Research Output 1995 2016

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Article
2016
3 Citations

Contrasting potato foliage and tuber defense mechanisms against the late blight pathogen Phytophthora infestans

Gao, L. & Bradeen, J. M. Jul 1 2016 In : PLoS One. 11, 7, e0159969

Research output: Contribution to journalArticle

Phytophthora infestans
Solanum tuberosum
RNA
Genes
Gene Ontology
4 Citations

Reinventing potato as a diploid inbred line-based crop

Jansky, S. H. , Charkowski, A. O. , Douches, D. S. , Gusmini, G. , Richael, C. , Bethke, P. C. , Spooner, D. M. , Novy, R. G. , De Jong, H. , De Jong, W. S. , Bamberg, J. B. , Thompson, A. L. , Bizimungu, B. , Holm, D. G. , Brown, C. R. , Haynes, K. G. , Sathuvalli, V. R. , Veilleux, R. E. , Creighton Miller, J. , Bradeen, J. M. & 1 others Jiang, J. Jul 1 2016 In : Crop Science. 56, 4, p. 1412-1422 11 p.

Research output: Contribution to journalArticle

potatoes
inbred lines
tetraploidy
diploidy
breeding
2015
2 Citations
Plant DNA
Endophytes
Metagenomics
Polymerase Chain Reaction
18 Citations

Plant community richness and microbial interactions structure bacterial communities in soil

Schlatter, D. C., Bakker, M. G., Bradeen, J. M. & Kinkel, L. L. Jan 1 2015 In : Ecology. 96, 1, p. 134-142 9 p.

Research output: Contribution to journalArticle

plant communities
soil
soil bacteria
plant community
community composition
2 Citations

Potato tuber blight resistance phenotypes correlate with RB transgene transcript levels in an age-dependent manner

Millett, B. P., Gao, L., Iorizzo, M., Carputo, D. & Bradeen, J. M. Aug 1 2015 In : Phytopathology. 105, 8, p. 1131-1136 6 p.

Research output: Contribution to journalArticle

tubers
Phytophthora infestans
transgenes
pathogens
leaves
4 Citations

Pushing the boundaries of resistance: Insights from brachypodium-rust interactions

Figueroa, M., Castell-Miller, C. V., Li, F., Hulbert, S. H. & Bradeen, J. M. Jul 30 2015 In : Frontiers in Plant Science. 6, JULY, A558

Research output: Contribution to journalArticle

Brachypodium distachyon
grasses
fungi
Brachypodium
pathogens
19 Citations

The Solanum commersonii genome sequence provides insights into adaptation to stress conditions and genome evolution of wild potato relatives

Aversano, R., Contaldi, F., Ercolano, M. R., Grosso, V., Iorizzo, M., Tatino, F., Xumerle, L., Molin, A. D., Avanzato, C., Ferrarini, A., Delledonne, M., Sanseverino, W., Cigliano, R. A., Capella-Gutierrez, S., Gabaldón, T., Frusciante, L., Bradeen, J. M. & Carputo, D. Apr 1 2015 In : Plant Cell. 27, 4, p. 954-968 15 p.

Research output: Contribution to journalArticle

Solanum
Solanum tuberosum
Genome
genome
genes
2014
10 Citations

A consensus 'Honeycrisp' apple (Malus × domestica) genetic linkage map from three full-sib progeny populations

Clark, M. D., Schmitz, C. A., Rosyara, U. R., Luby, J. J. & Bradeen, J. M. 2014 In : Tree Genetics and Genomes. 10, 3, p. 627-639 13 p.

