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Research Output 1987 2019

2019
1 Citation (Scopus)

Biological control of Fusarium crown and root rot of wheat by Streptomyces isolates – It’s complicated

Winter, M., Samuels, P. L., Hanson, L. K., Dill-Macky, R. & Kinkel, L. L., Jan 1 2019, In : Phytobiomes Journal. 3, 1, p. 52-60 9 p.

Research output: Contribution to journalArticle

Open Access
crown rot
root rot
Streptomyces
Fusarium
Crowns

Carbon amendments induce shifts in nutrient use, inhibitory, and resistance phenotypes among soilborne Streptomyces

Dundore-Arias, J. P., Felice, L., DIll-Macky, R. & Kinkel, L. L., Jan 1 2019, In : Frontiers in Microbiology. 10, MAR, 498.

Research output: Contribution to journalArticle

Open Access
Streptomyces
Soil
Carbon
Phenotype
Food
Streptomyces
phenotype
habitat
habitats
soil
1 Citation (Scopus)

Effects of nutrient supply, herbivory, and host community on fungal endophyte diversity

Seabloom, E., Condon, B., Kinkel, L. L., Komatsu, K. J., Lumibao, C. Y., May, G., McCulley, R. L. & Borer, E., Sep 1 2019, In : Ecology. 100, 9, e02758.

Research output: Contribution to journalArticle

endophyte
endophytes
herbivory
herbivores
nutrient
agricultural soils
agricultural soil
microbial communities
microbial community
sampling

Inhibitory and nutrient use phenotypes among coexisting Fusarium and Streptomyces populations suggest local coevolutionary interactions in soil

Essarioui, A., LeBlanc, N., Hanson, L. K., Schlatter, D. C., Kistler, H. C. & Kinkel, L. L., Jan 1 2019, (Accepted/In press) In : Environmental microbiology.

Research output: Contribution to journalArticle

nutrient use
Streptomyces
Fusarium
antibiotics
phenotype

Inhibitory interaction networks among coevolved Streptomyces populations from prairie soils

Schlatter, D. C., Song, Z., Vaz-Jauri, P. & Kinkel, L. L., Oct 2019, In : PloS one. 14, 10, e0223779.

Research output: Contribution to journalArticle

Open Access
prairie soils
Streptomyces
Soil
Soils
sympatry
1 Citation (Scopus)

Manipulating wild and tamed phytobiomes: Challenges and opportunities

Bell, T. H., Hockett, K. L., Alcalá-Briseño, R. I., Barbercheck, M., Beattie, G. A., Bruns, M. A., Carlson, J. E., Chung, T., Collins, A., Emmett, B., Esker, P., Garrett, K. A., Glenna, L., Gugino, B. K., Del Mar Jiménez-Gasco, M., Kinkel, L., Kovac, J., Kowalski, K. P., Kuldau, G., Leveau, J. H. J. & 10 others, Michalska-Smith, M. J., Myrick, J., Peter, K., Salazar, M. F. V., Shade, A., Stopnisek, N., Tan, X., Welty, A. T., Wickings, K. & Yergeau, E., Jan 1 2019, In : Phytobiomes Journal. 3, 1, p. 3-21 19 p.

Research output: Contribution to journalReview article

Open Access
Agricultural Inoculants
plant health
plant genetics
technology diffusion
animal communication

Site-specific responses of foliar fungal microbiomes to nutrient addition and herbivory at different spatial scales

Lumibao, C. Y., Borer, E. T., Condon, B., Kinkel, L., May, G. & Seabloom, E. W., Nov 1 2019, In : Ecology and Evolution. 9, 21, p. 12231-12244 14 p.

Research output: Contribution to journalArticle

Open Access
herbivory
herbivores
phylogenetics
nutrient
phylogeny

Stability of grassland production is robust to changes in the consumer food web

Kohli, M., Borer, E., Kinkel, L. L. & Seabloom, E., Apr 1 2019, In : Ecology letters. 22, 4, p. 707-716 10 p.

Research output: Contribution to journalLetter

food webs
food web
grasslands
grassland
trophic interaction
2018
3 Citations (Scopus)

Cropping history effects on pathogen suppressive and signaling dynamics in Streptomyces communities

Jauri, P. V., Altier, N., Pérez, C. A. & Kinkel, L. L., Jan 1 2018, In : Phytobiomes Journal. 2, 1, p. 14-23 10 p.

