Research Output 1995 2018

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2018

An evaluation of two seedling phenotyping protocols to assess pH adaptability in deciduous Azalea (Rhododendron sect. Pentanthera G. Don)

Susko, A. Q., Rinehart, T. A., Bradeen, J. M. & Hokanson, S. C. Mar 1 2018 In : HortScience. 53, 3, p. 268-274 7 p.

Research output: Contribution to journalArticle

Rhododendron
ornamental woody plants
phenotype
seedlings
breeding
2016
3 Citations

Contrasting potato foliage and tuber defense mechanisms against the late blight pathogen Phytophthora infestans

Gao, L. & Bradeen, J. M. Jul 1 2016 In : PLoS ONE. 11, 7, e0159969

Research output: Contribution to journalArticle

Phytophthora infestans
Pathogens
Solanum tuberosum
defense mechanisms
tubers
12 Citations

Reinventing potato as a diploid inbred line-based crop

Jansky, S. H. , Charkowski, A. O. , Douches, D. S. , Gusmini, G. , Richael, C. , Bethke, P. C. , Spooner, D. M. , Novy, R. G. , De Jong, H. , De Jong, W. S. , Bamberg, J. B. , Thompson, A. L. , Bizimungu, B. , Holm, D. G. , Brown, C. R. , Haynes, K. G. , Sathuvalli, V. R. , Veilleux, R. E. , Creighton Miller, J. , Bradeen, J. M. & 1 others Jiang, J. Jul 1 2016 In : Crop Science. 56, 4, p. 1412-1422 11 p.

Research output: Contribution to journalArticle

inbred lines
diploidy
potatoes
crops
tetraploidy

Towards Broader Adaptability of North American Deciduous Azaleas

Susko, A., Bradeen, J. M. & Hokanson, S. C. 2016 In : Arnoldia. 74, p. 15-27

Research output: Contribution to journalArticle

2015
3 Citations
Plant DNA
Endophytes
Metagenomics
Polymerase Chain Reaction
32 Citations

Plant community richness and microbial interactions structure bacterial communities in soil

Schlatter, D. C., Bakker, M. G., Bradeen, J. M. & Kinkel, L. L. Jan 1 2015 In : Ecology. 96, 1, p. 134-142 9 p.

Research output: Contribution to journalArticle

soil bacteria
plant community
plant communities
soil
community composition
2 Citations

Potato tuber blight resistance phenotypes correlate with RB transgene transcript levels in an age-dependent manner

Millett, B. P., Gao, L., Iorizzo, M., Carputo, D. & Bradeen, J. M. Jan 1 2015 In : Phytopathology. 105, 8, p. 1131-1136 6 p.

Research output: Contribution to journalArticle

blight
transgenes
Phytophthora infestans
tubers
potatoes
5 Citations

Pushing the boundaries of resistance: Insights from brachypodium-rust interactions

Figueroa, M., Castell-Miller, C. V., Li, F., Hulbert, S. H. & Bradeen, J. M. Jul 30 2015 In : Frontiers in Plant Science. 6, JULY, 558

Research output: Contribution to journalArticle

Brachypodium distachyon
Brachypodium
grasses
fungi
food defense
30 Citations

The Solanum commersonii genome sequence provides insights into adaptation to stress conditions and genome evolution of wild potato relatives

Aversano, R., Contaldi, F., Ercolano, M. R., Grosso, V., Iorizzo, M., Tatino, F., Xumerle, L., Molin, A. D., Avanzato, C., Ferrarini, A., Delledonne, M., Sanseverino, W., Cigliano, R. A., Capella-Gutierrez, S., Gabaldón, T., Frusciante, L., Bradeen, J. M. & Carputo, D. Jan 1 2015 In : Plant Cell. 27, 4, p. 954-968 15 p.