Research output: Contribution to journalArticle

single nucleotide polymorphism
Genetic Linkage
Malus
Single Nucleotide Polymorphism
chromosome mapping
1 Citations

A DArT marker-based linkage map for wild potato Solanum bulbocastanum facilitates structural comparisons between SolanumA and B genomes

Iorizzo, M., Gao, L., Mann, H., Traini, A., Chiusano, M. L., Kilian, A., Aversano, R., Carputo, D. & Bradeen, J. M. Dec 1 2014 In : BMC Genetics. 15, 123

Research output: Contribution to journalArticle

Solanum
Solanum tuberosum
Genome
2 Citations
Venturia inaequalis
apples
pathogens
frostbite
grandparents
2 Citations
soil
bacterial communities
Andropogon gerardii
soil bacteria
plant communities
2013
21 Citations

Effects of plant host species and plant community richness on streptomycete community structure

Bakker, M. G., Bradeen, J. M. & Kinkel, L. L. Mar 2013 In : FEMS Microbiology Ecology. 83, 3, p. 596-606 11 p.

Research output: Contribution to journalArticle

soil
host plant
Soil
plant community
community structure
3 Citations

Fruit texture phenotypes of the RosBREED U.S. apple reference germplasm set

Schmitz, C. A., Clark, M. D., Luby, J. J., Bradeen, J. M., Guan, Y., Evans, K., Orcheski, B., Brown, S., Verma, S. & Peace, C. Mar 2013 In : HortScience. 48, 3, p. 296-303 8 p.

Research output: Contribution to journalArticle

germplasm
texture
apples
fruits
hardness
7 Citations

Genome microscale heterogeneity among wild potatoes revealed by diversity arrays technology marker sequences

Traini, A., Iorizzo, M., Mann, H., Bradeen, J. M., Carputo, D., Frusciante, L. & Chiusano, M. L. 2013 In : International Journal of Genomics. 2013, 257218

Research output: Contribution to journalArticle

Solanum tuberosum
Genome
Technology
Cyclic AMP Receptor Protein
Acyclic Acids
35 Citations

Insights into organ-specific pathogen defense responses in plants: RNA-seq analysis of potato tuber-Phytophthora infestans interactions

Gao, L., Tu, Z. J., Millett, B. P. & Bradeen, J. M. May 23 2013 In : BMC Genomics. 14, 1, 340

Research output: Contribution to journalArticle

Phytophthora infestans
Plant RNA
Solanum tuberosum
Genes
Transcriptome
35 Citations

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals important Solanum R locus dynamics

Andolfo, G., Sanseverino, W., Rombauts, S., Van de Peer, Y., Bradeen, J. M., Carputo, D., Frusciante, L. & Ercolano, M. R. Jan 2013 In : New Phytologist. 197, 1, p. 223-237 15 p.

Research output: Contribution to journalArticle

Solanum
Lycopersicon esculentum
Genes
genes
pathogens
18 Citations
Streptomyces
Soil
soil
plant communities
plant community
11 Citations

Rhizosphere bacterial communities associated with long-lived perennial prairie plants vary in diversity, composition, and structure

Rosenzweig, N., Bradeen, J. M., Tu, Z. J., McKay, S. J. & Kinkel, L. L. 2013 In : Canadian Journal of Microbiology. 59, 7, p. 494-502 9 p.

Research output: Contribution to journalArticle

Rhizosphere
Grassland
Lespedeza
Ecosystem
Andropogon
2012
9 Citations

Evolutionary meta-analysis of solanaceous resistance gene and solanum resistance gene analog sequences and a practical framework for cross-species comparisons

Quirin, E. A., Mann, H., Meyer, R. S., Traini, A., Chiusano, M. L., Litt, A. & Bradeen, J. M. May 2012 In : Molecular Plant-Microbe Interactions. 25, 5, p. 603-612 10 p.

Research output: Contribution to journalArticle

Solanum
Meta-Analysis
Genes
genes
Solanum tuberosum

Fertilization fitness and offspring ploidy in 3x × 2x matings in potato

Iorizzo, M., Aversano, R., Bradeen, J. M., Frusciante, L. & Carputo, D. Jun 2012 In : Plant Biosystems. 146, 2, p. 317-321 5 p.