Research output: Contribution to journalArticle

Open Access
cropping sequence
Streptomyces
cropping practice
Soil
pathogen
1 Citation (Scopus)

DNA template dilution impacts amplicon sequencing-based estimates of soil fungal diversity

Castle, S. C., Song, Z., Gohl, D. M., Gutknecht, J. L. M., Rosen, C. J., Sadowsky, M. J., Samac, D. A. & Kinkel, L. L., Jan 1 2018, In : Phytobiomes Journal. 2, 2, p. 100-107 8 p.

Research output: Contribution to journalArticle

Open Access
Microbiota
dilution
Soil
DNA
polymerase chain reaction
3 Citations (Scopus)

No evidence for trade-offs in plant responses to consumer food web manipulations

Seabloom, E. W., Borer, E. T. & Kinkel, L. L., Sep 2018, In : Ecology. 99, 9, p. 1953-1963 11 p.

Research output: Contribution to journalArticle

food webs
plant response
food web
herbivore
herbivores

Run-to-run sequencing variation can introduce taxon-specific bias in the evaluation of fungal microbiomes

Song, Z., Schlatter, D., Gohl, D. M. & Kinkel, L. L., Jan 1 2018, In : Phytobiomes Journal. 2, 3, p. 165-170 6 p.

Research output: Contribution to journalArticle

Open Access
Ascomycota
outlier
Quality Control
Soil
quality control

The year of phytobiomes

Young, C. A. & Kinkel, L. L., Jan 1 2018, In : Phytobiomes Journal. 2, 2, p. 53-54 2 p.

Research output: Contribution to journalEditorial

Open Access
2017
52 Citations (Scopus)

Disease suppressive soils: New insights from the soil microbiome

Schlatter, D., Kinkel, L., Thomashow, L., Weller, D. & Paulitz, T., Nov 2017, In : Phytopathology. 107, 11, p. 1284-1297 14 p.

Research output: Contribution to journalReview article

suppressive soils
Gaeumannomyces graminis var. tritici
soil
Rhizoctonia
pathogens
15 Citations (Scopus)

Food webs obscure the strength of plant diversity effects on primary productivity

Seabloom, E., Kinkel, L. L., Borer, E., Hautier, Y., Montgomery, R. A. & Tilman, D., Apr 1 2017, In : Ecology letters. 20, 4, p. 505-512 8 p.

Research output: Contribution to journalLetter

food webs
food web
primary productivity
productivity
arthropods
4 Citations (Scopus)

Frontiers for research on the ecology of plant-pathogenic bacteria: fundamentals for sustainability: Challenges in Bacterial Molecular Plant Pathology

Morris, C. E., Barny, M. A., Berge, O., Kinkel, L. L. & Lacroix, C., Feb 1 2017, In : Molecular Plant Pathology. 18, 2, p. 308-319 12 p.

Research output: Contribution to journalReview article

Plant Pathology
plant pathogenic bacteria
Molecular Pathology
plant pathology
pathology

Genome sequences for Streptomyces spp. isolated from diseasesuppressive soils and long-term ecological research sites

Heinsch, S. C., Otto-Hanson, L., Hsu, S. Y., Kinkel, L. & Smanski, M. J., Jan 1 2017, In : Genome Announcements. 5, 23, e00493-17.

Research output: Contribution to journalArticle

Streptomyces
Soil
Genome
Research
Ecology
4 Citations (Scopus)

Phylogeny, plant species, and plant diversity influence carbon use phenotypes among Fusarium populations in the rhizosphere microbiome

LeBlanc, N., Essarioui, A., Kinkel, L. L. & Kistler, H. C., Jan 1 2017, In : Phytobiomes Journal. 1, 3, p. 150-157 8 p.

Research output: Contribution to journalArticle

Rhizosphere
Microbiota
Fusarium
Phylogeny
rhizosphere
9 Citations (Scopus)
Streptomyces
monoculture
polyculture
Fusarium
rhizosphere
7 Citations (Scopus)

Plant diversity and plant identity influence Fusarium communities in soil

Leblanc, N., Kinkel, L. L. & Kistler, H. C., Jan 27 2017, In : Mycologia. 109, 1, p. 128-139 12 p.

Research output: Contribution to journalArticle

Fusarium
Soil
plant community
plant communities
polyculture
4 Citations (Scopus)

Soil conditioning affects interactions between native and invasive exotic perennials of semi-natural grasslands

Vink, S., Jordan, N. R., Aldrich-Wolfe, L., Huerd, S. C., Sheaffer, C. C. & Kinkel, L. L., Oct 1 2017, In : Journal of Applied Ecology. 54, 5, p. 1526-1533 8 p.

