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John R Garbe

 https://orcid.org/0000-0002-9745-7378
20022020

Research output per year

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Personal profile

Research interests

  • bioinformatics

Fingerprint The Fingerprint is created by mining the titles and abstracts of the person's research outputs and projects/funding awards to create an index of weighted terms from discipline-specific thesauri.

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Projects

Genetic Mechanism of Reproductive Heterosis in dairy cattle

Da, Y. & Garbe, J. R.

USDA Nat'l Inst. of Food & Agriculture

6/1/20 → 5/31/23

Project: Research project

    • Research Output

    Measuring sequencer size bias using REcount: A novel method for highly accurate Illumina sequencing-based quantification

    Gohl, D. M., Magli, A., Garbe, J., Becker, A., Johnson, D. M., Anderson, S., Auch, B., Billstein, B., Froehling, E., McDevitt, S. L. & Beckman, K. B., Apr 29 2019, In : Genome biology. 20, 1, 85.

    Research output: Contribution to journal › Article

    Open Access
    • 4 Scopus citations

    A multitask clustering approach for single-cell RNA-seq analysis in Recessive Dystrophic Epidermolysis Bullosa

    Zhang, H., Lee, C. A. A., Li, Z., Garbe, J. R., Eide, C. R., Petegrosso, R., Kuang, R. & Tolar, J., Apr 2018, In : PLoS computational biology. 14, 4, e1006053.

    Research output: Contribution to journal › Article

    Open Access
    • 9 Scopus citations

    EditR: A Method to Quantify Base Editing from Sanger Sequencing

    Kluesner, M. G., Nedveck, D. A., Lahr, W. S., Garbe, J. R., Abrahante, J. E., Webber, B. R. & Moriarity, B. S., Jun 1 2018, In : The CRISPR journal. 1, p. 239-250 12 p.

    Research output: Contribution to journal › Article

    Open Access

    • Genomic inbreeding and relatedness in wild panda populations

    Garbe, J. R., Prakapenka, D., Tan, C. & Da, Y., Aug 2016, In : PloS one. 11, 8, e0160496.

    Research output: Contribution to journal › Article

    Open Access
    • 7 Scopus citations

    Heterotypic mouse models of canine osteosarcoma recapitulate tumor heterogeneity and biological behavior

    Scott, M. C., Tomiyasu, H., Garbe, J. R., Cornax, I., Amaya, C., O'Sullivan, M. G., Subramanian, S., Bryan, B. A. & Modiano, J. F., Dec 1 2016, In : DMM Disease Models and Mechanisms. 9, 12, p. 1435-1444 10 p.

    Research output: Contribution to journal › Article

    Open Access
    • 5 Scopus citations

    Datasets

    Single Nucleotide Polymorphism Calls for 49 Giant Pandas

    Da, Y. & Garbe, J. R., Data Repository for the University of Minnesota, 2015

    DOI: 10.13020/D6MS32, http://dx.doi.org/10.13020/D6MS32

    Dataset