Joe Koopmeiners

20052024
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Research Output 2005 2019

2013
5 Citations (Scopus)

Discussion of 'Small-sample behavior of novel phase i cancer trial designs' by Assaf P Oron and Peter D Hoff

Carlin, B., Zhong, W. & Koopmeiners, J., Feb 1 2013, In : Clinical Trials. 10, 1, p. 81-85 5 p.

Research output: Contribution to journalComment/debate

Antineoplastic Agents
Neoplasms
6 Citations (Scopus)

Early termination of a two-stage study to develop and validate a panel of biomarkers

Koopmeiners, J. & Vogel, R. I., Mar 15 2013, In : Statistics in Medicine. 32, 6, p. 1027-1037 11 p.

Research output: Contribution to journalArticle

Medical Futility
Early Termination
Biomarkers
Sample Size
Stopping Rule
1 Citation (Scopus)

Flexible link continual reassessment methods for trivariate binary outcome phase I/II Trials

Zhong, W., Carlin, B. & Koopmeiners, J., Jan 1 2013, In : Journal of Statistical Theory and Practice. 7, 2, p. 442-455 14 p.

Research output: Contribution to journalArticle

Continual Reassessment Method
Trivariate
Binary Outcomes
Efficacy
Toxicity
5 Citations (Scopus)

Kinetics of O6-pyridyloxobutyl-2′-deoxyguanosine repair by human O6-alkylguanine DNA alkyltransferase

Kotandeniya, D., Murphy, D., Yan, S., Park, S., Seneviratne, U., Koopmeiners, J. S., Pegg, A., Kanugula, S., Kassie, F. & Tretyakova, N., Jun 11 2013, In : Biochemistry. 52, 23, p. 4075-4088 14 p.

Research output: Contribution to journalArticle

Deoxyguanosine
Repair
Kinetics
DNA sequences
DNA
23 Citations (Scopus)

Quantitative multiparametric MRI of ovarian cancer

Carter, J. S., Koopmeiners, J., Kuehn-Hajder, J. E., Metzger, G., Lakkadi, N., Downs, L. S. & Bolan, P. J., Dec 1 2013, In : Journal of Magnetic Resonance Imaging. 38, 6, p. 1501-1509 9 p.

Research output: Contribution to journalArticle

Ovarian Neoplasms
Magnetic Resonance Imaging
Area Under Curve
Research Ethics Committees
ROC Curve
1 Citation (Scopus)

Trends in pneumonia hospitalizations in Hennepin County, Minnesota, 1999-2010

Iroh Tam, P-Y. & Koopmeiners, J., Jan 1 2013, In : Mayo Clinic Proceedings. 88, 10, p. 1181-1182 2 p.

Research output: Contribution to journalLetter

Pneumonia
Hospitalization
2012
1 Citation (Scopus)
professional sports
regression
fan
salary
Sports
18 Citations (Scopus)

A trivariate continual reassessment method for phase I/II trials of toxicity, efficacy, and surrogate efficacy

Zhong, W., Koopmeiners, J. & Carlin, B., Dec 20 2012, In : Statistics in Medicine. 31, 29, p. 3885-3895 11 p.

Research output: Contribution to journalArticle

Continual Reassessment Method
Trivariate
Toxicity
Efficacy
Bayes Theorem
12 Citations (Scopus)

Conditional estimation after a two-stage diagnostic biomarker study that allows early termination for futility

Koopmeiners, J., Feng, Z. & Pepe, M. S., Feb 28 2012, In : Statistics in Medicine. 31, 5, p. 420-435 16 p.

Research output: Contribution to journalArticle

Medical Futility
Early Termination
Biomarkers
Diagnostics
Confidence Intervals
17 Citations (Scopus)

Intermediate-term outcomes after renal cryoablation: Results of a multi-institutional study

Duffey, B., Nguyen, V., Lund, E., Koopmeiners, J., Hulbert, J. & Anderson, K., Jan 1 2012, In : Journal of Endourology. 26, 1, p. 15-20 6 p.

Research output: Contribution to journalArticle

Cryosurgery
Kidney
Confidence Intervals
Recurrence
Neoplasms
2011
4 Citations (Scopus)

Asymptotic properties of the sequential empirical ROC, PPV and NPV curves under case-control sampling

Koopmeiners, J. & Feng, Z., Jan 1 2011, In : Annals of Statistics. 39, 6, p. 3234-3261 28 p.

