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Personal profile

Research interests

  • bioinformatics

Fingerprint The Fingerprint is created by mining the titles and abstracts of the person's research outputs and projects/funding awards to create an index of weighted terms from discipline-specific thesauri.

  • 1 Similar Profiles
Genes Chemical Compounds
Beauty Medicine & Life Sciences
Gene Transfer Techniques Medicine & Life Sciences
Transgenes Medicine & Life Sciences
transposons Agriculture & Biology
Swine Medicine & Life Sciences
transgenes Agriculture & Biology
Genetic Recombination Medicine & Life Sciences

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Research Output 2002 2019

1 Citation (Scopus)

Measuring sequencer size bias using REcount: A novel method for highly accurate Illumina sequencing-based quantification

Gohl, D. M., Magli, A., Garbe, J. R., Becker, A., Johnson, D. M., Anderson, S., Auch, B. J., Billstein, B., Froehling, E., McDevitt, S. L. & Beckman, K. B., Apr 29 2019, In : Genome biology. 20, 1, 85.

Research output: Contribution to journalArticle

Open Access
plasmid
Polymerase Chain Reaction
plasmids
Plasmids
transposons
4 Citations (Scopus)

A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa

Zhang, H., Lee, C. A. A., Li, Z., Garbe, J. R., Eide, C. R., Petegrosso, R., Kuang, R. & Tolar, J., Apr 1 2018, In : PLoS Computational Biology. 14, 4, e1006053.

Research output: Contribution to journalArticle

Open Access
epidermolysis bullosa
Epidermolysis Bullosa Dystrophica
RNA
Cluster Analysis
Clustering
6 Citations (Scopus)

Genomic inbreeding and relatedness in wild panda populations

Garbe, J. R., Prakapenka, D., Tan, C. & Da, Y., Aug 1 2016, In : PloS one. 11, 8, e0160496.

Research output: Contribution to journalArticle

Inbreeding
inbreeding
Ecosystem
Conservation
Genes
2 Citations (Scopus)

Heterotypic mouse models of canine osteosarcoma recapitulate tumor heterogeneity and biological behavior

Scott, M. C., Tomiyasu, H., Garbe, J. R., Cornax, I., Amaya, C., O'Sullivan, M. G., Subramanian, S., Bryan, B. A. & Modiano, J. F., Dec 1 2016, In : DMM Disease Models and Mechanisms. 9, 12, p. 1435-1444 10 p.

Research output: Contribution to journalArticle

Osteosarcoma
Canidae
Tumors
Heterografts
Cells
124 Citations (Scopus)

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies

Gohl, D. M., Vangay, P., Garbe, J. R., MacLean, A., Hauge, A., Becker, A., Gould, T. J., Clayton, J. B., Johnson, T., Hunter, R. C., Knights, D. & Beckman, K. B., Sep 1 2016, In : Nature biotechnology. 34, 9, p. 942-949 8 p.

Research output: Contribution to journalArticle

Microbiota
Genes
Libraries
Amplification
Practice Guidelines

Datasets