Research output: Contribution to journalArticle

Solanum commersonii
Solanum
Solanum tuberosum
potatoes
Genome
2014
13 Citations

A consensus 'Honeycrisp' apple (Malus × domestica) genetic linkage map from three full-sib progeny populations

Clark, M. D., Schmitz, C. A., Rosyara, U. R., Luby, J. J. & Bradeen, J. M. Jan 1 2014 In : Tree Genetics and Genomes. 10, 3, p. 627-639 13 p.

Research output: Contribution to journalArticle

Open Access
Genetic Linkage
Malus
Malus domestica
single nucleotide polymorphism
chromosome mapping
3 Citations

A DArT marker-based linkage map for wild potato Solanum bulbocastanum facilitates structural comparisons between SolanumA and B genomes

Iorizzo, M., Gao, L., Mann, H., Traini, A., Chiusano, M. L., Kilian, A., Aversano, R., Carputo, D. & Bradeen, J. M. Dec 1 2014 In : BMC Genetics. 15, 123

Research output: Contribution to journalArticle

3 Citations
Venturia inaequalis
frostbite
ancestry
apples
grandparents
2 Citations
soil bacteria
community structure
grass
grasses
greenhouses
2013
22 Citations

Effects of plant host species and plant community richness on streptomycete community structure

Bakker, M. G., Bradeen, J. M. & Kinkel, L. L. Mar 1 2013 In : FEMS Microbiology Ecology. 83, 3, p. 596-606 11 p.

Research output: Contribution to journalArticle

host plant
plant community
community structure
Soil
soil
5 Citations

Fruit texture phenotypes of the RosBREED U.S. apple reference germplasm set

Schmitz, C. A., Clark, M. D., Luby, J. J., Bradeen, J. M., Guan, Y., Evans, K., Orcheski, B., Brown, S., Verma, S. & Peace, C. Mar 1 2013 In : HortScience. 48, 3, p. 296-303 8 p.

Research output: Contribution to journalArticle

germplasm
apples
texture
phenotype
fruits
7 Citations

Genome microscale heterogeneity among wild potatoes revealed by diversity arrays technology marker sequences

Traini, A., Iorizzo, M., Mann, H., Bradeen, J. M., Carputo, D., Frusciante, L. & Chiusano, M. L. Jun 12 2013 In : International Journal of Genomics. 2013, 257218

Research output: Contribution to journalArticle

Solanum tuberosum
Genes
Genome
Technology
Gene Regulatory Networks
44 Citations

Insights into organ-specific pathogen defense responses in plants: RNA-seq analysis of potato tuber-Phytophthora infestans interactions

Gao, L., Tu, Z. J., Millett, B. P. & Bradeen, J. M. May 23 2013 In : BMC Genomics. 14, 1, 340

Research output: Contribution to journalArticle

Phytophthora infestans
Plant RNA
Solanum tuberosum
Transcriptome
Gene Ontology
38 Citations

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals important Solanum R locus dynamics

Andolfo, G., Sanseverino, W., Rombauts, S., Van de Peer, Y., Bradeen, J. M., Carputo, D., Frusciante, L. & Ercolano, M. R. Jan 1 2013 In : New Phytologist. 197, 1, p. 223-237 15 p.

Research output: Contribution to journalArticle

Solanum
Solanum lycopersicum
Lycopersicon esculentum
tomatoes
loci
23 Citations

Plant monocultures produce more antagonistic soil Streptomyces communities than high-diversity plant communities

Bakker, M. G., Otto-Hanson, L., Lange, A. J., Bradeen, J. M. & Kinkel, L. L. Oct 1 2013 In : Soil Biology and Biochemistry. 65, p. 304-312 9 p.

Research output: Contribution to journalArticle

Streptomyces
monoculture
plant community
plant communities
Soil
13 Citations

Rhizosphere bacterial communities associated with long-lived perennial prairie plants vary in diversity, composition, and structure

Rosenzweig, N., Bradeen, J. M., Tu, Z. J., McKay, S. J. & Kinkel, L. L. Jul 15 2013 In : Canadian Journal of Microbiology. 59, 7, p. 494-502 9 p.

