Research Output 1995 2016

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Article
2016
3 Citations

Contrasting potato foliage and tuber defense mechanisms against the late blight pathogen Phytophthora infestans

Gao, L. & Bradeen, J. M. Jul 1 2016 In : PLoS ONE. 11, 7, e0159969

Research output: Research - peer-reviewArticle

Phytophthora infestans
defense mechanisms
tubers
potatoes
pathogens
7 Citations

Reinventing potato as a diploid inbred line-based crop

Jansky, S. H. , Charkowski, A. O. , Douches, D. S. , Gusmini, G. , Richael, C. , Bethke, P. C. , Spooner, D. M. , Novy, R. G. , De Jong, H. , De Jong, W. S. , Bamberg, J. B. , Thompson, A. L. , Bizimungu, B. , Holm, D. G. , Brown, C. R. , Haynes, K. G. , Sathuvalli, V. R. , Veilleux, R. E. , Creighton Miller, J. , Bradeen, J. M. & 1 others Jiang, J. Jul 1 2016 In : Crop Science. 56, 4, p. 1412-1422 11 p.

Research output: Research - peer-reviewArticle

inbred lines
diploidy
potatoes
crops
tetraploidy

Towards Broader Adaptability of North American Deciduous Azaleas

Susko, A., Bradeen, J. M. & Hokanson, S. C. 2016 In : Arnoldia. 74, p. 15-27

Research output: Research - peer-reviewArticle

2015
3 Citations
Plant DNA
Endophytes
Metagenomics
Polymerase Chain Reaction
26 Citations

Plant community richness and microbial interactions structure bacterial communities in soil

Schlatter, D. C., Bakker, M. G., Bradeen, J. M. & Kinkel, L. L. Jan 1 2015 In : Ecology. 96, 1, p. 134-142 9 p.

Research output: Research - peer-reviewArticle

soil bacteria
plant communities
plant community
soil
plant species
2 Citations

Potato tuber blight resistance phenotypes correlate with RB transgene transcript levels in an age-dependent manner

Millett, B. P., Gao, L., Iorizzo, M., Carputo, D. & Bradeen, J. M. Jan 1 2015 In : Phytopathology. 105, 8, p. 1131-1136 6 p.

Research output: Research - peer-reviewArticle

blight
transgenes
tubers
potatoes
phenotype
4 Citations

Pushing the boundaries of resistance: Insights from brachypodium-rust interactions

Figueroa, M., Castell-Miller, C. V., Li, F., Hulbert, S. H. & Bradeen, J. M. Jul 30 2015 In : Frontiers in Plant Science. 6, JULY, A558

Research output: Research - peer-reviewArticle

Brachypodium distachyon
Brachypodium
grasses
fungi
pathogens
22 Citations

The Solanum commersonii genome sequence provides insights into adaptation to stress conditions and genome evolution of wild potato relatives

Aversano, R., Contaldi, F., Ercolano, M. R., Grosso, V., Iorizzo, M., Tatino, F., Xumerle, L., Molin, A. D., Avanzato, C., Ferrarini, A., Delledonne, M., Sanseverino, W., Cigliano, R. A., Capella-Gutierrez, S., Gabaldón, T., Frusciante, L., Bradeen, J. M. & Carputo, D. Jan 1 2015 In : Plant Cell. 27, 4, p. 954-968 15 p.

Research output: Research - peer-reviewArticle

Solanum commersonii
potatoes
genome
genes
Solanum
2014
13 Citations

A consensus 'Honeycrisp' apple (Malus × domestica) genetic linkage map from three full-sib progeny populations

Clark, M. D., Schmitz, C. A., Rosyara, U. R., Luby, J. J. & Bradeen, J. M. Jan 1 2014 In : Tree Genetics and Genomes. 10, 3, p. 627-639 13 p.