Research output: Contribution to journalArticle

gamete
potato
chromosome
fitness
triploidy
14 Citations

Implications of Pyrosequencing Error Correction for Biological Data Interpretation

Bakker, M. G., Tu, Z. J., Bradeen, J. M. & Kinkel, L. L. Aug 30 2012 In : PLoS One. 7, 8, e44357

Research output: Contribution to journalArticle

Accessory Nerve
sampling
methodology
Argininosuccinic Acid
Artificial Cardiac Pacing
2011
2 Citations
Solanum bulbocastanum
haplotypes
potatoes
genotype
mismatch amplification mutation assay
65 Citations

Apple skin patterning is associated with differential expression of MYb10

Telias, A., Lin-Wang, K., Stevenson, D. E., Cooney, J. M., Hellens, R. P., Allan, A. C., Hoover, E. E. & Bradeen, J. M. May 20 2011 In : BMC Plant Biology. 11, 93

Research output: Contribution to journalArticle

methylation
apples
promoter regions
anthocyanins
fruits
4 Citations

Disease resistance gene transcription in transgenic potato is unaltered by temperature extremes and plant physiological age

Iorizzo, M., Mollov, D. S., Carputo, D. & Bradeen, J. M. Aug 2011 In : European Journal of Plant Pathology. 130, 4, p. 469-476 8 p.

Research output: Contribution to journalArticle

genes
disease resistance
temperature
plant development
genetically modified organisms
6 Citations
apples
fruits
Malus
Breeding
Fruit
2010

Caracterización de poblaciones de phytophthora infestans (mont, de bary) obtenidas de solanum transgénicas y de híbridos somáticos resistentes

Lozoya-Saldaña, H., Belmar-Díaz, C. R., Bradeen, J. M. & Helgeson, J. P. Oct 2010 In : Interciencia. 35, 10, p. 784-788 5 p.

Research output: Contribution to journalArticle

Phytophthora infestans
clones
genotype
infection
glucose-6-phosphate isomerase
17 Citations

Common scab trials of potato varieties and advanced selections at three U.S. locations

Haynes, K. G., Wanner, L. A., Thill, C. A., Bradeen, J. M., Miller, J., Novy, R. G., Whitworth, J. L., Corsini, D. L. & Vinyard, B. T. 2010 In : American Journal of Potato Research. 87, 3, p. 261-276 16 p.

Research output: Contribution to journalArticle

tubers
potatoes
clones
germplasm
heritability
19 Citations

Rdr3, a novel locus conferring black spot disease resistance in tetraploid rose: Genetic analysis, LRR profiling, and SCAR marker development

Whitaker, V. M., Bradeen, J. M., Debener, T., Biber, A. & Hokanson, S. C. Jan 2010 In : Theoretical And Applied Genetics. 120, 3, p. 573-585 13 p.

Research output: Contribution to journalArticle

Disease Resistance
Tetraploidy
Rosa
loci
Genes
2009
15 Citations

Changes in disease resistance phenotypes associated with plant physiological age are not caused by variation in R gene transcript abundance

Millett, B. P., Mollov, D. S., Iorizzo, M., Carputo, D. & Bradeen, J. M. Mar 2009 In : Molecular Plant-Microbe Interactions. 22, 3, p. 362-368 7 p.

Research output: Contribution to journalArticle

Disease Resistance
Phenotype
disease resistance
genes
plant age
48 Citations

Higher copy numbers of the potato RB transgene correspond to enhanced transcript and late blight resistance levels

Bradeen, J. M., Iorizzo, M., Mollov, D. S., Raasch, J., Kramer, L. C., Millett, B. P., Austin-Phillips, S., Jiang, J. & Carputo, D. Apr 2009 In : Molecular Plant-Microbe Interactions. 22, 4, p. 437-446 10 p.