Research output: Contribution to journalArticle

Rhizosphere
Lespedeza
Ecosystem
Andropogon
Trace Elements
2012
12 Citations

Evolutionary meta-analysis of solanaceous resistance gene and solanum resistance gene analog sequences and a practical framework for cross-species comparisons

Quirin, E. A., Mann, H., Meyer, R. S., Traini, A., Chiusano, M. L., Litt, A. & Bradeen, J. M. May 1 2012 In : Molecular Plant-Microbe Interactions. 25, 5, p. 603-612 10 p.

Research output: Contribution to journalArticle

vpr Genes
Solanum
meta-analysis
Meta-Analysis
Genes
1 Citations

Fertilization fitness and offspring ploidy in 3x × 2x matings in potato

Iorizzo, M., Aversano, R., Bradeen, J. M., Frusciante, L. & Carputo, D. Jun 1 2012 In : Plant Biosystems. 146, 2, p. 317-321 5 p.

Research output: Contribution to journalArticle

ploidy
gamete
fertilization (reproduction)
triploidy
potato
15 Citations

Implications of Pyrosequencing Error Correction for Biological Data Interpretation

Bakker, M. G., Tu, Z. J., Bradeen, J. M. & Kinkel, L. L. Aug 30 2012 In : PLoS ONE. 7, 8, e44357

Research output: Contribution to journalArticle

Otus
Error correction
Processing
Pipelines
sampling
2011
2 Citations
Solanum bulbocastanum
Solanum
haplotypes
potatoes
chromosome mapping
76 Citations

Apple skin patterning is associated with differential expression of MYb10

Telias, A., Lin-Wang, K., Stevenson, D. E., Cooney, J. M., Hellens, R. P., Allan, A. C., Hoover, E. E. & Bradeen, J. M. May 20 2011 In : BMC Plant Biology. 11, 93

Research output: Contribution to journalArticle

methylation
apples
promoter regions
anthocyanins
fruits
5 Citations

Disease resistance gene transcription in transgenic potato is unaltered by temperature extremes and plant physiological age

Iorizzo, M., Mollov, D. S., Carputo, D. & Bradeen, J. M. Aug 1 2011 In : European Journal of Plant Pathology. 130, 4, p. 469-476 8 p.

Research output: Contribution to journalArticle

disease resistance
transcription (genetics)
genetically modified organisms
potatoes
plant development
9 Citations
juiciness
Malus
Breeding
Fruit
heritability
2010

Caracterización de poblaciones de phytophthora infestans (mont, de bary) obtenidas de solanum transgénicas y de híbridos somáticos resistentes

Lozoya-Saldaña, H., Belmar-Díaz, C. R., Bradeen, J. M. & Helgeson, J. P. Oct 1 2010 In : Interciencia. 35, 10, p. 784-788 5 p.

Research output: Contribution to journalArticle

Phytophthora infestans
Solanum
genetically modified organisms
clones
glucose-6-phosphate isomerase
19 Citations

Common scab trials of potato varieties and advanced selections at three U.S. locations

Haynes, K. G., Wanner, L. A., Thill, C. A., Bradeen, J. M., Miller, J., Novy, R. G., Whitworth, J. L., Corsini, D. L. & Vinyard, B. T. Apr 23 2010 In : American Journal of Potato Research. 87, 3, p. 261-276 16 p.

Research output: Contribution to journalArticle

tubers
potatoes
clones
germplasm
heritability
21 Citations

Rdr3, a novel locus conferring black spot disease resistance in tetraploid rose: Genetic analysis, LRR profiling, and SCAR marker development

Whitaker, V. M., Bradeen, J. M., Debener, T., Biber, A. & Hokanson, S. C. Jan 1 2010 In : Theoretical and Applied Genetics. 120, 3, p. 573-585 13 p.

Research output: Contribution to journalArticle

Disease Resistance
Tetraploidy
tetraploidy
disease resistance
genetic techniques and protocols
2009
17 Citations

Changes in disease resistance phenotypes associated with plant physiological age are not caused by variation in R gene transcript abundance

Millett, B. P., Mollov, D. S., Iorizzo, M., Carputo, D. & Bradeen, J. M. Mar 1 2009 In : Molecular Plant-Microbe Interactions. 22, 3, p. 362-368 7 p.