Research output: Research - peer-reviewArticle

Malus domestica
single nucleotide polymorphism
chromosome mapping
apples
Genetic Linkage
2 Citations

A DArT marker-based linkage map for wild potato Solanum bulbocastanum facilitates structural comparisons between SolanumA and B genomes

Iorizzo, M., Gao, L., Mann, H., Traini, A., Chiusano, M. L., Kilian, A., Aversano, R., Carputo, D. & Bradeen, J. M. Dec 1 2014 In : BMC Genetics. 15, 123

Research output: Research - peer-reviewArticle

3 Citations
Venturia inaequalis
ancestry
apples
pathogens
frostbite
2 Citations
soil bacteria
community structure
grasses
greenhouses
soil
2013
21 Citations

Effects of plant host species and plant community richness on streptomycete community structure

Bakker, M. G., Bradeen, J. M. & Kinkel, L. L. Mar 1 2013 In : FEMS Microbiology Ecology. 83, 3, p. 596-606 11 p.

Research output: Research - peer-reviewArticle

host plant
plant community
community structure
soil
effect
4 Citations

Fruit texture phenotypes of the RosBREED U.S. apple reference germplasm set

Schmitz, C. A., Clark, M. D., Luby, J. J., Bradeen, J. M., Guan, Y., Evans, K., Orcheski, B., Brown, S., Verma, S. & Peace, C. Mar 1 2013 In : HortScience. 48, 3, p. 296-303 8 p.

Research output: Research - peer-reviewArticle

germplasm
apples
texture
phenotype
fruits
7 Citations

Genome microscale heterogeneity among wild potatoes revealed by diversity arrays technology marker sequences

Traini, A., Iorizzo, M., Mann, H., Bradeen, J. M., Carputo, D., Frusciante, L. & Chiusano, M. L. 2013 In : International Journal of Genomics. 2013, 257218

Research output: Research - peer-reviewArticle

Solanum tuberosum
Genome
Technology
Genes
Gene Regulatory Networks
40 Citations

Insights into organ-specific pathogen defense responses in plants: RNA-seq analysis of potato tuber-Phytophthora infestans interactions

Gao, L., Tu, Z. J., Millett, B. P. & Bradeen, J. M. May 23 2013 In : BMC Genomics. 14, 1, 340

Research output: Research - peer-reviewArticle

Phytophthora infestans
Plant RNA
Solanum tuberosum
Genes
Transcriptome
37 Citations

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals important Solanum R locus dynamics

Andolfo, G., Sanseverino, W., Rombauts, S., Van de Peer, Y., Bradeen, J. M., Carputo, D., Frusciante, L. & Ercolano, M. R. Jan 2013 In : New Phytologist. 197, 1, p. 223-237 15 p.

Research output: Research - peer-reviewArticle

Solanum lycopersicum
Solanum
tomatoes
loci
pathogens
22 Citations
monoculture
plant community
soil
Streptomyces
plant communities
12 Citations

Rhizosphere bacterial communities associated with long-lived perennial prairie plants vary in diversity, composition, and structure

Rosenzweig, N., Bradeen, J. M., Tu, Z. J., McKay, S. J. & Kinkel, L. L. Jul 15 2013 In : Canadian Journal of Microbiology. 59, 7, p. 494-502 9 p.

Research output: Research - peer-reviewArticle

Rhizosphere
Grassland
Lespedeza
Ecosystem
Andropogon
2012
12 Citations

Evolutionary meta-analysis of solanaceous resistance gene and solanum resistance gene analog sequences and a practical framework for cross-species comparisons

Quirin, E. A., Mann, H., Meyer, R. S., Traini, A., Chiusano, M. L., Litt, A. & Bradeen, J. M. May 1 2012 In : Molecular Plant-Microbe Interactions. 25, 5, p. 603-612 10 p.

Research output: Research - peer-reviewArticle

vpr Genes
Solanum
Meta-Analysis
Genes
meta-analysis
1 Citations

Fertilization fitness and offspring ploidy in 3x × 2x matings in potato

Iorizzo, M., Aversano, R., Bradeen, J. M., Frusciante, L. & Carputo, D. Jun 1 2012 In : Plant Biosystems. 146, 2, p. 317-321 5 p.

