20092020

Research output per year

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Research Output

2019

Biological control of invasive fish and aquatic invertebrates: A brief review with case studies

Bajer, P. G., Ghosal, R., Maselko, M., Smanski, M. J., Lechelt, J. D., Hansen, G. & Kornis, M. S., Jun 2019, In : Management of Biological Invasions. 10, 2, p. 227-254 28 p.

Research output: Contribution to journalReview article

Open Access
1 Scopus citations

Complete genome sequences of Streptomyces spp. isolated from disease-suppressive soils

Heinsch, S. C., Hsu, S. Y., Otto-Hanson, L., Kinkel, L. & Smanski, M. J., Dec 19 2019, In : BMC Genomics. 20, 1, 994.

Research output: Contribution to journalArticle

Open Access

Genetic manipulation of sex ratio in mammals: the Reaper comes for Mickey

Smanski, M. J. & Zarkower, D., Jan 1 2019, In : EMBO Reports. 20, 8, e48577.

Research output: Contribution to journalComment/debate

Model-Driven Engineering of N-Linked Glycosylation in Chinese Hamster Ovary Cells

Stach, C. S., McCann, M. G., O'Brien, C. M., Le, T. S., Somia, N., Chen, X., Lee, K., Fu, H. Y., Daoutidis, P., Zhao, L., Hu, W. S. & Smanski, M., Nov 15 2019, In : ACS Synthetic Biology. 8, 11, p. 2524-2535 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Semisynthesis of the Neuroprotective Metabolite, Serofendic Acid

Hsu, S. Y., Perusse, D., Hougard, T. & Smanski, M. J., Oct 18 2019, In : ACS Synthetic Biology. 8, 10, p. 2397-2403 7 p.

Research output: Contribution to journalArticle

1 Scopus citations

Stereoselective semi-synthesis of the neuroprotective natural product, serofendic acid

Perusse, D. & Smanski, M. J., Jan 1 2019, In : MedChemComm. 10, 6, p. 951-960 10 p.

Research output: Contribution to journalArticle

2018

Designing and implementing algorithmic DNA assembly pipelines for multi-gene systems

Hsu, S. Y. & Smanski, M. J., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 131-147 17 p. (Methods in Molecular Biology; vol. 1671).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations
Open Access
1 Scopus citations

Single Copy Transgene Integration in a Transcriptionally Active Site for Recombinant Protein Synthesis

O'Brien, S. A., Lee, K., Fu, H. Y., Lee, Z., Le, T. S., Stach, C. S., McCann, M. G., Zhang, A. Q., Smanski, M. J., Somia, N. V. & Hu, W. S., Oct 2018, In : Biotechnology Journal. 13, 10, 1800226.

Research output: Contribution to journalArticle

Open Access
7 Scopus citations
2017

Engineering species-like barriers to sexual reproduction

Maselko, M., Heinsch, S. C., Chacón, J. M., Harcombe, W. R. & Smanski, M. J., Dec 1 2017, In : Nature communications. 8, 1, 883.

Research output: Contribution to journalArticle

Open Access
13 Scopus citations

Genetic Design via Combinatorial Constraint Specification

Bhatia, S. P., Smanski, M. J., Voigt, C. A. & Densmore, D. M., Nov 17 2017, In : ACS Synthetic Biology. 6, 11, p. 2130-2135 6 p.

Research output: Contribution to journalArticle

9 Scopus citations

Genome sequences for Streptomyces spp. isolated from diseasesuppressive soils and long-term ecological research sites

Heinsch, S. C., Otto-Hanson, L., Hsu, S. Y., Kinkel, L. & Smanski, M. J., Jan 1 2017, In : Genome Announcements. 5, 23, e00493-17.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Meeting Report for Synthetic Biology for Natural Products 2017: The Interface of (Meta)Genomics, Machine Learning, and Natural Product Discovery

Smanski, M. J., Mead, D., Gustafsson, C. & Thomas, M. G., May 19 2017, In : ACS Synthetic Biology. 6, 5, p. 737-743 7 p.