Research output: Contribution to journalArticle

vpr Genes
Disease Resistance
disease resistance
plant age
Phenotype
54 Citations

Higher copy numbers of the potato RB transgene correspond to enhanced transcript and late blight resistance levels

Bradeen, J. M., Iorizzo, M., Mollov, D. S., Raasch, J., Kramer, L. C., Millett, B. P., Austin-Phillips, S., Jiang, J. & Carputo, D. Apr 1 2009 In : Molecular Plant-Microbe Interactions. 22, 4, p. 437-446 10 p.

Research output: Contribution to journalArticle

Phytophthora infestans
Solanum tuberosum
Transgenes
transgenes
potatoes
22 Citations

The fractionated orthology of Bs2 and Rx/Gpa2 supports shared synteny of disease resistance in the solanaceae

Mazourek, M., Cirulli, E. T., Collier, S. M., Landry, L. G., Kang, B. C., Quirin, E. A., Bradeen, J. M., Moffett, P. & Jahn, M. M. Aug 1 2009 In : Genetics. 182, 4, p. 1351-1364 14 p.

Research output: Contribution to journalArticle

Solanaceae
vpr Genes
Synteny
Disease Resistance
Leucine
2007
2 Citations

Culturing and long-term storage of virulent races of the rose blackspot pathogen, diplocarpon rosae wolf

Whitaker, V. M., Zuzek, K., Hokanson, S. C. & Bradeen, J. M. Dec 1 2007 In : Acta Horticulturae. 751, p. 199-206 8 p.

Research output: Contribution to journalArticle

Diplocarpon rosae
wolves
Rosa
pathogens
agar
17 Citations
Phytophthora infestans
Solanum tuberosum
Transgenes
transgenes
reverse transcriptase polymerase chain reaction
11 Citations
Diplocarpon rosae
North America
amplified fragment length polymorphism
Rosa
screening
herbicide resistance
linuron
diploidy
metribuzin
potatoes
4 Citations

Resistance traits and AFLP characterization of diploid primitive tuber-bearing potatoes

Aversano, R., Ercolano, M. R., Frusciante, L., Monti, L., Bradeen, J. M., Cristinzio, G., Zoina, A., Greco, N., Vitale, S. & Carputo, D. Dec 1 2007 In : Genetic Resources and Crop Evolution. 54, 8, p. 1797-1806 10 p.

Research output: Contribution to journalArticle

Neottia
tuber
Solanum tuberosum
Diploidy
potato
2006
8 Citations

Towards efficient isolation of R gene orthologs from multiple genotypes: Optimization of Long Range-PCR

Sanchez, M. J. & Bradeen, J. M. Feb 1 2006 In : Molecular Breeding. 17, 2, p. 137-148 12 p.

Research output: Contribution to journalArticle

vpr Genes
Genes
Genotype
Polymerase Chain Reaction
genotype
2003
38 Citations

BIBAC and TAC clones containing potato genomic DNA fragments larger than 100 kb are not stable in Agrobacterium

Song, J., Bradeen, J. M., Naess, S. K., Helgeson, J. P. & Jiang, J. Sep 1 2003 In : Theoretical and Applied Genetics. 107, 5, p. 958-964 7 p.

Research output: Contribution to journalArticle

Agrobacterium
Solanum tuberosum
Clone Cells
potatoes
clones
17 Citations

Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB

Bradeen, J. M., Naess, S. K., Song, J., Haberlach, G. T., Wielgus, S. M., Buell, C. R., Jiang, J. & Helgeson, J. P. Aug 1 2003 In : Molecular Genetics and Genomics. 269, 5, p. 603-611 9 p.