Research output: Research - peer-reviewArticle

fertilization (reproduction)
triploidy
ploidy
potatoes
gamete
15 Citations

Implications of Pyrosequencing Error Correction for Biological Data Interpretation

Bakker, M. G., Tu, Z. J., Bradeen, J. M. & Kinkel, L. L. Aug 30 2012 In : PLoS ONE. 7, 8, e44357

Research output: Research - peer-reviewArticle

sampling
Error correction
Processing
Otus
methodology
2011
2 Citations
Solanum bulbocastanum
Solanum
haplotypes
potatoes
genotype
71 Citations

Apple skin patterning is associated with differential expression of MYb10

Telias, A., Lin-Wang, K., Stevenson, D. E., Cooney, J. M., Hellens, R. P., Allan, A. C., Hoover, E. E. & Bradeen, J. M. May 20 2011 In : BMC Plant Biology. 11, 93

Research output: Research - peer-reviewArticle

methylation
apples
promoter regions
anthocyanins
fruits
4 Citations

Disease resistance gene transcription in transgenic potato is unaltered by temperature extremes and plant physiological age

Iorizzo, M., Mollov, D. S., Carputo, D. & Bradeen, J. M. Aug 1 2011 In : European Journal of Plant Pathology. 130, 4, p. 469-476 8 p.

Research output: Research - peer-reviewArticle

disease resistance
transcription (genetics)
genetically modified organisms
potatoes
temperature
8 Citations
juiciness
heritability
apples
texture
fruits
2010

Caracterización de poblaciones de phytophthora infestans (mont, de bary) obtenidas de solanum transgénicas y de híbridos somáticos resistentes

Lozoya-Saldaña, H., Belmar-Díaz, C. R., Bradeen, J. M. & Helgeson, J. P. Oct 1 2010 In : Interciencia. 35, 10, p. 784-788 5 p.

Research output: Research - peer-reviewArticle

Phytophthora infestans
Solanum
genetically modified organisms
clones
genotype
18 Citations

Common scab trials of potato varieties and advanced selections at three U.S. locations

Haynes, K. G., Wanner, L. A., Thill, C. A., Bradeen, J. M., Miller, J., Novy, R. G., Whitworth, J. L., Corsini, D. L. & Vinyard, B. T. Apr 23 2010 In : American Journal of Potato Research. 87, 3, p. 261-276 16 p.

Research output: Research - peer-reviewArticle

tubers
potatoes
clones
germplasm
heritability
21 Citations

Rdr3, a novel locus conferring black spot disease resistance in tetraploid rose: Genetic analysis, LRR profiling, and SCAR marker development

Whitaker, V. M., Bradeen, J. M., Debener, T., Biber, A. & Hokanson, S. C. Jan 1 2010 In : Theoretical and Applied Genetics. 120, 3, p. 573-585 13 p.

Research output: Research - peer-reviewArticle

tetraploidy
disease resistance
genetic techniques and protocols
Rosa
loci
2009
16 Citations

Changes in disease resistance phenotypes associated with plant physiological age are not caused by variation in R gene transcript abundance

Millett, B. P., Mollov, D. S., Iorizzo, M., Carputo, D. & Bradeen, J. M. Mar 1 2009 In : Molecular Plant-Microbe Interactions. 22, 3, p. 362-368 7 p.

Research output: Research - peer-reviewArticle

disease resistance
phenotype
genes
vpr Genes
Disease Resistance
50 Citations

Higher copy numbers of the potato RB transgene correspond to enhanced transcript and late blight resistance levels

Bradeen, J. M., Iorizzo, M., Mollov, D. S., Raasch, J., Kramer, L. C., Millett, B. P., Austin-Phillips, S., Jiang, J. & Carputo, D. Apr 1 2009 In : Molecular Plant-Microbe Interactions. 22, 4, p. 437-446 10 p.

