Projects per year
Personal profile
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 3 Good Health and Well-being -
SDG 13 Climate Action
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The Fingerprint is created by mining the titles and abstracts of the person's research outputs and projects/funding awards to create an index of weighted terms from discipline-specific thesauri.
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Collaborations and top research areas from the last five years
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Projects
- 2 Finished
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RAISE: A Materials Science Gateway for X-ray Imaging and Modeling of Microstructures
Johnson, J. E. (PI) & Vinals, J. (PI)
THE NATIONAL SCIENCE FOUNDATION
8/1/20 → 7/31/23
Project: Research project
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A Galaxy-based multi-omic informatics hub for cancer res
Griffin, T. J. (PI), Baller, J. A. (CoI), Hegeman, A. D. (CoI), Jagtap, P. D. (CoI), Johnson, J. E. (Other Role), Lynch, B. J. (Other Role) & Wennblom, T. (Other Role)
5/18/16 → 4/30/21
Project: Research project
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Comparative performance of Scribe and database search engines in metaproteomic profiling of a ground-truth microbiome dataset
Rajczewski, A. T., Mehta, S., Wagner, R., Gabriel, W., Johnson, J., Do, K., Vintila, S., Wilhelm, M., Kleiner, M., Searle, B. C., Griffin, T. J. & Jagtap, P. D., Jan 6 2026, In: Journal of Proteomics. 322, 105549.Research output: Contribution to journal › Article › peer-review
Open Access -
iPepGen: a modular, immunopeptidogenomic analysis pipeline for discovery, verification, and prioritization of cancer peptide neoantigen candidates
Mehta, S., Wagner, R., Do, K. T., Johnson, J. E., Yu, F., Jubenville, T., Richards, K., Coleman, S., Popescu, F. E., Nesvizhskii, A. I., Largaespada, D. A., Jagtap, P. D. & Griffin, T. J., Dec 2026, In: Genome biology. 27, 1, 111.Research output: Contribution to journal › Article › peer-review
Open Access -
Discovering Novel Proteoforms Using Proteogenomic Workflows Within the Galaxy Bioinformatics Platform
Kumar, P., Johnson, J. E., McGowan, T., Chambers, M. C., Heydarian, M., Mehta, S., Easterly, C., Griffin, T. J. & Jagtap, P. D., 2025, Methods in Molecular Biology. Humana Press Inc., p. 109-128 20 p. (Methods in Molecular Biology; vol. 2859).Research output: Chapter in Book/Report/Conference proceeding › Chapter
1 Link opens in a new tab Scopus citations -
Techniques for Validating CRISPR Changes Using RNA-Sequencing Data
Rathe, S. K., Marko, T. A., Edwards, E. N., Ridder, P. H., Varshney, J., Williams, K. B., Johnson, J. E., Moriarity, B. S. & Largaespada, D. A., Apr 2025, In: Genes. 16, 4, 369.Research output: Contribution to journal › Article › peer-review
Open Access -
An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease
Kruk, M. E., Mehta, S., Murray, K., Higgins, L. A., Do, K., Johnson, J. E., Wagner, R., Wendt, C. H., O’Connor, J. B., Harris, J. K., Laguna, T. A., Jagtap, P. D. & Griffin, T. J., Jul 2024, In: mSystems. 9, 7Research output: Contribution to journal › Article › peer-review
Open Access7 Link opens in a new tab Scopus citations