Research output: Contribution to journalArticle

potatoes
Solanum tuberosum
Transgenes
transgenes
genes
22 Citations

The fractionated orthology of Bs2 and Rx/Gpa2 supports shared synteny of disease resistance in the solanaceae

Mazourek, M., Cirulli, E. T., Collier, S. M., Landry, L. G., Kang, B. C., Quirin, E. A., Bradeen, J. M., Moffett, P. & Jahn, M. M. Aug 2009 In : Genetics. 182, 4, p. 1351-1364 14 p.

Research output: Contribution to journalArticle

Solanaceae
Synteny
Disease Resistance
Leucine
Nucleotides
2007
2 Citations

Culturing and long-term storage of virulent races of the rose blackspot pathogen, diplocarpon rosae wolf

Whitaker, V. M., Zuzek, K., Hokanson, S. C. & Bradeen, J. M. 2007 In : Acta Horticulturae. 751, p. 199-206 8 p.

Research output: Contribution to journalArticle

Rosa
leaves
Diplocarpon rosae
agar
potatoes
17 Citations
Solanum tuberosum
Transgenes
Alleles
Polymerase Chain Reaction
Genes
10 Citations
Rosa
Diplocarpon rosae
Cluster Analysis
screening
Spores
potatoes
linuron
herbicides
metribuzin
seedlings
4 Citations

Resistance traits and AFLP characterization of diploid primitive tuber-bearing potatoes

Aversano, R., Ercolano, M. R., Frusciante, L., Monti, L., Bradeen, J. M., Cristinzio, G., Zoina, A., Greco, N., Vitale, S. & Carputo, D. Dec 2007 In : Genetic Resources and Crop Evolution. 54, 8, p. 1797-1806 10 p.

Research output: Contribution to journalArticle

potatoes
Solanum tuberosum
Diploidy
potato
amplified fragment length polymorphism
2006
8 Citations

Towards efficient isolation of R gene orthologs from multiple genotypes: Optimization of Long Range-PCR

Sanchez, M. J. & Bradeen, J. M. Feb 2006 In : Molecular Breeding. 17, 2, p. 137-148 12 p.

Research output: Contribution to journalArticle

Genotype
Polymerase Chain Reaction
genes
Cyclic AMP Receptor Protein
Alleles
2003
35 Citations

BIBAC and TAC clones containing potato genomic DNA fragments larger than 100 kb are not stable in Agrobacterium

Song, J., Bradeen, J. M., Naess, S. K., Helgeson, J. P. & Jiang, J. Sep 1 2003 In : Theoretical And Applied Genetics. 107, 5, p. 958-964 7 p.

Research output: Contribution to journalArticle

Agrobacterium
Solanum tuberosum
Clone Cells
DNA
potatoes
17 Citations

Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB

Bradeen, J. M., Naess, S. K., Song, J., Haberlach, G. T., Wielgus, S. M., Buell, C. R., Jiang, J. & Helgeson, J. P. Aug 1 2003 In : Molecular Genetics and Genomics. 269, 5, p. 603-611 9 p.

Research output: Contribution to journalArticle

Physical Chromosome Mapping
Walking
Polymerase Chain Reaction
Clone Cells
Contig Mapping
339 Citations

Gene RB cloned from Solanum bulbocastanum confers broad spectrum resistance to potato late blight

Song, J., Bradeen, J. M., Naess, S. K., Raasch, J. A., Wielgus, S. M., Haberlach, G. T., Liu, J., Kuang, H., Austin-Phillips, S., Buell, C. R., Helgeson, J. P. & Jiang, J. Aug 5 2003 In : Proceedings of the National Academy of Sciences of the United States of America. 100, 16, p. 9128-9133 6 p.

Research output: Contribution to journalArticle

Solanum
Solanum tuberosum
Genes
Polymerase Chain Reaction
Phytophthora infestans
2002
42 Citations

Molecular diversity analysis of cultivated carrot (Daucus carota L.) and wild Daucus populations reveals a genetically nonstructured composition

Bradeen, J. M., Bach, I. C., Briard, M., Le Clerc, V., Grzebelus, D., Senalik, D. A. & Simon, P. W. 2002 In : Journal of the American Society for Horticultural Science. 127, 3, p. 383-391 9 p.