Research output: Research - peer-reviewArticle

Phytophthora infestans
transgenes
potatoes
genes
Solanum tuberosum
22 Citations

The fractionated orthology of Bs2 and Rx/Gpa2 supports shared synteny of disease resistance in the solanaceae

Mazourek, M., Cirulli, E. T., Collier, S. M., Landry, L. G., Kang, B. C., Quirin, E. A., Bradeen, J. M., Moffett, P. & Jahn, M. M. Aug 1 2009 In : Genetics. 182, 4, p. 1351-1364 14 p.

Research output: Research - peer-reviewArticle

Solanaceae
vpr Genes
Synteny
Disease Resistance
Leucine
2007
2 Citations

Culturing and long-term storage of virulent races of the rose blackspot pathogen, diplocarpon rosae wolf

Whitaker, V. M., Zuzek, K., Hokanson, S. C. & Bradeen, J. M. Dec 1 2007 In : Acta Horticulturae. 751, p. 199-206 8 p.

Research output: Research - peer-reviewArticle

Diplocarpon rosae
wolves
Rosa
pathogens
leaves
17 Citations
Phytophthora infestans
transgenes
reverse transcriptase polymerase chain reaction
alleles
assays
11 Citations
Diplocarpon rosae
amplified fragment length polymorphism
Rosa
screening
genetic variation
herbicide resistance
diploidy
potatoes
seedlings
linuron
4 Citations

Resistance traits and AFLP characterization of diploid primitive tuber-bearing potatoes

Aversano, R., Ercolano, M. R., Frusciante, L., Monti, L., Bradeen, J. M., Cristinzio, G., Zoina, A., Greco, N., Vitale, S. & Carputo, D. Dec 1 2007 In : Genetic Resources and Crop Evolution. 54, 8, p. 1797-1806 10 p.

Research output: Research - peer-reviewArticle

amplified fragment length polymorphism
tubers
diploidy
potatoes
Solanum tuberosum
2006
8 Citations

Towards efficient isolation of R gene orthologs from multiple genotypes: Optimization of Long Range-PCR

Sanchez, M. J. & Bradeen, J. M. Feb 1 2006 In : Molecular Breeding. 17, 2, p. 137-148 12 p.

Research output: Research - peer-reviewArticle

vpr Genes
Genotype
Polymerase Chain Reaction
genotype
genes
2003
38 Citations

BIBAC and TAC clones containing potato genomic DNA fragments larger than 100 kb are not stable in Agrobacterium

Song, J., Bradeen, J. M., Naess, S. K., Helgeson, J. P. & Jiang, J. Sep 1 2003 In : Theoretical and Applied Genetics. 107, 5, p. 958-964 7 p.

Research output: Research - peer-reviewArticle

Agrobacterium
potatoes
clones
genomics
DNA
17 Citations

Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB

Bradeen, J. M., Naess, S. K., Song, J., Haberlach, G. T., Wielgus, S. M., Buell, C. R., Jiang, J. & Helgeson, J. P. Aug 1 2003 In : Molecular Genetics and Genomics. 269, 5, p. 603-611 9 p.

Research output: Research - peer-reviewArticle

Physical Chromosome Mapping
Walking
Polymerase Chain Reaction
Clone Cells
Contig Mapping
349 Citations

Gene RB cloned from Solanum bulbocastanum confers broad spectrum resistance to potato late blight

Song, J., Bradeen, J. M., Naess, S. K., Raasch, J. A., Wielgus, S. M., Haberlach, G. T., Liu, J., Kuang, H., Austin-Phillips, S., Buell, C. R., Helgeson, J. P. & Jiang, J. Aug 5 2003 In : Proceedings of the National Academy of Sciences of the United States of America. 100, 16, p. 9128-9133 6 p.

