Okun, M. S., Sep 12 2019, In : Frontiers in Neuroscience. 13, 936.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations
2018

An Open Resource for Non-human Primate Imaging

Milham, M. P., Ai, L., Koo, B., Xu, T., Amiez, C., Balezeau, F., Baxter, M. G., Blezer, E. L. A., Brochier, T., Chen, A., Croxson, P. L., Damatac, C. G., Dehaene, S., Everling, S., Fair, D. A., Fleysher, L., Freiwald, W., Froudist-Walsh, S., Griffiths, T. D., Guedj, C. & 50 others, Hadj-Bouziane, F., Ben Hamed, S., Harel, N., Hiba, B., Jarraya, B., Jung, B., Kastner, S., Klink, P. C., Kwok, S. C., Laland, K. N., Leopold, D. A., Lindenfors, P., Mars, R. B., Menon, R. S., Messinger, A., Meunier, M., Mok, K., Morrison, J. H., Nacef, J., Nagy, J., Rios, M. O., Petkov, C. I., Pinsk, M., Poirier, C., Procyk, E., Rajimehr, R., Reader, S. M., Roelfsema, P. R., Rudko, D. A., Rushworth, M. F. S., Russ, B. E., Sallet, J., Schmid, M. C., Schwiedrzik, C. M., Seidlitz, J., Sein, J., Shmuel, A., Sullivan, E. L., Ungerleider, L., Thiele, A., Todorov, O. S., Tsao, D., Wang, Z., Wilson, C. R. E., Yacoub, E., Ye, F. Q., Zarco, W., Zhou, Y. D., Margulies, D. S. & Schroeder, C. E., Oct 10 2018, In : Neuron. 100, 1, p. 61-74.e2

Research output: Contribution to journalArticle

Open Access
25 Scopus citations

Brain structure and connectivity mapping for deep brain stimulation using ultrahigh field (7 T) MRI

Lenglet, C., Patriat, R., Vitek, J. L. & Harel, N., Jan 1 2018, Engineering in Medicine: Advances and Challenges. Elsevier, p. 437-461 25 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Clinical deep brain stimulation strategies for orientation-selective pathway activation

Slopsema, J. P., Peña, E., Patriat, R., Lehto, L. J., Gröhn, O., Mangia, S., Harel, N., Michaeli, S. & Johnson, M. D., Sep 5 2018, In : Journal of neural engineering. 15, 5, 056029.

Research output: Contribution to journalArticle

Open Access
7 Scopus citations

Individualized parcellation of the subthalamic nucleus in patients with Parkinson's disease with 7T MRI

Plantinga, B. R., Temel, Y., Duchin, Y., Uludağ, K., Patriat, R., Roebroeck, A., Kuijf, M., Jahanshahi, A., ter Haar Romenij, B., Vitek, J. & Harel, N., Mar 2018, In : NeuroImage. 168, p. 403-411 9 p.

Research output: Contribution to journalArticle

Open Access
25 Scopus citations
Open Access
11 Scopus citations
5 Scopus citations

Patient-specific anatomical model for deep brain stimulation based on 7 Tesla MRI

Duchin, Y., Shamir, R. R., Patriat, R., Kim, J., Vitek, J. L., Sapiro, G. & Harel, N., Aug 2018, In : PloS one. 13, 8, e0201469.

Research output: Contribution to journalArticle

Open Access
8 Scopus citations
2017

Creating and parameterizing patient-specific deep brain stimulation pathway-activation models using the hyperdirect pathway as an example

Gunalan, K., Chaturvedi, A., Howell, B., Duchin, Y., Lempka, S. F., Patriat, R., Sapiro, G., Harel, N. & McIntyre, C. C., Apr 2017, In : PloS one. 12, 4, e0176132.