Research output: Contribution to journalArticle

carrots
Daucus carota
topology
amplified fragment length polymorphism
microsatellite repeats
2001
32 Citations

Analysis of the introgression of Solanum bulbocastanum DNA into potato breeding lines

Naess, S., Bradeen, J., Wielgus, S., Haberlach, G., McGrath, J. & Helgeson, J. 2001 In : Molecular Genetics and Genomics. 265, 4, p. 694-704 11 p.

Research output: Contribution to journalArticle

Solanum
Solanum tuberosum
Restriction Fragment Length Polymorphisms
Breeding
DNA
60 Citations

Towards an expanded and integrated linkage map of cucumber (Cucumis Sativus L.)

Bradeen, J. M., Staub, J. E., Wye, C., Antonise, R. & Peleman, J. 2001 In : Genome. 44, 1, p. 111-119 9 p.

Research output: Contribution to journalArticle

Cucumis sativus
cucumbers
chromosome mapping
amplified fragment length polymorphism
isozymes
2000
96 Citations

Resistance to late blight in Solanum bulbocastanum is mapped to chromosome 8

Naess, S. K., Bradeen, J. M., Wielgus, S. M., Haberlach, G. T., McGrath, J. M. & Helgeson, J. P. 2000 In : Theoretical And Applied Genetics. 101, 5-6, p. 697-704 8 p.

Research output: Contribution to journalArticle

Solanum
Chromosomes, Human, Pair 8
Restriction Fragment Length Polymorphisms
Phytophthora infestans
Solanum bulbocastanum
1998
95 Citations

A low-density genetic map of onion reveals a role for tandem duplication in the evolution of an extremely large diploid genome

King, J. J., Bradeen, J. M., Bark, O., McCallum, J. A. & Havey, M. J. Jan 1998 In : Theoretical And Applied Genetics. 96, 1, p. 52-62 11 p.

Research output: Contribution to journalArticle

restriction fragment length polymorphism
Onions
Diploidy
Restriction Fragment Length Polymorphisms
Genome
96 Citations

Conversion of an AFLP fragment linked to the carrot Y2 locus to a simple, codominant, PCR-based marker form

Bradeen, J. M. & Simon, P. W. Oct 1998 In : Theoretical And Applied Genetics. 97, 5-6, p. 960-967 8 p.

Research output: Contribution to journalArticle

Daucus carota
Carotenoids
Polymerase Chain Reaction
amplified fragment length polymorphism
loci
10 Citations
Onions
Restriction Fragment Length Polymorphisms
restriction fragment length polymorphism
onions
Clone Cells
1997
3 Citations

Detailed genetic mapping of the Y2 carotenoid locus in carrot

Bradeen, J. M., Vivek, B. S. & Simon, P. W. 1997 In : Journal of Applied Genetics. 38 A, p. 28-32 5 p.

Research output: Contribution to journalArticle

Daucus carota
Carotenoids
Alleles
Polymerase Chain Reaction
Hereditary Corneal Dystrophies
11 Citations

Dynamic genome organization and gene evolution by positive selection in geminivirus (Geminiviridae)

Bradeen, J. M., Timmermans, M. C. P. & Messing, J. 1997 In : Molecular Biology and Evolution. 14, 11, p. 1114-1124 11 p.

Research output: Contribution to journalArticle

Geminiviridae
Genome
Genes
genome
Cyclic AMP Receptor Protein
17 Citations

Region-specific cis- and trans-acting factors contribute to genetic variability in meiotic recombination in maize

Timmermans, M. C. P., Das, O. P., Bradeen, J. M. & Messing, J. 1997 In : Genetics. 146, 3, p. 1101-1113 13 p.

Research output: Contribution to journalArticle

Trans-Activators
Genetic Recombination
Zea mays
Chromosomes, Human, Pair 5
Chromosomes, Human, Pair 7