Research output: Contribution to journalArticle

conditioning
grassland
native species
soil
seedling
1 Citation (Scopus)

The arrival of phytobiomes

Young, C. A. & Kinkel, L. L., Jan 1 2017, In : Phytobiomes Journal. 1, 1, p. 3-4 2 p.

Research output: Contribution to journalEditorial

Open Access
2016
14 Citations (Scopus)

Leveraging ecological theory to guide natural product discovery

Smanski, M. J., Schlatter, D. C. & Kinkel, L. L., Mar 1 2016, In : Journal of Industrial Microbiology and Biotechnology. 43, 2-3, p. 115-128 14 p.

Research output: Contribution to journalArticle

Biological Products
Biosynthesis
Ecology
Ecosystems
Genes
46 Citations (Scopus)

Microbiome networks: A systems framework for identifying candidate microbial assemblages for disease management

Poudel, R., Jumpponen, A., Schlatter, D. C., Paulitz, T. C., McSpadden Gardener, B. B., Kinkel, L. L. & Garrett, K. A., Oct 2016, In : Phytopathology. 106, 10, p. 1083-1096 14 p.

Research output: Contribution to journalArticle

disease control
phyllosphere
plant health
Thanatephorus cucumeris
microbial communities
9 Citations (Scopus)
nutrient use
polyculture
Streptomyces
monoculture
plant community
1 Citation (Scopus)

Tree species effects on pathogen-suppressive capacities of soil bacteria across two tropical dry forests in Costa Rica

Becklund, K., Powers, J. S. & Kinkel, L. L., Nov 1 2016, In : Oecologia. 182, 3, p. 789-802 14 p.

Research output: Contribution to journalArticle

dry forest
soil bacteria
dry forests
Costa Rica
tropical forests
2015
8 Citations (Scopus)
Plant DNA
Endophytes
Metagenomics
Polymerase Chain Reaction
15 Citations (Scopus)

Do tradeoffs structure antibiotic inhibition, resistance, and resource use among soil-borne Streptomyces?

Schlatter, D. C. & Kinkel, L. L., Sep 15 2015, In : BMC evolutionary biology. 15, 1, 186.

Research output: Contribution to journalArticle

Streptomyces
resource use
antibiotics
soil
phenotype
12 Citations (Scopus)

Effort versus reward Preparing samples for fungal community characterization in high-throughput sequencing surveys of soils

Song, Z., Schlatter, D., Kennedy, P., Kinkel, L. L., Kistler, H. C., Nguyen, N. & Bates, S. T., May 14 2015, In : PloS one. 10, 5, e0127234.

Research output: Contribution to journalArticle

fungal communities
soil surveys
Reward
Ecosystem
Soil
9 Citations (Scopus)

Food-web composition and plant diversity control foliar nutrient content and stoichiometry

Borer, E. T., Lind, E. M., Ogdahl, E. J., Seabloom, E. W., Tilman, D., Montgomery, R. A. & Kinkel, L. L., Nov 2015, In : Journal of Ecology. 103, 6, p. 1432-1441 10 p.

Research output: Contribution to journalArticle

stoichiometry
food webs
food web
nutrient content
nutrient
5 Citations (Scopus)
Community-Institutional Relations
Streptomyces
Solanum tuberosum
potato
functional properties
59 Citations (Scopus)

Plant community richness and microbial interactions structure bacterial communities in soil

Schlatter, D. C., Bakker, M. G., Bradeen, J. M. & Kinkel, L. L., Jan 1 2015, In : Ecology. 96, 1, p. 134-142 9 p.

Research output: Contribution to journalArticle

soil bacteria
plant community
plant communities
soil
community composition
3 Citations (Scopus)

Soil conditioning effects of native and exotic grassland perennials on the establishment of native and exotic plants

Vink, S., Jordan, N. R., Huerd, S. C., Shaeffer, C. C., Kinkel, L. L. & Aldrich-Wolfe, L., Aug 29 2015, In : Plant and Soil. 393, 1-2, p. 335-349 15 p.

Research output: Contribution to journalArticle

conditioning
grasslands
grassland
facilitation
biomass
31 Citations (Scopus)

Soil Fungal Communities Respond to Grassland Plant Community Richness and Soil Edaphics

LeBlanc, N., Kinkel, L. L. & Kistler, H. C., Jul 28 2015, In : Microbial ecology. 70, 1, p. 188-195 8 p.