Research output: Contribution to journalArticle

Case-control
Operating Characteristics
Asymptotic Properties
Receiver
Biomarkers
30 Citations (Scopus)

Sample collection and handling considerations for peptidomic studies in whole saliva; implications for biomarker discovery

de Jong, E., Van Riper, S. K., Koopmeiners, J., Carlis, J. V. & Griffin, T. J., Nov 20 2011, In : Clinica Chimica Acta. 412, 23-24, p. 2284-2288 5 p.

Research output: Contribution to journalArticle

Biomarkers
Saliva
Freezing
Peptides
Nutritional Status
2010
24 Citations (Scopus)

CYP17 polymorphisms and prostate cancer outcomes

Wright, J. L., Kwon, E. M., Lin, D. W., Kolb, S., Koopmeiners, J. S., Feng, Z., Ostrander, E. A. & Stanford, J. L., Jul 1 2010, In : Prostate. 70, 10, p. 1094-1101 8 p.

Research output: Contribution to journalArticle

Steroid 17-alpha-Hydroxylase
Prostatic Neoplasms
Genes
Single Nucleotide Polymorphism
Recurrence
70 Citations (Scopus)

Genetic variation in DNA repair genes and prostate cancer risk: Results from a population-based study

Agalliu, I., Kwon, E. M., Salinas, C. A., Koopmeiners, J. S., Ostrander, E. A. & Stanford, J. L., Feb 1 2010, In : Cancer Causes and Control. 21, 2, p. 289-300 12 p.

Research output: Contribution to journalArticle

DNA Repair
Prostatic Neoplasms
Single Nucleotide Polymorphism
Population
Genes
19 Citations (Scopus)

Population-based study of the association of variants in mismatch repair genes with prostate cancer risk and outcomes

Langeberg, W. J., Kwon, E. M., Koopmeiners, J. S., Ostrander, E. A. & Stanford, J. L., Jan 1 2010, In : Cancer Epidemiology Biomarkers and Prevention. 19, 1, p. 258-264 7 p.

Research output: Contribution to journalArticle

DNA Mismatch Repair
Prostatic Neoplasms
Population
Genes
Single Nucleotide Polymorphism
14 Citations (Scopus)

The effect of age on the tolerability of intraperitoneal chemotherapy, complication rate, and survival in patients with ovarian cancer

Kothari, R., Nagel, C., Koopmeiners, J., Ivy, J. J., Geller, M. A., Salani, R. & Argenta, P. A., Dec 1 2010, In : Gynecologic Oncology. 119, 3, p. 491-495 5 p.

Research output: Contribution to journalArticle

Ovarian Neoplasms
Survival Rate
Drug Therapy
Disease-Free Survival
docetaxel
59 Citations (Scopus)

Vitamin D pathway gene variants and prostate cancer prognosis

Holt, S. K., Kwon, E. M., Koopmeiners, J. S., Lin, D. W., Feng, Z., Ostrander, E. A., Peters, U. & Stanford, J. L., Sep 15 2010, In : Prostate. 70, 13, p. 1448-1460 13 p.

Research output: Contribution to journalArticle

Vitamin D
Prostatic Neoplasms
Single Nucleotide Polymorphism
Calcitriol Receptors
25-Hydroxyvitamin D3 1-alpha-Hydroxylase
2009
53 Citations (Scopus)

Analysis of recently identified prostate cancer susceptibility loci in a population-based study: Associations with family history and clinical features

FitzGerald, L. M., Kwon, E. M., Koopmeiners, J. S., Salinas, C. A., Stanford, J. L. & Ostrander, E. A., May 1 2009, In : Clinical Cancer Research. 15, 9, p. 3231-3237 7 p.

Research output: Contribution to journalArticle

Single Nucleotide Polymorphism
Prostatic Neoplasms
Population
Neoplasm Grading
Genome-Wide Association Study
22 Citations (Scopus)

Association of FGFR4 genetic polymorphisms with prostate cancer risk and prognosis

FitzGerald, L. M., Karlins, E., Karyadi, D. M., Kwon, E. M., Koopmeiners, J. S., Stanford, J. L. & Ostrander, E. A., Jan 1 2009, In : Prostate Cancer and Prostatic Diseases. 12, 2, p. 192-197 6 p.