Research output: Contribution to journalEditorial

Open Access
4 Scopus citations
2016

Leveraging ecological theory to guide natural product discovery

Smanski, M. J., Schlatter, D. C. & Kinkel, L. L., Mar 1 2016, In : Journal of Industrial Microbiology and Biotechnology. 43, 2-3, p. 115-128 14 p.

Research output: Contribution to journalArticle

18 Scopus citations

Synthetic biology to access and expand nature's chemical diversity

Smanski, M. J., Zhou, H., Claesen, J., Shen, B., Fischbach, M. A. & Voigt, C. A., Feb 15 2016, In : Nature Reviews Microbiology. 14, 3, p. 135-149 15 p.

Research output: Contribution to journalReview article

Open Access
212 Scopus citations
2015

Minimum Information about a Biosynthetic Gene cluster

Medema, M. H., Kottmann, R., Yilmaz, P., Cummings, M., Biggins, J. B., Blin, K., De Bruijn, I., Chooi, Y. H., Claesen, J., Coates, R. C., Cruz-Morales, P., Duddela, S., Düsterhus, S., Edwards, D. J., Fewer, D. P., Garg, N., Geiger, C., Gomez-Escribano, J. P., Greule, A., Hadjithomas, M. & 134 others, Haines, A. S., Helfrich, E. J. N., Hillwig, M. L., Ishida, K., Jones, A. C., Jones, C. S., Jungmann, K., Kegler, C., Kim, H. U., Kötter, P., Krug, D., Masschelein, J., Melnik, A. V., Mantovani, S. M., Monroe, E. A., Moore, M., Moss, N., Nützmann, H. W., Pan, G., Pati, A., Petras, D., Reen, F. J., Rosconi, F., Rui, Z., Tian, Z., Tobias, N. J., Tsunematsu, Y., Wiemann, P., Wyckoff, E., Yan, X., Yim, G., Yu, F., Xie, Y., Aigle, B., Apel, A. K., Balibar, C. J., Balskus, E. P., Barona-Gómez, F., Bechthold, A., Bode, H. B., Borriss, R., Brady, S. F., Brakhage, A. A., Caffrey, P., Cheng, Y. Q., Clardy, J., Cox, R. J., De Mot, R., Donadio, S., Donia, M. S., Van Der Donk, W. A., Dorrestein, P. C., Doyle, S., Driessen, A. J. M., Ehling-Schulz, M., Entian, K. D., Fischbach, M. A., Gerwick, L., Gerwick, W. H., Gross, H., Gust, B., Hertweck, C., Höfte, M., Jensen, S. E., Ju, J., Katz, L., Kaysser, L., Klassen, J. L., Keller, N. P., Kormanec, J., Kuipers, O. P., Kuzuyama, T., Kyrpides, N. C., Kwon, H. J., Lautru, S., Lavigne, R., Lee, C. Y., Linquan, B., Liu, X., Liu, W., Luzhetskyy, A., Mahmud, T., Mast, Y., Méndez, C., Metsä-Ketelä, M., Micklefield, J., Mitchell, D. A., Moore, B. S., Moreira, L. M., Müller, R., Neilan, B. A., Nett, M., Nielsen, J., O'Gara, F., Oikawa, H., Osbourn, A., Osburne, M. S., Ostash, B., Payne, S. M., Pernodet, J. L., Petricek, M., Piel, J., Ploux, O., Raaijmakers, J. M., Salas, J. A., Schmitt, E. K., Scott, B., Seipke, R. F., Shen, B., Sherman, D. H., Sivonen, K., Smanski, M. J., Sosio, M., Stegmann, E., Süssmuth, R. D., Tahlan, K., Thomas, C. M., Tang, Y., Truman, A. W., Viaud, M., Walton, J. D., Walsh, C. T., Weber, T., Van Wezel, G. P., Wilkinson, B., Willey, J. M., Wohlleben, W., Wright, G. D., Ziemert, N., Zhang, C., Zotchev, S. B., Breitling, R., Takano, E. & Glöckner, F. O., Aug 18 2015, In : Nature Chemical Biology. 11, 9, p. 625-631 7 p.