Research output: Contribution to journalArticle

Open Access
28 Scopus citations
2016

Multimodal 7T imaging of thalamic nuclei for preclinical deep brain stimulation applications

Xiao, Y. Z., Zitella, L. M., Duchin, Y., Teplitzky, B. A., Kastl, D., Adriany, G., Yacoub, E., Harel, N. & Johnson, M. D., Jun 10 2016, In : Frontiers in Neuroscience. 10, JUN, 264.

Research output: Contribution to journalArticle

Open Access
7 Scopus citations
2015

Clinical deep brain stimulation region prediction using regression forests from high-field MRI

Kim, J., Duchin, Y., Sapiro, G., Vitek, J. & Harel, N., Dec 9 2015, 2015 IEEE International Conference on Image Processing, ICIP 2015 - Proceedings. IEEE Computer Society, p. 2480-2484 5 p. 7351248. (Proceedings - International Conference on Image Processing, ICIP; vol. 2015-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Clinical subthalamic nucleus prediction from high-field brain MRI

Kim, J., Duchin, Y., Sapiro, G., Vitek, J. & Harel, N., Jul 21 2015, 2015 IEEE 12th International Symposium on Biomedical Imaging, ISBI 2015. IEEE Computer Society, p. 1264-1267 4 p. 7164104. (Proceedings - International Symposium on Biomedical Imaging; vol. 2015-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

fMRI at High Magnetic Field: Spatial Resolution Limits and Applications

Yacoub, E., Ugurbil, K. & Harel, N., Feb 14 2015, Acquisition Methods, Methods and Modeling. Elsevier Inc., Vol. 1. p. 191-199 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

High-resolution fMRI

Yacoub, E., Shmuel, A. & Harel, N., Sep 16 2015, fMRI: From Nuclear Spins to Brain Functions. Springer US, p. 769-791 23 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

In vivo 7T MRI of the non-human primate brainstem

Zitella, L. M., Xiao, Y. Z., Teplitzky, B. A., Kastl, D. J., Duchin, Y., Baker, K. B., Vitek, J. L., Adriany, G., Yacoub, E., Harel, N. & Johnson, M. D., May 12 2015, In : PloS one. 10, 5, e0127049.

Research output: Contribution to journalArticle

8 Scopus citations

Q-Space Modeling in Diffusion-Weighted MRI

Aganj, I., Sapiro, G. & Harel, N., Feb 14 2015, Acquisition Methods, Methods and Modeling. Elsevier Inc., Vol. 1. p. 257-263 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Robust prediction of clinical deep brain stimulation target structures via the estimation of influential high-field MR atlases

Kim, J., Duchin, Y., Kim, H., Vitek, J. L., Harel, N. & Sapiro, G., Jan 1 2015, Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference, Proceedings. Hornegger, J., Frangi, A. F., Wells, W. M., Frangi, A. F., Navab, N., Hornegger, J., Navab, N., Wells, W. M., Wells, W. M., Frangi, A. F., Hornegger, J. & Navab, N. (eds.). Springer- Verlag, p. 587-594 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9350).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Subject-specific computational modeling of DBS in the PPTg area

Zitella, L. M., Teplitzky, B. A., Yager, P., Hudson, H. M., Brintz, K., Duchin, Y., Harel, N., Vitek, J. L., Baker, K. B. & Johnson, M. D., Jul 14 2015, In : Frontiers in Computational Neuroscience. 9, JULY, 93.

Research output: Contribution to journalArticle

5 Scopus citations
2014

Interoperable atlases of the human brain

Amunts, K., Hawrylycz, M. J., Van Essen, D. C., Van Horn, J. D., Harel, N., Poline, J. B., De Martino, F., Bjaalie, J. G., Dehaene-Lambertz, G., Dehaene, S., Valdes-Sosa, P., Thirion, B., Zilles, K., Hill, S. L., Abrams, M. B., Tass, P. A., Vanduffel, W., Evans, A. C. & Eickhoff, S. B., Oct 1 2014, In : NeuroImage. 99, p. 525-532 8 p.