Research output: Contribution to journalArticle

Receptor, Fibroblast Growth Factor, Type 4
Genetic Polymorphisms
Prostatic Neoplasms
Prostatectomy
Single Nucleotide Polymorphism
69 Citations (Scopus)

Clinical utility of five genetic variants for predicting prostate cancer risk and mortality

Salinas, C. A., Koopmeiners, J. S., Kwon, E. M., FitzGerald, L., Lin, D. W., Ostrander, E. A., Feng, Z. & Stanford, J. L., Mar 1 2009, In : Prostate. 69, 4, p. 363-372 10 p.

Research output: Contribution to journalArticle

Prostatic Neoplasms
Mortality
Single Nucleotide Polymorphism
Genotype
Odds Ratio
21 Citations (Scopus)

Conditional estimation of sensitivity and specificity from a phase 2 biomarker study allowing Early termination for futility

Pepe, M. S., Feng, Z., Longton, G. & Koopmeiners, J., Feb 28 2009, In : Statistics in Medicine. 28, 5, p. 762-779 18 p.

Research output: Contribution to journalArticle

Medical Futility
Early Termination
UMVUE
Biomarkers
Specificity
15 Citations (Scopus)

High ambient glucose augments angiotensin II-induced proinflammatory gene mRNA expression in human mesangial cells: Effects of valsartan and simvastatin

Naito, M., Shenoy, A., Aoyama, I., Koopmeiners, J. S., Komers, R., Schnaper, H. W. & Bomsztyk, K., Aug 1 2009, In : American Journal of Nephrology. 30, 2, p. 99-111 13 p.

Research output: Contribution to journalArticle

Valsartan
Simvastatin
Mesangial Cells
Angiotensin II
Gene Expression
328 Citations (Scopus)

Identification of seven new prostate cancer susceptibility loci through a genome-wide association study

Eeles, R. A., Kote-Jarai, Z., Al Olama, A. A., Giles, G. G., Guy, M., Severi, G., Muir, K., Hopper, J. L., Henderson, B. E., Haiman, C. A., Schleutker, J., Hamdy, F. C., Neal, D. E., Donovan, J. L., Stanford, J. L., Ostrander, E. A., Ingles, S. A., John, E. M., Thibodeau, S. N., Schaid, D. & 81 others, Park, J. Y., Spurdle, A., Clements, J., Dickinson, J. L., Maier, C., Vogel, W., Dörk, T., Rebbeck, T. R., Cooney, K. A., Cannon-Albright, L., Chappuis, P. O., Hutter, P., Zeegers, M., Kaneva, R., Zhang, H. W., Lu, Y. J., Foulkes, W. D., English, D. R., Leongamornlert, D. A., Tymrakiewicz, M., Morrison, J., Ardern-Jones, A. T., Hall, A. L., O'Brien, L. T., Wilkinson, R. A., Saunders, E. J., Page, E. C., Sawyer, E. J., Edwards, S. M., Dearnaley, D. P., Horwich, A., Huddart, R. A., Khoo, V. S., Parker, C. C., Van As, N., Woodhouse, C. J., Thompson, A., Christmas, T., Ogden, C., Cooper, C. S., Southey, M. C., Lophatananon, A., Liu, J. F., Kolonel, L. N., Le Marchand, L., Wahlfors, T., Tammela, T. L., Auvinen, A., Lewis, S. J., Cox, A., Fitzgerald, L. M., Koopmeiners, J. S., Karyadi, D. M., Kwon, E. M., Stern, M. C., Corral, R., Joshi, A. D., Shahabi, A., McDonnell, S. K., Sellers, T. A., Pow-Sang, J., Chambers, S., Aitken, J., Gardiner, R. A., Batra, J., Kedda, M. A., Lose, F., Polanowski, A., Patterson, B., Serth, J., Meyer, A., Luedeke, M., Stefflova, K., Ray, A. M., Lange, E. M., Farnham, J., Khan, H., Slavov, C., Mitkova, A., Cao, G. & Easton, D. F., Jan 1 2009, In : Nature Genetics. 41, 10, p. 1116-1121 6 p.

Research output: Contribution to journalArticle

Genome-Wide Association Study
Prostatic Neoplasms
Single Nucleotide Polymorphism
Chromosomes, Human, Pair 4
Chromosomes, Human, Pair 2
86 Citations (Scopus)

Prostate Cancer Specific Mortality and Gleason 7 Disease Differences in Prostate Cancer Outcomes Between Cases With Gleason 4 + 3 and Gleason 3 + 4 Tumors in a Population Based Cohort

Wright, J. L., Salinas, C. A., Lin, D. W., Kolb, S., Koopmeiners, J., Feng, Z. & Stanford, J. L., Dec 1 2009, In : Journal of Urology. 182, 6, p. 2702-2707 6 p.