Research output: Contribution to journalArticle

Physical Chromosome Mapping
Walking
Polymerase Chain Reaction
Contig Mapping
Clone Cells
361 Citations

Gene RB cloned from Solanum bulbocastanum confers broad spectrum resistance to potato late blight

Song, J., Bradeen, J. M., Naess, S. K., Raasch, J. A., Wielgus, S. M., Haberlach, G. T., Liu, J., Kuang, H., Austin-Phillips, S., Buell, C. R., Helgeson, J. P. & Jiang, J. Aug 5 2003 In : Proceedings of the National Academy of Sciences of the United States of America. 100, 16, p. 9128-9133 6 p.

Research output: Contribution to journalArticle

Solanum
Solanum tuberosum
Phytophthora infestans
Genes
Polymerase Chain Reaction
2002
43 Citations

Molecular diversity analysis of cultivated carrot (Daucus carota L.) and wild Daucus populations reveals a genetically nonstructured composition

Bradeen, J. M., Bach, I. C., Briard, M., Le Clerc, V., Grzebelus, D., Senalik, D. A. & Simon, P. W. Jan 1 2002 In : Journal of the American Society for Horticultural Science. 127, 3, p. 383-391 9 p.

Research output: Contribution to journalArticle

Daucus
Daucus carota
carrots
Population
topology
2001
34 Citations

Analysis of the introgression of Solanum bulbocastanum DNA into potato breeding lines

Naess, S., Bradeen, J., Wielgus, S., Haberlach, G., McGrath, J. & Helgeson, J. Aug 29 2001 In : Molecular Genetics and Genomics. 265, 4, p. 694-704 11 p.

Research output: Contribution to journalArticle

Solanum
Solanum tuberosum
Restriction Fragment Length Polymorphisms
Breeding
Diploidy
62 Citations

Towards an expanded and integrated linkage map of cucumber (Cucumis Sativus L.)

Bradeen, J. M., Staub, J. E., Wye, C., Antonise, R. & Peleman, J. Apr 11 2001 In : Genome. 44, 1, p. 111-119 9 p.

Research output: Contribution to journalArticle

Cucumis sativus
cucumbers
chromosome mapping
random amplified polymorphic DNA technique
amplified fragment length polymorphism
2000
98 Citations

Resistance to late blight in Solanum bulbocastanum is mapped to chromosome 8

Naess, S. K., Bradeen, J. M., Wielgus, S. M., Haberlach, G. T., McGrath, J. M. & Helgeson, J. P. Jan 1 2000 In : Theoretical and Applied Genetics. 101, 5-6, p. 697-704 8 p.

Research output: Contribution to journalArticle

Solanum bulbocastanum
Solanum
Chromosomes, Human, Pair 8
Phytophthora infestans
Restriction Fragment Length Polymorphisms
1998
97 Citations

A low-density genetic map of onion reveals a role for tandem duplication in the evolution of an extremely large diploid genome

King, J. J., Bradeen, J. M., Bark, O., McCallum, J. A. & Havey, M. J. Jan 1 1998 In : Theoretical and Applied Genetics. 96, 1, p. 52-62 11 p.

Research output: Contribution to journalArticle

Onions
Diploidy
Restriction Fragment Length Polymorphisms
onions
restriction fragment length polymorphism
97 Citations

Conversion of an AFLP fragment linked to the carrot Y2 locus to a simple, codominant, PCR-based marker form

Bradeen, J. M. & Simon, P. W. Oct 1 1998 In : Theoretical and Applied Genetics. 97, 5-6, p. 960-967 8 p.

Research output: Contribution to journalArticle

Daucus carota
Carotenoids
carrots
amplified fragment length polymorphism
Polymerase Chain Reaction
10 Citations
Onions
Restriction Fragment Length Polymorphisms
onions
restriction fragment length polymorphism
Population
1997
3 Citations

Detailed genetic mapping of the Y2 carotenoid locus in carrot

Bradeen, J. M., Vivek, B. S. & Simon, P. W. Dec 1 1997 In : Journal of Applied Genetics. 38 A, p. 28-32 5 p.

Research output: Contribution to journalArticle

Daucus carota
Carotenoids
Alleles
Phloem
Xylem