Research output: Contribution to journalReview article

314 Scopus citations
2014

Functional optimization of gene clusters by combinatorial design and assembly

Smanski, M. J., Bhatia, S., Zhao, D., Park, Y. J., Woodruff, L. B. A., Giannoukos, G., Ciulla, D., Busby, M., Calderon, J., Nicol, R., Gordon, D. B., Densmore, D. & Voigt, C. A., Dec 1 2014, In : Nature biotechnology. 32, 12, p. 1241-1249 9 p.

Research output: Contribution to journalArticle

172 Scopus citations

Mechanisms of self-resistance in the Platensimycin- and platencin-producing streptomyces platensis MA7327 and MA7339 strains

Peterson, R. M., Huang, T., Rudolf, J. D., Smanski, M. J. & Shen, B., Mar 20 2014, In : Chemistry and Biology. 21, 3, p. 389-397 9 p.

Research output: Contribution to journalArticle

22 Scopus citations

Scalable, accurate, and systematic engineering of synthetic pathways: Massively multiplexed DNA assembly, next-gen sequence verification, and model-guided design

Woodruff, L. B. A., Mikkelsen, T., Smanski, M. J., Gordon, D. B., Voigt, C. A. & Nicol, R., Jan 1 2014, Systems Biology 2014 - Topical Conference at the 2014 AIChE Annual Meeting. AIChE, 1 p. (Systems Biology 2014 - Topical Conference at the 2014 AIChE Annual Meeting).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013

Isolation and structural elucidation of glucoside congeners of platencin from Streptomyces platensis SB12600

Yu, Z., Rateb, M. E., Smanski, M. J., Peterson, R. M. & Shen, B., May 1 2013, In : Journal of Antibiotics. 66, 5, p. 291-294 4 p.

Research output: Contribution to journalArticle

11 Scopus citations
2012

Bacterial diterpene synthases: New opportunities for mechanistic enzymology and engineered biosynthesis

Smanski, M. J., Peterson, R. M., Huang, S. X. & Shen, B., Apr 1 2012, In : Current opinion in chemical biology. 16, 1-2, p. 132-141 10 p.

Research output: Contribution to journalReview article

61 Scopus citations

Biosynthesis of Pharmaceutical Natural Products and Their Pathway Engineering

Smanski, M. J., Qu, X. D., Liu, W., Shen, B., Tang, Y., Yu, Y. & Deng, Z. X., Aug 23 2012, Organic Chemistry: Breakthroughs and Perspectives. wiley, p. 125-180 56 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Expression of the platencin biosynthetic gene cluster in heterologous hosts yielding new platencin congeners

Smanski, M. J., Casper, J., Peterson, R. M., Yu, Z., Rajski, S. R. & Shen, B., Dec 28 2012, In : Journal of Natural Products. 75, 12, p. 2158-2167 10 p.

Research output: Contribution to journalArticle

30 Scopus citations
5 Scopus citations
2011

Dedicated ent-kaurene and ent-atiserene synthases for platensimycin and platencin biosynthesis

Smanski, M. J., Yu, Z., Casper, J., Lin, S., Peterson, R. M., Chen, Y., Wendt-Pienkowski, E., Rajski, S. R. & Shen, B., Aug 16 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 33, p. 13498-13503 6 p.

Research output: Contribution to journalArticle

74 Scopus citations
2010

Engineering of streptomyces platensis MA7339 for overproduction of platencin and congeners

Yu, Z., Smanski, M. J., Peterson, R. M., Marchillo, K., Andes, D., Rajski, S. R. & Shen, B., Apr 16 2010, In : Organic Letters. 12, 8, p. 1744-1747 4 p.

Research output: Contribution to journalArticle

36 Scopus citations

Improvement of secondary metabolite production in Streptomyces by manipulating pathway regulation

Chen, Y., Smanski, M. J. & Shen, B., Mar 1 2010, In : Applied Microbiology and Biotechnology. 86, 1, p. 19-25 7 p.

Research output: Contribution to journalShort survey

74 Scopus citations
2009

Engineered streptomyces platensis strains that overproduce antibiotics platensimycin and platencin

Smanski, M. J., Peterson, R. M., Rajski, S. R. & Shen, B., Apr 2009, In : Antimicrobial agents and chemotherapy. 53, 4, p. 1299-1304 6 p.

Research output: Contribution to journalArticle

64 Scopus citations