Research output: Contribution to journalArticle

Prostatic Neoplasms
Mortality
Population
Neoplasms
Recurrence
51 Citations (Scopus)

The association of cyclic parenteral nutrition and decreased incidence of cholestatic liver disease in patients with gastroschisis

Jensen, A. R., Goldin, A. B., Koopmeiners, J., Stevens, J., Waldhausen, J. H. T. & Kim, S. S., Jan 1 2009, In : Journal of Pediatric Surgery. 44, 1, p. 183-189 7 p.

Research output: Contribution to journalArticle

Gastroschisis
Hyperbilirubinemia
Parenteral Nutrition
Liver Diseases
Incidence
2008
56 Citations (Scopus)

Multiple independent genetic variants in the 8q24 region are associated with prostate cancer risk

Salinas, C. A., Kwon, E., Carlson, C. S., Koopmeiners, J. S., Feng, Z., Karyadi, D. M., Ostrander, E. A. & Stanford, J. L., May 1 2008, In : Cancer Epidemiology Biomarkers and Prevention. 17, 5, p. 1203-1213 11 p.

Research output: Contribution to journalArticle

Single Nucleotide Polymorphism
Prostatic Neoplasms
African Americans
Alleles
Odds Ratio
121 Citations (Scopus)

Multiple novel prostate cancer predisposition loci confirmed by an international study: The PRACTICAL consortium

Kote-Jarai, Z., Easton, D. F., Stanford, J. L., Ostrander, E. A., Schleutker, J., Ingles, S. A., Schaid, D., Thibodeau, S., Dörk, T., Neal, D., Cox, A., Maier, C., Vogel, W., Guy, M., Muir, K., Lophatananon, A., Kedda, M. A., Spurdle, A., Steginga, S., John, E. M. & 31 others, Giles, G., Hopper, J., Chappuis, P. O., Hutter, P., Foulkes, W. D., Hamel, N., Salinas, C. A., Koopmeiners, J. S., Karyadi, D. M., Johanneson, B., Wahlfors, T., Tammela, T. L., Stern, M. C., Corral, R., McDonnell, S. K., Schürmann, P., Meyer, A., Kuefer, R., Leongamornlert, D. A., Tymrakiewicz, M., Liu, J. F., O'Mara, T., Gardiner, R. A., Aitken, J., Joshi, A. D., Severi, G., English, D. R., Southey, M., Edwards, S. M., Al Olama, A. A. & Eeles, R. A., Aug 1 2008, In : Cancer Epidemiology Biomarkers and Prevention. 17, 8, p. 2052-2061 10 p.

Research output: Contribution to journalArticle

Prostatic Neoplasms
Single Nucleotide Polymorphism
Odds Ratio
Confidence Intervals
Chromosomes, Human, Pair 6
2007

Modeling and detecting potentially ruinous streaks in health expenditures

Koopmeiners, J., Dowd, B. E. & Carlin, B. P., Mar 1 2007, In : International journal of health care finance and economics. 7, 1, p. 23-42 20 p.

Research output: Contribution to journalArticle

Health Expenditures
expenditures
Costs and Cost Analysis
costs
health
2006
43 Citations (Scopus)
Glucuronides
Smoke
Tobacco
Urine
Cotinine
50 Citations (Scopus)
Exanthema
Non-Small Cell Lung Carcinoma
Histology
Therapeutics
Disease Progression
2005
112 Citations (Scopus)

An alternative formula to the cockcroft-gault and the modification of diet in renal diseases formulas in predicting GFR in individuals with type 1 diabetes

Ibrahim, H. N., Mondress, M., Tello, A., Fan, Y., Koopmeiners, J. & Thomas, W., Dec 8 2005, In : Journal of the American Society of Nephrology. 16, 4, p. 1051-1060 10 p.

Research output: Contribution to journalArticle

Diet Therapy
Type 1 Diabetes Mellitus
Kidney
Iothalamic Acid
Diabetes Complications
154 Citations (Scopus)

Safety and immunogenicity of a nicotine conjugate vaccine in current smokers

Hatsukami, D. K., Rennard, S., Jorenby, D., Fiore, M., Koopmeiners, J., De Vos, A., Horwith, G. & Pentel, P. R., Jan 1 2005, In : Clinical pharmacology and therapeutics. 78, 5, p. 456-467 12 p.

Research output: Contribution to journalArticle

Conjugate Vaccines
Nicotine
Safety
Vaccines
Smoking