Research output: Research - peer-reviewArticle

Solanum
Solanum tuberosum
Genes
Polymerase Chain Reaction
Phytophthora infestans
2002
43 Citations

Molecular diversity analysis of cultivated carrot (Daucus carota L.) and wild Daucus populations reveals a genetically nonstructured composition

Bradeen, J. M., Bach, I. C., Briard, M., Le Clerc, V., Grzebelus, D., Senalik, D. A. & Simon, P. W. Jan 1 2002 In : Journal of the American Society for Horticultural Science. 127, 3, p. 383-391 9 p.

Research output: Research - peer-reviewArticle

Daucus
Daucus carota
carrots
Population
topology
2001
33 Citations

Analysis of the introgression of Solanum bulbocastanum DNA into potato breeding lines

Naess, S., Bradeen, J., Wielgus, S., Haberlach, G., McGrath, J. & Helgeson, J. Aug 29 2001 In : Molecular Genetics and Genomics. 265, 4, p. 694-704 11 p.

Research output: Research - peer-reviewArticle

Solanum
Solanum tuberosum
Restriction Fragment Length Polymorphisms
Breeding
DNA
62 Citations

Towards an expanded and integrated linkage map of cucumber (Cucumis Sativus L.)

Bradeen, J. M., Staub, J. E., Wye, C., Antonise, R. & Peleman, J. Apr 11 2001 In : Genome. 44, 1, p. 111-119 9 p.

Research output: Research - peer-reviewArticle

Cucumis sativus
cucumbers
chromosome mapping
random amplified polymorphic DNA technique
amplified fragment length polymorphism
2000
97 Citations

Resistance to late blight in Solanum bulbocastanum is mapped to chromosome 8

Naess, S. K., Bradeen, J. M., Wielgus, S. M., Haberlach, G. T., McGrath, J. M. & Helgeson, J. P. Nov 1 2000 In : Theoretical and Applied Genetics. 101, 5-6, p. 697-704 8 p.

Research output: Research - peer-reviewArticle

Solanum
Chromosomes, Human, Pair 8
Restriction Fragment Length Polymorphisms
Solanum bulbocastanum
Phytophthora infestans
1998
97 Citations

A low-density genetic map of onion reveals a role for tandem duplication in the evolution of an extremely large diploid genome

King, J. J., Bradeen, J. M., Bark, O., McCallum, J. A. & Havey, M. J. Jan 1 1998 In : Theoretical and Applied Genetics. 96, 1, p. 52-62 11 p.

Research output: Research - peer-reviewArticle

onions
restriction fragment length polymorphism
diploidy
genome
Onions
97 Citations

Conversion of an AFLP fragment linked to the carrot Y2 locus to a simple, codominant, PCR-based marker form

Bradeen, J. M. & Simon, P. W. Oct 1 1998 In : Theoretical and Applied Genetics. 97, 5-6, p. 960-967 8 p.

Research output: Research - peer-reviewArticle

Daucus carota
Carotenoids
Polymerase Chain Reaction
carrots
amplified fragment length polymorphism
10 Citations
Onions
Restriction Fragment Length Polymorphisms
Population
onions
restriction fragment length polymorphism
1997
3 Citations

Detailed genetic mapping of the Y2 carotenoid locus in carrot

Bradeen, J. M., Vivek, B. S. & Simon, P. W. Dec 1 1997 In : Journal of Applied Genetics. 38 A, p. 28-32 5 p.

Research output: Research - peer-reviewArticle

Daucus carota
Carotenoids
Alleles
Polymerase Chain Reaction
Phloem
11 Citations

Dynamic genome organization and gene evolution by positive selection in geminivirus (Geminiviridae)

Bradeen, J. M., Timmermans, M. C. P. & Messing, J. Jan 1 1997 In : Molecular Biology and Evolution. 14, 11, p. 1114-1124 11 p.

Research output: Research - peer-reviewArticle

Geminiviridae
genome
genes
protein
gene