Research output: Contribution to journalArticle

soil fungi
fungal communities
plant community
plant communities
polyculture
2014
4 Citations (Scopus)

Antibiotics: Conflict and communication in microbial communities

Schlatter, D. C. & Kinkel, L. L., Jul 2014, In : Microbe. 9, 7, p. 282-288 7 p.

Research output: Contribution to journalArticle

Anti-Bacterial Agents
Microbial Drug Resistance
Microbial Interactions
Population
Weapons
53 Citations (Scopus)

Diffuse symbioses: Roles of plant-plant, plant-microbe and microbe-microbe interactions in structuring the soil microbiome

Bakker, M. G., Schlatter, D. C., Otto-Hanson, L. & Kinkel, L. L., Mar 2014, In : Molecular ecology. 23, 6, p. 1571-1583 13 p.

Research output: Contribution to journalArticle

Symbiosis
Microbiota
symbiosis
host plant
Soil
1 Citation (Scopus)

Erratum: Sympatric inhibition and niche differentiation suggest alternative coevolutionary trajectories among Streptomycetes (ISME Journal (2014) 8:2 (492)))

Kinkel, L. L., Schlatter, D. C., Xiao, K. & Baines, A. D., Feb 26 2014, In : ISME Journal. 8, 2, 1 p.

Research output: Contribution to journalComment/debate

trajectories
niche
niches
trajectory
17 Citations (Scopus)

Global biogeography of Streptomyces antibiotic inhibition, resistance, and resource use

Schlatter, D. C. & Kinkel, L. L., May 2014, In : FEMS microbiology ecology. 88, 2, p. 386-397 12 p.

Research output: Contribution to journalArticle

Streptomyces
Microbial Drug Resistance
resource use
biogeography
antibiotics
4 Citations (Scopus)

Landscape-scale Variation in Pathogen-suppressive bacteria in tropical dry forest soils of Costa Rica

Becklund, K. K., Kinkel, L. L. & Powers, J. S., Nov 1 2014, In : Biotropica. 46, 6, p. 657-666 10 p.

Research output: Contribution to journalArticle

dry forest
dry forests
Streptomyces
Costa Rica
tropical forests
8 Citations (Scopus)
Streptomyces
relatedness
phenotype
Phenotype
Food
2 Citations (Scopus)
Streptomyces
prairies
prairie
host plant
host plants
45 Citations (Scopus)

Sympatric inhibition and niche differentiation suggest alternative coevolutionary trajectories among Streptomycetes

Kinkel, L. L., Schlatter, D. C., Xiao, K. & Baines, A. D., Feb 26 2014, In : ISME Journal. 8, 2, p. 249-256 8 p.

Research output: Contribution to journalArticle

antibiotics
trajectories
niche
niches
trajectory
4 Citations (Scopus)
soil bacteria
community structure
grass
grasses
greenhouses
2013
2 Citations (Scopus)

Effect of wheel traffic and green manure treatments on forage yield and crown rot in alfalfa (Medicago sativa)

Samac, D. A., Lamb, J. A. F. S., Kinkel, L. L. & Hanson, L. K., Nov 1 2013, In : Plant and Soil. 372, 1-2, p. 349-359 11 p.

Research output: Contribution to journalArticle

crown rot
forage yield
green manures
wheels
alfalfa
25 Citations (Scopus)

Effects of plant host species and plant community richness on streptomycete community structure

Bakker, M. G., Bradeen, J. M. & Kinkel, L. L., Mar 1 2013, In : FEMS microbiology ecology. 83, 3, p. 596-606 11 p.

Research output: Contribution to journalArticle

host plant
plant community
community structure
Soil
soil
17 Citations (Scopus)
Streptomyces
antagonists
biological control
urea
pathogens
25 Citations (Scopus)

Plant monocultures produce more antagonistic soil Streptomyces communities than high-diversity plant communities

Bakker, M. G., Hanson, L. K., Lange, A. J., Bradeen, J. & Kinkel, L. L., Oct 1 2013, In : Soil Biology and Biochemistry. 65, p. 304-312 9 p.

Research output: Contribution to journalArticle

Streptomyces
monoculture
plant community
plant communities
Soil
16 Citations (Scopus)

Resource Use of Soilborne Streptomyces Varies with Location, Phylogeny, and Nitrogen Amendment

Schlatter, D. C., DavelosBaines, A. L., Xiao, K. & Kinkel, L. L., Nov 1 2013, In : Microbial Ecology. 66, 4, p. 961-971 11 p.

Research output: Contribution to journalArticle

Streptomyces
resource use
phylogeny
nitrogen
soil