Research output: Contribution to journalComment/debate

47 Scopus citations

Rich club analysis of structural brain connectivity at 7 tesla versus 3 tesla

Dennis, E. L., Zhan, L., Jahanshad, N., Mueller, B. A., Jin, Y., Lenglet, C., Yacoub, E., Sapiro, G., Ugurbil, K., Harel, N., Toga, A., Lim, K. O. & Thompson, P. M., Jan 1 2014, In : Mathematics and Visualization. 0, p. 209-218 10 p.

Research output: Contribution to journalConference article

3 Scopus citations

Semiautomatic Segmentation of Brain Subcortical Structures from High-Field MRI

Kim, J., Lenglet, C., Duchin, Y., Sapiro, G. & Harel, N., Sep 2014, In : IEEE Journal of Biomedical and Health Informatics. 18, 5, p. 1678-1695 18 p., 6676825.

Research output: Contribution to journalArticle

22 Scopus citations
2013

A framework for linear and non-linear registration of diffusion-weighted MRIs using angular interpolation

Duarte-Carvajalino, J. M., Sapiro, G., Harel, N. & Lenglet, C., Jun 17 2013, In : Frontiers in Neuroscience. 7 APR, Article 41.

Research output: Contribution to journalArticle

7 Scopus citations

Cerebral blood volume MRI with intravascular superparamagnetic iron oxide nanoparticles

Kim, S. G., Harel, N., Jin, T., Kim, T., Lee, P. & Zhao, F., Aug 1 2013, In : NMR in biomedicine. 26, 8, p. 949-962 14 p.

Research output: Contribution to journalArticle

68 Scopus citations

Magnetic resonance field strength effects on diffusion measures and brain connectivity networks

Zhan, L., Mueller, B. A., Jahanshad, N., Jin, Y., Lenglet, C., Yacoub, E., Sapiro, G., Ugurbil, K., Harel, N., Toga, A. W., Lim, K. O. & Thompson, P. M., Feb 1 2013, In : Brain connectivity. 3, 1, p. 72-86 15 p.

Research output: Contribution to journalArticle

25 Scopus citations

Pushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project

Uǧurbil, K., Xu, J., Auerbach, E. J., Moeller, S., Vu, A. T., Duarte-Carvajalino, J. M., Lenglet, C., Wu, X., Schmitter, S., Van de Moortele, P. F., Strupp, J., Sapiro, G., De Martino, F., Wang, D., Harel, N., Garwood, M., Chen, L., Feinberg, D. A., Smith, S. M., Miller, K. L. & 7 others, Sotiropoulos, S. N., Jbabdi, S., Andersson, J. L. R., Behrens, T. E. J., Glasser, M. F., Van Essen, D. C. & Yacoub, E., Oct 15 2013, In : NeuroImage. 80, p. 80-104 25 p.

Research output: Contribution to journalArticle

343 Scopus citations
2012
9 Scopus citations

Comprehensive in vivo mapping of the human basal ganglia and thalamic connectome in individuals using 7T MRI

Lenglet, C., Abosch, A., Yacoub, E., de Martino, F., Sapiro, G. & Harel, N., Jan 3 2012, In : PloS one. 7, 1, e29153.

Research output: Contribution to journalArticle

98 Scopus citations

Feasibility of using ultra-high field (7 T) MRI for clinical surgical targeting

Duchin, Y., Abosch, A., Yacoub, E., Sapiro, G. & Harel, N., May 17 2012, In : PloS one. 7, 5, e37328.

Research output: Contribution to journalArticle

57 Scopus citations

Heating induced near deep brain stimulation lead electrodes during magnetic resonance imaging with a 3 T transceive volume head coil

Shrivastava, D., Abosch, A., Hughes, J., Goerke, U., Delabarre, L., Visaria, R., Harel, N. & Thomas Vaughan, J., Sep 7 2012, In : Physics in Medicine and Biology. 57, 17, p. 5651-5665 15 p.

Research output: Contribution to journalArticle

23 Scopus citations

Layer-specific fmri reflects different neuronal computations at different depths in human V1

Olman, C. A., Harel, N., Feinberg, D. A., He, S., Zhang, P., Ugurbil, K. & Yacoub, E., Mar 20 2012, In : PloS one. 7, 3, e32536.

Research output: Contribution to journalArticle

96 Scopus citations

The Human Connectome Project: A data acquisition perspective

Van Essen, D. C., Ugurbil, K., Auerbach, E., Barch, D., Behrens, T. E. J., Bucholz, R., Chang, A., Chen, L., Corbetta, M., Curtiss, S. W., Della Penna, S., Feinberg, D., Glasser, M. F., Harel, N., Heath, A. C., Larson-Prior, L., Marcus, D., Michalareas, G., Moeller, S., Oostenveld, R. & 7 others, Petersen, S. E., Prior, F., Schlaggar, B. L., Smith, S. M., Snyder, A. Z., Xu, J. & Yacoub, E., Oct 1 2012, In : NeuroImage. 62, 4, p. 2222-2231 10 p.

Research output: Contribution to journalReview article

702 Scopus citations

Ultra high resolution fMRI at ultra-high field

Harel, N., Aug 15 2012, In : NeuroImage. 62, 2, p. 1024-1028 5 p.

Research output: Contribution to journalReview article

14 Scopus citations
2011

A Hough transform global probabilistic approach to multiple-subject diffusion MRI tractography

Aganj, I., Lenglet, C., Jahanshad, N., Yacoub, E., Harel, N., Thompson, P. M. & Sapiro, G., Aug 1 2011, In : Medical Image Analysis. 15, 4, p. 414-425 12 p.

Research output: Contribution to journalArticle

103 Scopus citations

Differential information content in staggered multiple shell hardi measured by the tensor distribution function

Zhan, L., Leow, A. D., Aganj, I., Lenglet, C., Sapiro, G., Yacoub, E., Harel, N., Toga, A. W. & Thompson, P. M., Nov 2 2011, 2011 8th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI'11. p. 305-309 5 p. 5872411. (Proceedings - International Symposium on Biomedical Imaging).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

20 Scopus citations

Whole brain high-resolution functional imaging at ultra high magnetic fields: An application to the analysis of resting state networks

De Martino, F., Esposito, F., van de Moortele, P. F., Harel, N., Formisano, E., Goebel, R., Ugurbil, K. & Yacoub, E., Aug 1 2011, In : NeuroImage. 57, 3, p. 1031-1044 14 p.

Research output: Contribution to journalArticle

48 Scopus citations
2010

An assessment of current brain targets for deep brain stimulation surgery with susceptibility-weighted imaging at 7 tesla

Abosch, A., Yacoub, E., Ugurbil, K. & Harel, N., Dec 1 2010, In : Neurosurgery. 67, 6, p. 1745-1756 12 p.

Research output: Contribution to journalArticle

127 Scopus citations
5 Scopus citations
650 Scopus citations
243 Scopus citations
2009

Detection of neuronal loss using T MRI assessment of 1H2O spin dynamics in the aphakia mouse

Michaeli, S., Burns, T. C., Kudishevich, E., Harel, N., Hanson, T., Sorce, D. J., Garwood, M. & Low, W. C., Feb 15 2009, In : Journal of Neuroscience Methods. 177, 1, p. 160-167 8 p.

Research output: Contribution to journalArticle

11 Scopus citations

Multiple Q-shell ODF reconstruction in Q-ball imaging

Aganj, I., Lenglet, C., Sapiro, G., Yacoub, E., Ugurbil, K. & Harel, N., 2009, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). PART 2 ed. Vol. 5762 LNCS. p. 423-431 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5762 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

10 Scopus citations
2008
30 Scopus citations
339 Scopus citations
2006

Combined imaging-histological study of cortical laminar specificity of fMRI signals

Harel, N., Lin, J., Moeller, S., Ugurbil, K. & Yacoub, E., Feb 1 2006, In : NeuroImage. 29, 3, p. 879-887 9 p.

Research output: Contribution to journalArticle

125 Scopus citations